BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0345.0038.p (170 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KLC4.1 B3KLC4_9BACI Putative uncharacterized protein 234 2e-60 B1DL08.1 B1DL08_9BACL Putative uncharacterized protein 206 7e-52 B2J4Q1.1 B2J4Q1_NOSP7 Putative uncharacterized protein 180 3e-44 B4BPX6.1 B4BPX6_9BACI Putative uncharacterized protein 177 3e-43 A4IRY9.1 A4IRY9_GEOTN Putative uncharacterized protein 176 5e-43 >B3KLC4.1 B3KLC4_9BACI Putative uncharacterized protein Length = 335 Score = 234 bits (597), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 113/159 (71%), Positives = 130/159 (81%), Gaps = 1/159 (0%) Query: 6 LNEFEQGRYLSPRGPIGLMSRVYKYVLPEVRECLHFWRQDAEGIPDPELRKQALASIETK 65 +N E R + PR P+GLMSRVYK++LPEVR L WR++AE IPD ELRKQALASI+TK Sbjct: 1 MNNQELSRKV-PRSPVGLMSRVYKFILPEVRSELEKWRREAEQIPDEELRKQALASIDTK 59 Query: 66 EFHCQGGGIYAAGNLSMRHILIPLIVAYQTISDYLDNLCDRSTSLDPADFRLLHQSMLDA 125 FHCQGG +YAA NL +HILIPLIVAYQTISDYLDNLCDRSTSLDPADFR LHQSMLDA Sbjct: 60 RFHCQGGAVYAAANLPEKHILIPLIVAYQTISDYLDNLCDRSTSLDPADFRQLHQSMLDA 119 Query: 126 INPKAEPVNYYALRSEQNDGGYLHRLVRKCQEMTALLPG 164 + P+ EP +YYALRSE+ DGGYL RLV+KC++ L G Sbjct: 120 VTPEMEPADYYALRSEREDGGYLLRLVQKCRDCIGQLSG 158 >B1DL08.1 B1DL08_9BACL Putative uncharacterized protein Length = 360 Score = 206 bits (524), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 100/148 (67%), Positives = 116/148 (78%) Query: 17 PRGPIGLMSRVYKYVLPEVRECLHFWRQDAEGIPDPELRKQALASIETKEFHCQGGGIYA 76 P P+ LM RVYKY+LPEV L R+ AE IPDPELR QAL S+++K+FHCQGG IYA Sbjct: 12 PERPLKLMHRVYKYILPEVNIELRKLRRLAEQIPDPELRLQALQSMDSKKFHCQGGAIYA 71 Query: 77 AGNLSMRHILIPLIVAYQTISDYLDNLCDRSTSLDPADFRLLHQSMLDAINPKAEPVNYY 136 + NL R++LIPLIVA QTISDYLDNLCDRSTSLDP DFRLLHQSMLDA++P A +YY Sbjct: 72 SMNLDERYVLIPLIVALQTISDYLDNLCDRSTSLDPDDFRLLHQSMLDAVDPSAVVKDYY 131 Query: 137 ALRSEQNDGGYLHRLVRKCQEMTALLPG 164 ALR E+NDGGYLH LV CQ ++LP Sbjct: 132 ALRQERNDGGYLHHLVNLCQHCVSMLPS 159 >B2J4Q1.1 B2J4Q1_NOSP7 Putative uncharacterized protein Length = 381 Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 90/150 (60%), Positives = 107/150 (71%), Gaps = 4/150 (2%) Query: 17 PRGPIGLMSRVYKYVLPEVRECLHFWRQDAEGIPDPELRKQALASIETKEFHCQGGGIYA 76 P LM R+Y VLP VR+ L FW+++AE IP+PELRKQAL SI TK FHC+GG IY Sbjct: 28 PSNSGMLMLRIYCDVLPRVRKHLEFWKKNAEQIPNPELRKQALLSIRTKTFHCEGGSIY- 86 Query: 77 AGNLSMRHI--LIPLIVAYQTISDYLDNLCDRSTSLDPADFRLLHQSMLDAINPKAEPVN 134 G L+ I +I IVAYQTISDYLDNLCDRS SLDP DFR LHQ+ LDA+ P A+ +N Sbjct: 87 -GLLAKEEIEPIICFIVAYQTISDYLDNLCDRSNSLDPKDFRTLHQACLDALTPSAKCIN 145 Query: 135 YYALRSEQNDGGYLHRLVRKCQEMTALLPG 164 YY R EQ+DGGYL +LV+ CQ + LP Sbjct: 146 YYQFRQEQDDGGYLMKLVKTCQNVLRQLPS 175 >B4BPX6.1 B4BPX6_9BACI Putative uncharacterized protein Length = 360 Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 91/144 (63%), Positives = 98/144 (68%) Query: 17 PRGPIGLMSRVYKYVLPEVRECLHFWRQDAEGIPDPELRKQALASIETKEFHCQGGGIYA 76 P PI LM VY+ V P V L +WRQ AE IPDPELR+QALASI +K FHC+GG I A Sbjct: 4 PTHPIALMKMVYRDVFPLVHRELSYWRQRAERIPDPELRRQALASIASKTFHCEGGAILA 63 Query: 77 AGNLSMRHILIPLIVAYQTISDYLDNLCDRSTSLDPADFRLLHQSMLDAINPKAEPVNYY 136 I IVAYQTISDYLDNLCDRSTSLDP DFR LH SM DA+ AEP NYY Sbjct: 64 LLAREKLEACIRFIVAYQTISDYLDNLCDRSTSLDPLDFRALHDSMSDALTIGAEPSNYY 123 Query: 137 ALRSEQNDGGYLHRLVRKCQEMTA 160 R EQ DGGYL LVR CQE+ A Sbjct: 124 RYRREQEDGGYLPDLVRTCQEVLA 147 >A4IRY9.1 A4IRY9_GEOTN Putative uncharacterized protein Length = 360 Score = 176 bits (447), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 91/144 (63%), Positives = 98/144 (68%) Query: 17 PRGPIGLMSRVYKYVLPEVRECLHFWRQDAEGIPDPELRKQALASIETKEFHCQGGGIYA 76 P PI LM VY+ V P V L +WRQ AE IPDPELR+QALASI +K FHC+GG I A Sbjct: 4 PTHPIALMKMVYRDVFPLVHRELSYWRQRAERIPDPELRRQALASIASKTFHCEGGAILA 63 Query: 77 AGNLSMRHILIPLIVAYQTISDYLDNLCDRSTSLDPADFRLLHQSMLDAINPKAEPVNYY 136 I IVAYQTISDYLDNLCDRSTSLDP DFR LH SM DA+ AEP NYY Sbjct: 64 LLAREKLEACIRFIVAYQTISDYLDNLCDRSTSLDPLDFRALHDSMPDALTIGAEPSNYY 123 Query: 137 ALRSEQNDGGYLHRLVRKCQEMTA 160 R EQ DGGYL LVR CQE+ A Sbjct: 124 RYRREQEDGGYLPDLVRTCQEVLA 147 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.139 0.422 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,023,323,693 Number of extensions: 40071150 Number of successful extensions: 71225 Number of sequences better than 1.0e-05: 109 Number of HSP's gapped: 71140 Number of HSP's successfully gapped: 109 Length of query: 170 Length of database: 3,060,696,203 Length adjustment: 126 Effective length of query: 44 Effective length of database: 1,873,648,313 Effective search space: 82440525772 Effective search space used: 82440525772 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 126 (53.1 bits)