BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0345.0031.p
         (67 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KLC8.1 B3KLC8_9BACI Putative uncharacterized protein                102   9e-21
B1DL41.1 B1DL41_9BACL Putative uncharacterized protein                 74   4e-12

>B3KLC8.1 B3KLC8_9BACI Putative uncharacterized protein
          Length = 64

 Score =  102 bits (255), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 46/63 (73%), Positives = 56/63 (88%)

Query: 4  VEMETVKLSAIVMRWYPDMIPFLKQDELNSVIVLRDGLSILEPEDAMDIIHYSICEHQNS 63
          +EMETVKLS IVM+W+P+MIPF +Q+ELNS+IVLRDGLSILE EDA++II +SICEHQN 
Sbjct: 1  MEMETVKLSQIVMKWFPEMIPFFRQNELNSMIVLRDGLSILEQEDALEIIQFSICEHQNQ 60

Query: 64 AYL 66
            L
Sbjct: 61 TPL 63


>B1DL41.1 B1DL41_9BACL Putative uncharacterized protein
          Length = 62

 Score = 73.9 bits (180), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 36/62 (58%), Positives = 45/62 (72%)

Query: 6  METVKLSAIVMRWYPDMIPFLKQDELNSVIVLRDGLSILEPEDAMDIIHYSICEHQNSAY 65
          METV LS IV +  P++  FL + EL   IVLRDGL++LEPEDA +I+ +SICEHQ  A 
Sbjct: 1  METVTLSQIVEKLAPELSSFLTKRELAINIVLRDGLAVLEPEDAREIVQHSICEHQIQAL 60

Query: 66 LQ 67
          LQ
Sbjct: 61 LQ 62


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.323    0.138    0.402 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 364,567,834
Number of extensions: 10771654
Number of successful extensions: 23914
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 23914
Number of HSP's successfully gapped: 2
Length of query: 67
Length of database: 3,060,696,203
Length adjustment: 39
Effective length of query: 28
Effective length of database: 2,693,276,618
Effective search space: 75411745304
Effective search space used: 75411745304
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 125 (52.8 bits)