BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0345.0018.p
         (155 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KLE2.1 B3KLE2_9BACI Mov34/MPN/PAD-1 family protein                   79   1e-13

>B3KLE2.1 B3KLE2_9BACI Mov34/MPN/PAD-1 family protein
          Length = 177

 Score = 79.0 bits (193), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 2/119 (1%)

Query: 5   QGNLQPIKLNASVQQALGKHMLTCYPHEACXXXX--XXXXXXXMRIDRYLPMRNVAPDPL 62
             +L+ + L  +V++ +  HM    P EAC             + + +++P++N A  PL
Sbjct: 5   HASLERLLLREAVKEHMSDHMHHRLPEEACGVLIGHADEASRSITVTQFIPVKNTAEFPL 64

Query: 63  HAFVPDPQEWVAALYLKPAPVGIFHSHPHTAPWPSSADIRGLSSLGAEFQVYLIGSPGL 121
           H+F  DP +W   +  +   VG+FHSHPHT P PS  D+  L S G   +VY I SP +
Sbjct: 65  HSFHLDPVQWTRLVLAEKGIVGLFHSHPHTTPDPSGEDLLQLQSFGGLLRVYAIASPAV 123


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.321    0.138    0.442 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 871,623,558
Number of extensions: 34572544
Number of successful extensions: 64225
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 64412
Number of HSP's successfully gapped: 1
Length of query: 155
Length of database: 3,060,696,203
Length adjustment: 116
Effective length of query: 39
Effective length of database: 1,967,858,463
Effective search space: 76746480057
Effective search space used: 76746480057
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 126 (53.1 bits)