BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0345.0003.p (359 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KHI6.1 B3KHI6_9BACI Glycosyl transferase group 1 567 e-160 B1DBL8.1 B1DBL8_9BACL Glycosyl transferase group 1 497 e-139 Q3AB50.1 Q3AB50_CARHZ Glycosyltransferase, group 1 family 137 1e-30 A3DIX2.1 A3DIX2_CLOTH Polysaccharide pyruvyl transferase 126 4e-27 Q5JGT2.1 Q5JGT2_PYRKO Glycosyltransferase, family 4 124 2e-26 >B3KHI6.1 B3KHI6_9BACI Glycosyl transferase group 1 Length = 378 Score = 567 bits (1461), Expect = e-160, Method: Compositional matrix adjust. Identities = 263/355 (74%), Positives = 314/355 (88%) Query: 1 MIPYLQERFRSSRWDMDLFWLPKRIRGKGREEVSFETFDWTLYGESPVVQKYIQTYKDYI 60 MIPYLQERF SSRW+M++FWLPKRIR KG+E+ F TFDW + SP+V KY+QTY+DY+ Sbjct: 20 MIPYLQERFHSSRWEMEMFWLPKRIRNKGQEDPIFHTFDWREFEGSPIVAKYLQTYRDYL 79 Query: 61 WWTKLRMSKNYDLIHAHHPIAGLAMKRIYPGVPLIQTLHSSYERELILNGVILEGGPEHQ 120 WWT+LR+ K YDLIH+HHPIAG++MK ++P VPLIQT+HSSYERELILNG I EGG EH+ Sbjct: 80 WWTRLRIQKPYDLIHSHHPIAGMSMKAVFPEVPLIQTVHSSYERELILNGRIKEGGLEHR 139 Query: 121 FLVSIYRELEHVSDRLMTVSRSFADYLAPYIDRPDRIGVIPNGFDEKRFKPVPHDNDIPQ 180 FLVS+Y+ELEH+SDRL+TVS SF Y++PY++ P+ IGVI NGFD+KRFKPVPH+N +PQ Sbjct: 140 FLVSLYKELEHISDRLLTVSNSFKAYMSPYVNTPESIGVIHNGFDDKRFKPVPHENAVPQ 199 Query: 181 LVTVTRLVPAKGIDTLFKACAELKKRNHEYVLHIIGDGPSRAELEHLAQSLGIYNETIFY 240 L+TV RLVPAKG+D L +ACAELK++ ++YVLHIIGDGPSR ELE +A++LGIY ETIFY Sbjct: 200 LITVCRLVPAKGLDILLQACAELKRKGYDYVLHIIGDGPSRQELEEMAKTLGIYQETIFY 259 Query: 241 GYTLHPEEFMPFFDIFVLPSRAEAFGSVFAEAALSCLALVGTNVGGIPEQIEDGVNGLLV 300 GYTLHPEEFMPFFDIFVLPSRAEAFGSVFAEAALSCLALVGT+VGGI EQIEDGVNGLLV Sbjct: 260 GYTLHPEEFMPFFDIFVLPSRAEAFGSVFAEAALSCLALVGTDVGGIAEQIEDGVNGLLV 319 Query: 301 DPDDEVALADALEKVISDPGYRYELSRSAWDKAKSLYSLTRVANELKKTYLQYQP 355 P+D +AL+ ALEKVISDP YRYEL+R+A DKAK+ YSL+R NELKK YL++QP Sbjct: 320 PPEDPMALSVALEKVISDPLYRYELARTASDKAKNQYSLSRSVNELKKMYLKFQP 374 >B1DBL8.1 B1DBL8_9BACL Glycosyl transferase group 1 Length = 376 Score = 497 bits (1280), Expect = e-139, Method: Compositional matrix adjust. Identities = 234/355 (65%), Positives = 281/355 (79%) Query: 1 MIPYLQERFRSSRWDMDLFWLPKRIRGKGREEVSFETFDWTLYGESPVVQKYIQTYKDYI 60 M+PY+QERF W M+LF LPKR+RGKG+E++ FETFD T + P+V KY+QT +DYI Sbjct: 20 MVPYIQERFLKLGWQMELFSLPKRVRGKGQEDIIFETFDVTPFLGDPIVDKYLQTMRDYI 79 Query: 61 WWTKLRMSKNYDLIHAHHPIAGLAMKRIYPGVPLIQTLHSSYERELILNGVILEGGPEHQ 120 WWT+LR+ ++YD+IHAHHPIA L MK+++P P++ T+HSS+EREL+LNG I E H+ Sbjct: 80 WWTRLRLKRSYDIIHAHHPIAALVMKQLFPDTPVMMTIHSSFERELVLNGKIEENSIAHR 139 Query: 121 FLVSIYRELEHVSDRLMTVSRSFADYLAPYIDRPDRIGVIPNGFDEKRFKPVPHDNDIPQ 180 FL SIY ELE DRL+TVS SF YL+PY+ I VIPNGFDEKRFKP+ H+N +PQ Sbjct: 140 FLTSIYGELEAKLDRLLTVSDSFRTYLSPYMKDTSAIKVIPNGFDEKRFKPIAHENAVPQ 199 Query: 181 LVTVTRLVPAKGIDTLFKACAELKKRNHEYVLHIIGDGPSRAELEHLAQSLGIYNETIFY 240 +TV RLVPAKG+D L ACAELK R H +VLHIIGDGP R ELE LA L +Y++ IFY Sbjct: 200 FITVCRLVPAKGLDILLHACAELKHRGHPFVLHIIGDGPIREELEQLAVELDLYDDIIFY 259 Query: 241 GYTLHPEEFMPFFDIFVLPSRAEAFGSVFAEAALSCLALVGTNVGGIPEQIEDGVNGLLV 300 GY LHPEEFMPFFD+FVLPSRAEAFGSVFAEAAL LALVGTNVGGI EQIEDGVNGLLV Sbjct: 260 GYMLHPEEFMPFFDVFVLPSRAEAFGSVFAEAALCWLALVGTNVGGIAEQIEDGVNGLLV 319 Query: 301 DPDDEVALADALEKVISDPGYRYELSRSAWDKAKSLYSLTRVANELKKTYLQYQP 355 P+D ALADALEK++ DP YRY L+RS WDKAK +YSL RV +++KK YL +P Sbjct: 320 PPEDAPALADALEKLVVDPTYRYNLARSGWDKAKKVYSLQRVISQMKKVYLSLKP 374 >Q3AB50.1 Q3AB50_CARHZ Glycosyltransferase, group 1 family Length = 369 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 98/287 (34%), Positives = 145/287 (50%), Gaps = 14/287 (4%) Query: 69 KNYDLIHAHHPIAGLA--MKRIYPGVPLIQTLHSSYERELILNGVILEGGPEHQFLVSIY 126 + Y ++H H A LA M GVP++ T+H+S E + + +FL Y Sbjct: 87 EGYRIVHCHGFKAALAGRMAAFLAGVPVVYTVHNSIWHENVAAFKRIIASLIERFLTKFY 146 Query: 127 RELEHVSDRLMTVSRSFA-DYLAPYIDRPDRIGVIPNGFD-EKRFKPVPHDNDIPQLV-T 183 + +++ VS + + + + ++I VIPNG + + K PH P ++ T Sbjct: 147 ------THKVIAVSENLKKELILKHGVLAEKITVIPNGVEIPEEIKTNPHQ---PVVIGT 197 Query: 184 VTRLVPAKGIDTLFKACAELKKRNHEYVLHIIGDGPSRAELEHLAQSLGIYNETIFYGYT 243 + R P KG++ L KA A L R + I GDGP + EL+ LA+ LGI + F GY Sbjct: 198 LARFAPQKGLNYLLKALALLSNRGVVFRAIIGGDGPLKNELKELAKELGIESLVTFPGYI 257 Query: 244 LHPEEFMPFFDIFVLPSRAEAFGSVFAEAALSCLALVGTNVGGIPEQIEDGVNGLLVDPD 303 +P EF DIFVLPS +E EA LA++ TNVGGIPE I G NGLLV P Sbjct: 258 PNPAEFYREIDIFVLPSISEGLPLSLLEAMSWKLAVIATNVGGIPEVINSGENGLLVPPK 317 Query: 304 DEVALADALEKVISDPGYRYELSRSAWDKAKSLYSLTRVANELKKTY 350 D AL +AL +I + +R L A+ + Y++ +A ++ Y Sbjct: 318 DATALTEALYTLIFNENFRLSLGERAYITIREKYNVAHMAQRNEEIY 364 >A3DIX2.1 A3DIX2_CLOTH Polysaccharide pyruvyl transferase Length = 745 Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 91/293 (31%), Positives = 138/293 (47%), Gaps = 32/293 (10%) Query: 71 YDLIHAHHPIAGLA---MKRIYPGVPLIQTLHSSYERELILNGVILEGGPEHQFLVSIYR 127 Y+LIH+H A + +KR+ G+P++ T+HS Y + + N F + + Sbjct: 77 YELIHSHGAKANMIAVLVKRL-TGLPVVTTVHSDYRLDYLQN----------IFKMFSFG 125 Query: 128 ELEHVSDRLM----TVSRSFADYLAPYIDRPDRIGVIPNGFD-EKRFKPVPHD------- 175 + VS R + VS++F L P I + NG + + P+P + Sbjct: 126 LINMVSLRFIDFHIAVSKNFKTMLIERKFSPQNIFTVYNGINFNQEINPLPKEEFLKKYN 185 Query: 176 -----NDIPQLVTVTRLVPAKGIDTLFKACAELKKRNHEYVLHIIGDGPSRAELEHLAQS 230 ND+ + + RL P KG+DT KA + K N I GDGP R LE A S Sbjct: 186 LKFGENDVI-IGILARLDPVKGLDTFLKAANAVIKTNPTARFLIAGDGPERKSLEKKAAS 244 Query: 231 LGIYNETIFYGYTLHPEEFMPFFDIFVLPSRAEAFGSVFAEAALSCLALVGTNVGGIPEQ 290 G+ N F G+ P +F+ DI L S +E+F E +L A + +NVGGI + Sbjct: 245 YGLQNNVFFLGFVNKPYDFLNSIDINTLTSLSESFPYAILEGSLLKKATISSNVGGISDL 304 Query: 291 IEDGVNGLLVDPDDEVALADALEKVISDPGYRYELSRSAWDKAKSLYSLTRVA 343 IE G+NG L +P D LA + +I+DP R ++ +KA S +SL + Sbjct: 305 IESGINGFLFEPGDYETLAGHILTLINDPALRKKMGEKIHEKASSHFSLDNMC 357 >Q5JGT2.1 Q5JGT2_PYRKO Glycosyltransferase, family 4 Length = 384 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 96/303 (31%), Positives = 155/303 (51%), Gaps = 35/303 (11%) Query: 70 NYDLIHAHHPIAGLAMKRIYPGVPL----IQTLHS-SYERELILNGVILEGGPEHQFLVS 124 ++D++HAHH L++K + G L + T HS S+ E L + P L++ Sbjct: 88 DFDVVHAHHAFTPLSLKAVKAGRTLEKATLLTTHSISFSHESSLWKALGLTFP----LLN 143 Query: 125 IYRELEHVSDRLMTVSRSFADYLAPYIDRPDRIGVIPNGFDEKRFKPVPH---------- 174 Y + H ++ VS++ ++ + D P R VIPNG D++RF+P+ + Sbjct: 144 HYLKYPH---EIIAVSKAAKAFVEHFTDSPVR--VIPNGVDDERFRPLSNKERELVREEL 198 Query: 175 --DNDIPQLVTVTRLVPAKGIDTLFKACAELKKRNHEYVLHIIGDGPSRAELEHLAQSLG 232 + D+ ++ V+R+ KG L A + + + L ++G G L+ A+ LG Sbjct: 199 GINGDL--ILYVSRMSFRKGPHVLLNAFQNIAREKEDVTLVMVGSGEMLPFLKAQAKFLG 256 Query: 233 IYNETIFYGYTLHPEEFMPFF----DIFVLPSR-AEAFGSVFAEAALSCLALVGTNVGGI 287 I + F GY P+ +P D+FVL S AEAFG V EA S + +V T VGGI Sbjct: 257 IEDHVRFMGYV--PDGLLPKLYASADVFVLSSTTAEAFGIVVLEAMASGIPVVTTTVGGI 314 Query: 288 PEQIEDGVNGLLVDPDDEVALADALEKVISDPGYRYELSRSAWDKAKSLYSLTRVANELK 347 PE +++ +G+LV P DE ALA+A+ K++SD G + + ++ YS VA E++ Sbjct: 315 PEVVKESESGILVPPGDEAALAEAVLKLLSDKGLAKKFGEAGRKAVETCYSWKVVAGEIE 374 Query: 348 KTY 350 K Y Sbjct: 375 KVY 377 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.140 0.427 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,329,254,987 Number of extensions: 102513239 Number of successful extensions: 254834 Number of sequences better than 1.0e-05: 5383 Number of HSP's gapped: 252390 Number of HSP's successfully gapped: 5385 Length of query: 359 Length of database: 3,060,696,203 Length adjustment: 137 Effective length of query: 222 Effective length of database: 1,770,017,148 Effective search space: 392943806856 Effective search space used: 392943806856 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 132 (55.5 bits)