BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0342.0051.p (478 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A8RJ77.1 A8RJ77_9CLOT Putative uncharacterized protein 301 9e-80 C5ESZ0.1 C5ESZ0_9FIRM Putative uncharacterized protein 251 9e-65 C5EJZ5.1 C5EJZ5_9FIRM Putative uncharacterized protein 239 4e-61 B9CNS5.1 B9CNS5_9ACTN Putative dipeptidase 196 4e-48 A4EAN6.1 A4EAN6_9ACTN Putative uncharacterized protein 196 6e-48 >A8RJ77.1 A8RJ77_9CLOT Putative uncharacterized protein Length = 466 Score = 301 bits (771), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 178/474 (37%), Positives = 253/474 (53%), Gaps = 23/474 (4%) Query: 13 ISEFLEANQENMIEDAKGLIRIRSVGLDYQPGSTQ-PFGEGCRTVLDEAIRLMQREKLEV 71 + E++ + +ENM++ A L++IRSV +PG+ + P+GEGC VLD+A+ + ++ E Sbjct: 3 VKEWVLSQRENMLDTAMELMKIRSVS---EPGTREHPYGEGCAMVLDKALEIGKQMGFET 59 Query: 72 TDFDGYGVKGALAASERGS-IGFFAHLDVVPEGEGWSFPPYDPFVWDGFLWGRGAMDNXX 130 + D Y L G IG F HLDVV EG GW+ PY P + DG+L+GRG+ DN Sbjct: 60 ENHD-YRCGSILMPGRTGQEIGIFVHLDVVHEGNGWTTEPYKPVIKDGWLYGRGSADNKG 118 Query: 131 XXXXXXXXXXXXXESRLPLRHGLYLFLGCNEENGMRDIRHFLSRHEPPLFGIVPDAYFPL 190 E +PL H + L+LGC+EE GM DI ++ S + P F PDA FP+ Sbjct: 119 PAAAALYSMKYLKEQEVPLEHTIRLYLGCSEERGMEDIEYYTSHYPAPEFSFTPDASFPV 178 Query: 191 CFAEKGMLRADFEGEAADGNLLAFNGGTEYNVVPAAASAILRDVDPDHARQVL-----PG 245 C+ EKG+L +F +G++ F+ G N VPA A L D R + P Sbjct: 179 CYGEKGILEGEFSCAIPEGHVTGFSAGVASNAVPAEARVWLSRTSCDAVRDYVDSLDNPQ 238 Query: 246 SFTVEVLPEGVRITASGKAGHAAFPEGTDNXXXXXXXXXXXHGLVRG----SRTLRALAF 301 FTVE + + I A+GK HAAFPEG+D+ H L + F Sbjct: 239 DFTVEGGSQ-IVIKAAGKTAHAAFPEGSDS-----AAVKLAHMLAKAPFLTEEEQACFRF 292 Query: 302 VQECFANPYGHGLGIAFRD-VSGE-TTVNAAVQMENGRLRLLCDIRYGVTQEIGGIQQLL 359 + + FA+ YG G+GIAF D +SG T V + E GR +IRY VT + + + Sbjct: 293 LDQGFADYYGEGMGIAFEDGLSGRLTLVGGMARTERGRFIQNFNIRYPVTAGAEALVKQM 352 Query: 360 EEAANRYGMQLTRTEDSPPHYIAPDDPIAAALCDLANRELGTSQPPYAMGGITHARWLPR 419 A +YG L + D+PP I P+ P+ L L + LGT Y+MGG T+AR LP Sbjct: 353 SAQAGKYGWILDWSRDNPPCVIDPESPVVKELTALCRQVLGTETKAYSMGGGTYARKLPN 412 Query: 420 AAAFGPLRRDKPSPFPAGRGSGHQPDEAMNLEAVWDAFLIYVKAVLVIDGLLSE 473 A AFGP R + P P G G GHQPDE + +E + +A +IY++A+ +D L+ E Sbjct: 413 AVAFGPGIRGQKKPCPPGHGGGHQPDECVKIENLTNAMVIYIEALKRLDVLIGE 466 >C5ESZ0.1 C5ESZ0_9FIRM Putative uncharacterized protein Length = 472 Score = 251 bits (642), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 158/467 (33%), Positives = 240/467 (51%), Gaps = 14/467 (2%) Query: 13 ISEFLEANQENMIEDAKGLIRIRSVGLDYQPGSTQPFGEGCRTVLDEAIRLMQREKLEVT 72 I +++E N+E ++D L+ + S+ + T P+G+ C VLDE L +V Sbjct: 12 IDQWIEKNKEAFVKDLDRLVAVPSISV--HGDDTYPYGKECGRVLDEMTALAAGYGFQVK 69 Query: 73 DFDGYG----VKGALAASERGSIGFFAHLDVVPEGEGWSFPPYDPFVWDGFLWGRGAMDN 128 + + + VKG + R IG +AHLDVVP GEGW PP DGFL GRG DN Sbjct: 70 NHEYHCGSLLVKGTGDSPRR--IGIYAHLDVVPLGEGWHNPPLKCTQKDGFLIGRGVGDN 127 Query: 129 XXXXXXXXXXXXXXXESRLPLRHGLYLFLGCNEENGMRDIRHFLSRHEPPLFGIVPDAYF 188 E + L++ + ++ G +EE GM+DI +F + P F +V D F Sbjct: 128 KGPGICALYALRYLKEHGIELKNDVLVYYGLSEETGMQDIEYFCRTQQVPDFNLVADTNF 187 Query: 189 PLCFAEKGMLRADFEGEAADGNLLAFNGGTEYNVVPAAASAILRDVDPDHARQVLPG--S 246 P+C+ EKG++RAD E +GNL++F+GG+ NV+P A A++ V + AR+ L Sbjct: 188 PVCYGEKGLMRADIE-RKIEGNLVSFHGGSVVNVIPPKAEAVISGVSLEAAREKLGDIEG 246 Query: 247 FTVEVLPEGVRITASGKAGHAAFPEGTDNXXXXXXXXXXXHGLVRGSRTLRALAFVQECF 306 +V+ E V++TA G + HAAFPEG+ N GL+ GS + V Sbjct: 247 ISVDRDGESVKVTALGISRHAAFPEGSVNAIQELSKALAGSGLLTGSAA-HGVKAVAAMT 305 Query: 307 ANPYGHGLGIAFRDV-SGE-TTVNAAVQMENGRLRLLCDIRYGVTQEIGGIQQLLEEAAN 364 ++ YG GI F D SG T V + + ++G +++ D RY VT + + ++ A Sbjct: 306 SDYYGESCGIPFEDKESGRLTCVGSVIHAQDGVMKVSFDTRYPVTVDGDEVVDGFKKRAE 365 Query: 365 RYGMQLTRTEDSPPHYIAPDDPIAAALCDLANRELGTSQPPYAMGGITHARWLPRAAAFG 424 G ++ E S P Y+ D+P L ++ + G PY MGG T++R LP A FG Sbjct: 366 SLGFAVSVGELSAPAYVPLDNPYIPVLSEICDCVQGKHYEPYTMGGGTYSRHLPCAIGFG 425 Query: 425 PLRRDKPSPFPAGRGSGHQPDEAMNLEAVWDAFLIYVKAVLVIDGLL 471 P D P+PF G G GHQPDE + + + Y+ ++L +D +L Sbjct: 426 PGVPDAPNPFENGHGQGHQPDECVPFDMLLKGLKTYIISLLELDCML 472 >C5EJZ5.1 C5EJZ5_9FIRM Putative uncharacterized protein Length = 471 Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 155/466 (33%), Positives = 230/466 (49%), Gaps = 15/466 (3%) Query: 4 ISSQELDRCISEFLEANQENMIEDAKGLIRIRSVGLDYQPGSTQPFGEGCRTVLDEAIRL 63 ++ QEL R F+EAN E++I+D K ++ I SV + + G+ PFG R LD+A+ + Sbjct: 8 MTEQELLRKADAFIEANMEDIIKDIKAVVDIPSVKSEAETGA--PFGREIRRALDKALEI 65 Query: 64 MQREKLEVTDFDGYGVKGALAASERGSIGFFAHLDVVPEGEGWSFPPYDPFVWDGFLWGR 123 R + + + Y L + IG AHLDVVP G GW+ PYD V DG+L GR Sbjct: 66 AGRMGFKTVNCEDYLGYAELPGEKEAYIGTIAHLDVVPAGNGWNTDPYDMVVKDGYLMGR 125 Query: 124 GAMDNXXXXXXXXXXXXXXXESRLPLRHGLYLFLGCNEENGMRDIRHFLSRHEPPLFGIV 183 G +DN + PL + L + GC+EE+GM D+ +++ +E P+F Sbjct: 126 GVVDNKGPLILTYYMGKFFKDLGTPLPYSLRMMAGCDEESGMEDVEYYIHHYEEPVFLFT 185 Query: 184 PDAYFPLCFAEKGMLRADF-EGEAADGNLLAFNGGTEYNVVPAAASAILRDVDPDHARQV 242 PD+ FPLC EKG L +F G DG ++ F GG +N V ASA++R +P+ + Sbjct: 186 PDSEFPLCNGEKGCLCGNFTSGRFEDGAIMDFQGGMAHNAVADQASAVIR-ANPEQCPEA 244 Query: 243 LPGSFTVEVLPEGVRITASGKAGHAAFPEGTDNXXXXXXXXXXXHGLVRG--SRTLRALA 300 TV + GVRI A+G GHA+ EGT N + LV + L+ ++ Sbjct: 245 --DRITVTAVDGGVRIEAAGIGGHASHAEGTINAIGLIADYLLDNSLVTKEEEKFLKVVS 302 Query: 301 FVQECFANPYGHGLGIAFRD--VSGETTVNAAVQMENGRLRLLCDIRYGVTQEIGGIQQL 358 + E + GHGLGI D + + ++ME+G L+ D RY + + Sbjct: 303 LLCEDYQ---GHGLGIQCDDGIFPPLSIIGGMIRMEDGVLKQNFDSRYPTNTTGSDLVKK 359 Query: 359 LEEAANRYGMQLTRTEDSPPHYIAPDDPIAAALCDLANRELGTSQPPYAMGGITHARWLP 418 L + +YG+++T EDS P YI D P A D N G P+ MGG T+AR Sbjct: 360 LSDLGAQYGVKVTDVEDSVPFYIGVDKPEIKACLDAGNEIRGVDGKPFTMGGGTYARHFK 419 Query: 419 RAAAFGPLRRDKPSPFPAGRGSGHQPDEAMNLEAVWDAFLIYVKAV 464 A +FG P P G H DE + ++ + + IY+ A+ Sbjct: 420 NAISFG--TEIPAEPLPDFVGKIHTFDEGIGIDRLKMSLKIYILAL 463 >B9CNS5.1 B9CNS5_9ACTN Putative dipeptidase Length = 478 Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 145/477 (30%), Positives = 212/477 (44%), Gaps = 23/477 (4%) Query: 4 ISSQELDRCISEFLEANQENMIEDAKGLIRIRSVGLDYQPGSTQPFGEGCRTVLDEAIRL 63 ++ + L + +++ N EN+IED + L+++ SV + +P+G L + L Sbjct: 1 MTDEVLKAQVDAYVDENWENIIEDIRYLVQVESVEDLSAAEAGKPWGPKSFEALRRGLEL 60 Query: 64 MQREKLEVTDFDGYGVKGALAASERGSIGFFAHLDVVPEGEGWSFPPYDPFVWDGFLWGR 123 +R L+ T+ DGY G L + + I AH D+VP G GW+ P D DG+L GR Sbjct: 61 AERLGLKTTNVDGYLGFGDLPGASQKYIATIAHTDIVPLGLGWTVDPLDVTRKDGYLLGR 120 Query: 124 GAMDNXXXXXXXXXXXXXXXE----SRLPLRHGLYLFLGCNEENGMRDIRHFLSRHEPPL 179 G +D+ E + L + L +G NEE GM D+ ++L R+ P Sbjct: 121 GVLDDKGPFVLSLWAAHFFVEHVKKTGKLLPYTLRAIVGNNEETGMGDVPYYLERYPEPA 180 Query: 180 FGIVPDAYFPLCFAEKGMLRADFEGEAADG-NLLAFNGGTEYNVVPAAASAILRDVDPDH 238 F PDA FPL EKG+ +F A G ++ +GGT N +P A A++R Sbjct: 181 FCFTPDAEFPLICGEKGVYHGEFTSAAIAGEKIVELDGGTVPNAIPGLACAVVR-----A 235 Query: 239 ARQVLPGSFTVEVLPEGV--------RITASGKAGHAAFPEGTDNXXXXXXXXXXXHGLV 290 LP + ++V GV RI+A GK GHA+ P GT N H L Sbjct: 236 DSTTLPKAPHIDVEDAGVDDQGNHLTRISAHGKGGHASMPAGTVNAIGLLDAYLLEHNLC 295 Query: 291 RGSRTLRA-LAFVQECFANPYGHGLGIAFRD--VSGETTVNAAVQMENGRLRLLCDIRYG 347 S T RA L F + G G I D T ++ V+ +NG D RY Sbjct: 296 --SDTERAFLEFSALLCSTTDGTGTNIQSSDDKFGPLTCISGTVRTKNGCFVQTIDSRYP 353 Query: 348 VTQEIGGIQQLLEEAANRYGMQLTRTEDSPPHYIAPDDPIAAALCDLANRELGTSQPPYA 407 + I +E+ YG D P YI P P A L D + G + Sbjct: 354 TSTTGKAITSAMEDLGKTYGCTYRVVADDVPFYIDPKSPEIATLLDTYHEYTGHEGKAFV 413 Query: 408 MGGITHARWLPRAAAFGPLRRDKPSPFPAGRGSGHQPDEAMNLEAVWDAFLIYVKAV 464 +GG T+AR A AFGP+ + PA G+ H PDE ++ E + A IY+ ++ Sbjct: 414 IGGGTYARHFKHAVAFGPVESAEADQIPAWVGAEHGPDEGVSEEWLRRALKIYIVSI 470 >A4EAN6.1 A4EAN6_9ACTN Putative uncharacterized protein Length = 478 Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 144/481 (29%), Positives = 222/481 (46%), Gaps = 23/481 (4%) Query: 7 QELDRCISEFLEANQENMIEDAKGLIRIRSVGL--DYQPGSTQPFGEGCRTVLDEAIRLM 64 ++++ ++E+++ E+++ D + L+ SV + D +PG+ PFG R LD A+ + Sbjct: 2 NQVEQSVAEYVDEVWEDVVADIEQLVSYPSVAVAADAEPGA--PFGRPVRDALDCALGIA 59 Query: 65 QREKLEVTDFDGYGVKGALAASERGSIGFFAHLDVVPEGEGWSFPPYDPFVWDGFLWGRG 124 Q+ + +D DGY + + H+DVVP G GW+ P+ +G+L GRG Sbjct: 60 QKLGYQTSDDDGYVGIADIPGRGDKQLATICHVDVVPAGPGWNTDPFAMERREGWLLGRG 119 Query: 125 AMDNXXXXXXXXXXXXXXXESRLPLRHGLYLFLGCNEENGMRDIRHFLSRHEPPLFGIVP 184 +D+ + + R+ LGC+EE GM D+ H+L H P F P Sbjct: 120 VIDDKGPAVLSLYAGAYLLKHGIVPRYTFRALLGCDEEVGMSDVHHYLENHADPDFLFTP 179 Query: 185 DAYFPLCFAEKGMLRADFEGEAAD-GNLLAFNGGTEYNVVPAAAS---AILRDVDPDHAR 240 DA FP+C AEKG A F D G +++++G N +P+ + AI D P Sbjct: 180 DAEFPVCNAEKGQFGATFVSPKIDGGRIVSWSGAEASNAIPSQSICELAIAADELPAPVE 239 Query: 241 QVLPGSFTVEVLPEG-VRITASGKAGHAAFPEGTDNXXXXXXXXXXXHGLVRGSRTLRAL 299 + L G +I A G GHA+ PEGT N G+R R L Sbjct: 240 NA--DRLEITALDNGHAQIFAHGIGGHASMPEGTINAVGLIVAYLREAEDAFGARDERLL 297 Query: 300 A--------FVQECFANPYGHGLGI-AFRDVSGETTVNAA-VQMENGRLRLLCDIRYGVT 349 F+ A+ YG GLGI A G T NA +++ +G + + D+R+ + Sbjct: 298 TPAEHEFVKFLAFVHADAYGRGLGIDATSPAFGPLTCNAGLIRVADGHIEQVIDVRFPDS 357 Query: 350 QEIGGIQQLLEEAANRYGMQLTRTEDSPPHYIAPDDPIAAALCDLANRELGTSQPPYAMG 409 I++ L+ R+G+ P ++ DDP AL D N G P+AMG Sbjct: 358 TSADTIREQLDPLVGRFGVTCRVGRAKVPFSVSADDPAVKALIDTYNEFTGKHAEPFAMG 417 Query: 410 GITHARWLPRAAAFGPLRRDKPSPFPAGRGSGHQPDEAMNLEAVWDAFLIYVKAVLVIDG 469 G T+AR RA +FGP + PA G H P+E N E + A IY+ A+L ++ Sbjct: 418 GGTYARNFARAVSFGP--EETGLELPAWGGQMHGPNECANEEQLKQALKIYIVAILRLNE 475 Query: 470 L 470 L Sbjct: 476 L 476 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.139 0.429 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,940,579,327 Number of extensions: 126602872 Number of successful extensions: 259546 Number of sequences better than 1.0e-05: 548 Number of HSP's gapped: 258274 Number of HSP's successfully gapped: 583 Length of query: 478 Length of database: 3,060,696,203 Length adjustment: 140 Effective length of query: 338 Effective length of database: 1,741,754,103 Effective search space: 588712886814 Effective search space used: 588712886814 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 133 (55.8 bits)