BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0342.0038.p (214 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q17ZV5.1 Q17ZV5_CLOD6 Putative uncharacterized protein 193 1e-47 Q24YQ2.1 Q24YQ2_DESHY Putative uncharacterized protein 175 2e-42 B8FS31.1 B8FS31_DESHD Putative uncharacterized protein 175 2e-42 B0PGP9.1 B0PGP9_9FIRM Putative uncharacterized protein 156 1e-36 C1XAS6.1 C1XAS6_9FUSO Putative uncharacterized protein 156 1e-36 >Q17ZV5.1 Q17ZV5_CLOD6 Putative uncharacterized protein Length = 216 Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 97/217 (44%), Positives = 140/217 (64%), Gaps = 5/217 (2%) Query: 1 MKIALINGSPKVKKSNSAIMLGILEPLIRSGHEITTYHLNKKPLTPEQYRELCRMDVLVI 60 M I +INGSPKV K+NS L L+ LI++ +++ T+ ++ P+ + D L+I Sbjct: 1 MNIVMINGSPKVNKNNSQYFLSELKQLIQNDNKVFTFKVDNTSKYPDALNAILNCDRLII 60 Query: 61 AFPLYVDGIPSHLFRMLVALEEYMKAEREGDIYVYALINNGFFEGQQNHIALEIIQNWCS 120 A PLYVDGIPSHL L E+++K + + I VYA++N GF EG+ NH+A++II++WC Sbjct: 61 ASPLYVDGIPSHLLHFLEKCEKFLKTQNKKPIPVYAIVNCGFNEGEHNHLAIQIIEHWCK 120 Query: 121 RCGLHFGQGLGQGAGEMMGFLEKVPVGRGPLKNLGHAMQGLAGKW---HIHSRSVDESML 177 + + QG+G GAGEM G LE VP+G+GP K+LG A++ L+ +IH ++S + Sbjct: 121 KINFTWVQGIGIGAGEMFGSLESVPLGKGPKKDLGIALKELSKNILSDNIHIDDSNKSTI 180 Query: 178 F-SPNFPRFAWKFTATHSFWNATAKKNGLKKKDILRR 213 F SPNFPRF +K H WN AK NGL K DIL++ Sbjct: 181 FISPNFPRFLYKLMGNHQ-WNTQAKSNGLTKSDILKK 216 >Q24YQ2.1 Q24YQ2_DESHY Putative uncharacterized protein Length = 213 Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 104/215 (48%), Positives = 137/215 (63%), Gaps = 6/215 (2%) Query: 1 MKIALINGSPKVKKSNSAIMLGILEPLIRSGHEITTYHLNKKPLTPEQYRELCRMDVLVI 60 +KIALINGSPK K S S +L L L+ +IT Y K L+ E +L DV V+ Sbjct: 2 LKIALINGSPKAKNSASEAVLQALRTLVEDS-KITEYGFRKPQLSLEDLEQLEEQDVWVL 60 Query: 61 AFPLYVDGIPSHLFRMLVALEEYMKAERE--GDIYVYALINNGFFEGQQNHIALEIIQNW 118 AFPLYVDGIPSHL L LE + KA+ + ++ VY L+N GF+EG+Q +ALE+++NW Sbjct: 61 AFPLYVDGIPSHLLSCLAQLENHFKAKAQPGSEVVVYCLVNCGFYEGEQCGLALEMVENW 120 Query: 119 CSRCGLHFGQGLGQGAGEMMGFLEKVPVGRGPLKNLGHAMQGLAGKWHIHSRSVDESMLF 178 C+R G +GQGLG GAG M+ L+ VP G GP KNLG A+Q LA +I R+ + Sbjct: 121 CARAGRQWGQGLGIGAGGMLPTLKNVPAGSGPKKNLGKALQTLAA--NIVHRTGGAPVFI 178 Query: 179 SPNFPRFAWKFTATHSFWNATAKKNGLKKKDILRR 213 + NFPRFA+KF A + W K NGLKK+++ RR Sbjct: 179 TANFPRFAYKF-AAEAGWRQMVKANGLKKEELFRR 212 >B8FS31.1 B8FS31_DESHD Putative uncharacterized protein Length = 213 Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 104/215 (48%), Positives = 137/215 (63%), Gaps = 6/215 (2%) Query: 1 MKIALINGSPKVKKSNSAIMLGILEPLIRSGHEITTYHLNKKPLTPEQYRELCRMDVLVI 60 +KIALINGSPK K S S +L L L+ +IT Y K L+ E +L DV V+ Sbjct: 2 LKIALINGSPKAKNSASEAVLQALRTLVEDS-KITEYGFRKPQLSLEDLEQLEEQDVWVL 60 Query: 61 AFPLYVDGIPSHLFRMLVALEEYMKAERE--GDIYVYALINNGFFEGQQNHIALEIIQNW 118 AFPLYVDGIPSHL L LE + KA+ + ++ VY L+N GF+EG+Q +ALE+++NW Sbjct: 61 AFPLYVDGIPSHLLSCLAQLENHFKAKAQPGSEVVVYCLVNCGFYEGEQCGLALEMVENW 120 Query: 119 CSRCGLHFGQGLGQGAGEMMGFLEKVPVGRGPLKNLGHAMQGLAGKWHIHSRSVDESMLF 178 C+R G +GQGLG GAG M+ L+ VP G GP KNLG A+Q LA +I R+ + Sbjct: 121 CARAGRQWGQGLGIGAGGMLPTLKNVPAGSGPKKNLGKALQTLAA--NIVHRTGGAPVFI 178 Query: 179 SPNFPRFAWKFTATHSFWNATAKKNGLKKKDILRR 213 + NFPRFA+KF A + W K NGLKK+++ RR Sbjct: 179 TANFPRFAYKF-AAEAGWRQMVKANGLKKEELFRR 212 >B0PGP9.1 B0PGP9_9FIRM Putative uncharacterized protein Length = 213 Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 91/214 (42%), Positives = 118/214 (55%), Gaps = 4/214 (1%) Query: 1 MKIALINGSPKVKKSNSAIMLGILEPLIRSGHEITTYHLNKKPLTPEQYRELCRMDVLVI 60 MK ALIN SPK S S ++L L P + G T + L + P+ D LV Sbjct: 1 MKTALINASPKRTGSASGMLLDALYPRL-EGCSCTEFRLGIEKPDPQILETFADFDALVF 59 Query: 61 AFPLYVDGIPSHLFRMLVALEEYMKAEREGDIYVYALINNGFFEGQQNHIALEIIQNWCS 120 AFPLYVDG+P+HL R L ALE + D VY L+N GF+EG+Q ALE++++W Sbjct: 60 AFPLYVDGLPAHLLRHLQALEPLLLQRPCPDRRVYTLVNCGFYEGRQTACALEMMEHWRL 119 Query: 121 RCGLHFGQGLGQGAGEMMGFLEKVPVGRGPLKNLGHAMQGLAGKWHIHSRSVDESMLFSP 180 R GL G GLG GAG MM L VP G GP K LG + LA I + + E+ S Sbjct: 120 RAGLDRGMGLGVGAGPMMLELASVPPGHGPKKALGEGLDVLAA--CIKNGAPGENRFLSV 177 Query: 181 NFPRFAWKFTATHSFWNATAKKNGLKKKDILRRL 214 NFPRFA++ A + W A+ N L +D+ RR+ Sbjct: 178 NFPRFAYRL-AAQAHWRRLARANNLSARDLFRRI 210 >C1XAS6.1 C1XAS6_9FUSO Putative uncharacterized protein Length = 209 Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 84/213 (39%), Positives = 132/213 (61%), Gaps = 6/213 (2%) Query: 1 MKIALINGSPKVKKSNSAIMLGILEPLIRSGHEITTYHLNKKPLTPEQYRELCRMDVLVI 60 MKI++INGSPKV KSNS I+ + PL++ +EI Y+ L + E+ D+L+ Sbjct: 1 MKISIINGSPKVGKSNSEILGNYILPLLKD-NEIKKYYSISVRLNDKIKNEIHSSDILIF 59 Query: 61 AFPLYVDGIPSHLFRMLVALEEYMKAEREGDIYVYALINNGFFEGQQNHIALEIIQNWCS 120 FPLYVDGIPS+L ++LV E+ + E IY A NNGF+EG+QN +A+ ++NWC Sbjct: 60 LFPLYVDGIPSNLLKLLVEFEKEKVIKSETKIYCIA--NNGFYEGKQNRLAILQMKNWCE 117 Query: 121 RCGLHFGQGLGQGAGEMMGFLEKVPVGRGPLKNLGHAMQGLAGKWHIHSRSVDESMLFSP 180 + +GQG+G GAGE++ +L+K +G+GPLKNLG + + +I + D+ + +P Sbjct: 118 KVKADWGQGIGLGAGELLPYLKKYKLGQGPLKNLGKVLDKFST--NILTLKSDKDIYINP 175 Query: 181 NFPRFAWKFTATHSFWNATAKKNGLKKKDILRR 213 N+ + + F + S W +KN L+ +++ RR Sbjct: 176 NWLKSLYFFQGSIS-WILKGRKNNLRIRELFRR 207 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.323 0.140 0.434 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,348,380,762 Number of extensions: 58081622 Number of successful extensions: 115156 Number of sequences better than 1.0e-05: 40 Number of HSP's gapped: 115085 Number of HSP's successfully gapped: 40 Length of query: 214 Length of database: 3,060,696,203 Length adjustment: 130 Effective length of query: 84 Effective length of database: 1,835,964,253 Effective search space: 154220997252 Effective search space used: 154220997252 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 128 (53.9 bits)