BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0342.0037.p (167 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C1I6J5.1 C1I6J5_9CLOT Putative uncharacterized protein 189 1e-46 B0MFU5.1 B0MFU5_9FIRM Putative uncharacterized protein 187 3e-46 B8FS30.1 B8FS30_DESHD Putative uncharacterized protein 174 2e-42 B0PGQ0.1 B0PGQ0_9FIRM Putative uncharacterized protein 171 2e-41 Q24YQ3.1 Q24YQ3_DESHY Putative uncharacterized protein 169 5e-41 >C1I6J5.1 C1I6J5_9CLOT Putative uncharacterized protein Length = 167 Score = 189 bits (479), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 81/166 (48%), Positives = 120/166 (72%) Query: 1 MKMIIHDLDQQEYAAWAEAPQEDVTVISDNGTIRHCTGCYGCWVRTPGVCVLKDGYHNIG 60 M++IIHDL +E+ ED +VISD+G+I +C GC+GCW++TPG CV++D Y ++G Sbjct: 1 MRLIIHDLKSEEFEKLFPNGLEDTSVISDDGSIHNCIGCFGCWLKTPGACVIRDKYVDMG 60 Query: 61 ELFSKCDELMIISKCVYGSYSPFILNVLDRSISYVLPYFSTQSGETHHRKRYDHQFALSV 120 E SKCDE++IIS+C YG +SPF+ NVLDRSISYVLP+F +GE HH++RYD++ + V Sbjct: 61 EYLSKCDEVIIISECAYGGFSPFVKNVLDRSISYVLPFFKINNGEMHHQRRYDNKVDMKV 120 Query: 121 HFYGEGLTEAEIETAKKLVAANSANLYSTGNTVYFHNSLQAVKEVL 166 FY +TE E +TA+++V AN NLY + V F N ++ ++ ++ Sbjct: 121 WFYENKITEKEKQTARRIVKANCINLYWEISNVSFVNDIKEMEGLI 166 >B0MFU5.1 B0MFU5_9FIRM Putative uncharacterized protein Length = 170 Score = 187 bits (475), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 80/155 (51%), Positives = 112/155 (72%) Query: 1 MKMIIHDLDQQEYAAWAEAPQEDVTVISDNGTIRHCTGCYGCWVRTPGVCVLKDGYHNIG 60 MK+IIHDLD++E+ P EDV +I ++G I +C GC+GCW++TPG C+++D Y ++G Sbjct: 6 MKLIIHDLDEEEFKNIFSEPDEDVVLIGNSGEILNCIGCFGCWIKTPGKCIIRDQYGDMG 65 Query: 61 ELFSKCDELMIISKCVYGSYSPFILNVLDRSISYVLPYFSTQSGETHHRKRYDHQFALSV 120 EL ++C+E IIS+C YG YSPF+ NVLDRSI Y+ PYF ++GE HH++RYD L V Sbjct: 66 ELLARCEEARIISRCCYGGYSPFVKNVLDRSIPYLHPYFKIKNGEMHHKQRYDKILKLKV 125 Query: 121 HFYGEGLTEAEIETAKKLVAANSANLYSTGNTVYF 155 FYGE ++E E TA++LV AN+ NLY+ V F Sbjct: 126 GFYGECISEDEKRTAEELVRANAVNLYAQVQGVRF 160 >B8FS30.1 B8FS30_DESHD Putative uncharacterized protein Length = 166 Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 82/163 (50%), Positives = 108/163 (66%), Gaps = 1/163 (0%) Query: 1 MKMIIHDLDQQEYAAWAEAPQEDVTVISDNGTIRHCTGCYGCWVRTPGVCVLKDGYHNIG 60 M+++IHDL Q+E D +I++NG IRHC GC+GCWV+TPG CV++D Y ++G Sbjct: 1 MRLLIHDLAQEELDKIRPGLGGDTKIIANNGRIRHCIGCFGCWVKTPGACVIRDEYGDMG 60 Query: 61 ELFSKCDELMIISKCVYGSYSPFILNVLDRSISYVLPYFSTQSGETHHRKRYDHQFALSV 120 EL+IIS+C YG YSPF+ NVLDRSISY+ PYF ++GE HHR RY+ LSV Sbjct: 61 ADLGHSSELIIISQCFYGGYSPFVKNVLDRSISYIHPYFVIRNGEMHHRPRYEQPLDLSV 120 Query: 121 HFYGEGLTEAEIETAKKLVAANSANLYSTGNTVYFHNSLQAVK 163 FYGE +TE E TA+KLV AN+ NL V+F L ++ Sbjct: 121 WFYGE-ITEKEQRTAEKLVRANAVNLNCQRVKVFFIRELAELE 162 >B0PGQ0.1 B0PGQ0_9FIRM Putative uncharacterized protein Length = 168 Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 76/167 (45%), Positives = 107/167 (64%) Query: 1 MKMIIHDLDQQEYAAWAEAPQEDVTVISDNGTIRHCTGCYGCWVRTPGVCVLKDGYHNIG 60 M ++IHD+ A VI+D+G R C GC+GCW++TPG CV++DGY ++G Sbjct: 1 MDLLIHDVKGASAKALITGAFAGAQVIADDGPARPCIGCFGCWIKTPGTCVIRDGYADMG 60 Query: 61 ELFSKCDELMIISKCVYGSYSPFILNVLDRSISYVLPYFSTQSGETHHRKRYDHQFALSV 120 S+C L I+S+CVYG +SPF+ V+DRSISYV PYF ++GE HHR RY+++ L+V Sbjct: 61 ARLSRCKRLFIVSQCVYGGFSPFVKTVIDRSISYVHPYFVIKNGEMHHRGRYENRMDLTV 120 Query: 121 HFYGEGLTEAEIETAKKLVAANSANLYSTGNTVYFHNSLQAVKEVLA 167 FYG LT+A+ TA+K V A + N Y N V F ++ +KE A Sbjct: 121 WFYGTDLTDAQRATARKFVQAMAVNFYCRLNQVCFVDAPDDIKEAPA 167 >Q24YQ3.1 Q24YQ3_DESHY Putative uncharacterized protein Length = 163 Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 82/163 (50%), Positives = 106/163 (65%), Gaps = 1/163 (0%) Query: 4 IIHDLDQQEYAAWAEAPQEDVTVISDNGTIRHCTGCYGCWVRTPGVCVLKDGYHNIGELF 63 +IHDL Q+E D +I++NG IRHC GC+GCWV+TPG CV++D Y ++G Sbjct: 1 MIHDLAQEELDKIRPGLGGDTKIIANNGRIRHCIGCFGCWVKTPGACVIRDEYGDMGADL 60 Query: 64 SKCDELMIISKCVYGSYSPFILNVLDRSISYVLPYFSTQSGETHHRKRYDHQFALSVHFY 123 EL+IIS+C YG YSPF+ NVLDRSISY+ PYF ++GE HHR RY+ LSV FY Sbjct: 61 GHSSELIIISQCFYGGYSPFVKNVLDRSISYIHPYFVIRNGEMHHRPRYEQPLDLSVWFY 120 Query: 124 GEGLTEAEIETAKKLVAANSANLYSTGNTVYFHNSLQAVKEVL 166 GE +TE E TA+KLV AN+ NL V+F L ++ L Sbjct: 121 GE-ITEKEQRTAEKLVRANAVNLNCQRVKVFFIRELAELEGQL 162 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.135 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,018,192,234 Number of extensions: 39485023 Number of successful extensions: 80394 Number of sequences better than 1.0e-05: 52 Number of HSP's gapped: 80390 Number of HSP's successfully gapped: 52 Length of query: 167 Length of database: 3,060,696,203 Length adjustment: 125 Effective length of query: 42 Effective length of database: 1,883,069,328 Effective search space: 79088911776 Effective search space used: 79088911776 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 126 (53.1 bits)