BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0342.0029.p (261 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0CSL9.1 C0CSL9_9FIRM Putative uncharacterized protein 116 2e-24 C1FUL3.1 C1FUL3_CLOBJ Putative uncharacterized protein 111 5e-23 C3L273.1 C3L273_CLOB6 Putative uncharacterized protein 108 4e-22 B1QLV5.1 B1QLV5_CLOBO Putative uncharacterized protein 108 4e-22 A7FS38.1 A7FS38_CLOB1 Putative uncharacterized protein 108 6e-22 >C0CSL9.1 C0CSL9_9FIRM Putative uncharacterized protein Length = 319 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 65/209 (31%), Positives = 114/209 (54%), Gaps = 2/209 (0%) Query: 26 QNAQKVKQDFAWKNAQVNRLAALLYTAENKIADSEAIRASFELIKEHTGSFSSFRXXXXX 85 +N ++++ FAW+N+ ++ + A L+T + +IAD++ ++ +++EHTG+FS FR Sbjct: 2 ENKERIRAAFAWENSYLHPVCAALFTNQRQIADTDWMKRCKGILEEHTGAFSGFRGIAKL 61 Query: 86 XXXXXXXXXXNQEKQLVDTLAVYELLKDAKFRGSDHLVIAAYQIAVNTAPDQYLQTVERA 145 + E+++ L VYE +K+ F S +L +A+ I+ D+Y + R Sbjct: 62 SMISYLALDGSPERRMQKALLVYEAMKE-HFFSSQYLSVASMMISGMAEKDRYEEIARRT 120 Query: 146 KAFYEGMKARHPFLTGRDDYIFAALLGLSGIPVESGLLRMEELYAALKPEFLSGNSVQAL 205 + Y+ M+ HPFLT +D +FAALL LS E + E+ Y LK +F +GN++Q+L Sbjct: 121 RRIYDLMRKEHPFLTSSEDSVFAALLALSEKSDEEVIRETEDCYRLLKEQFSTGNALQSL 180 Query: 206 TQVLVLRD-NASETASQVLALRDAXXXXG 233 + L L + A E + + L D G Sbjct: 181 SHALALGEGTAKEKCERTIRLYDLLKEKG 209 >C1FUL3.1 C1FUL3_CLOBJ Putative uncharacterized protein Length = 342 Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 65/208 (31%), Positives = 111/208 (53%), Gaps = 2/208 (0%) Query: 20 RLELFAQNAQKVKQDFAWKNAQVNRLAALLYTAENKIADSEAIRASFELIKEHTGSFSSF 79 +++L +N ++K+ F W+ + V AA+ ++K + + I + IK+ G FS F Sbjct: 19 KVDLMVENYAELKKAFKWEYSIVKHFAAMNSAIKHKKINVQEIEEIKDYIKKQVGLFSQF 78 Query: 80 RXXXXXXXXXXXXXXXNQEKQLVDTLAVYELLKDAKFRGSDHLVIAAYQIAVNTAPDQYL 139 R N + + VYE ++DA FR S +L +A+Y I + D++ Sbjct: 79 RGMNLFILSSLLYLESNYKDFFENMQKVYEKMRDAGFRNSQYLPLASYTIVKEVSMDKWD 138 Query: 140 QTVERAKAFYEGMKARHPFLTGRDDYIFAALLGLSGIPVESGLLRMEELYAALKPE-FLS 198 + ++R K+FY MK HP+LT DDY+ AA+L S + +E ME Y L + F+ Sbjct: 139 EKIQRMKSFYSNMKKNHPWLTTADDYVLAAVLATSDLDIEKTSEEMEICYKLLNEKAFVK 198 Query: 199 GNSVQALTQVLVL-RDNASETASQVLAL 225 GNS+Q+L+Q+L L ++A S+ ++L Sbjct: 199 GNSLQSLSQILALGEEDAENKCSRAVSL 226 >C3L273.1 C3L273_CLOB6 Putative uncharacterized protein Length = 331 Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 63/208 (30%), Positives = 110/208 (52%), Gaps = 2/208 (0%) Query: 20 RLELFAQNAQKVKQDFAWKNAQVNRLAALLYTAENKIADSEAIRASFELIKEHTGSFSSF 79 +++L +N ++K+ F W+ V AA+ ++K + + I + IK+ G FS F Sbjct: 8 KVDLMVENYAELKKAFKWEYNIVKHFAAMNSAVKHKKINVQEIEEIKDYIKKQVGLFSQF 67 Query: 80 RXXXXXXXXXXXXXXXNQEKQLVDTLAVYELLKDAKFRGSDHLVIAAYQIAVNTAPDQYL 139 R N + + VYE +++A F+ S +L +A+Y I + D++ Sbjct: 68 RGINLFISSSLLYLESNYKDFFENMQKVYEKMREAGFKNSQYLPLASYTIVKEVSMDKWD 127 Query: 140 QTVERAKAFYEGMKARHPFLTGRDDYIFAALLGLSGIPVESGLLRMEELYAALKPE-FLS 198 + ++R K+FY MK HP+LT DDY+ AA+L S + +E ME Y L + F+ Sbjct: 128 EKIQRMKSFYSNMKGNHPWLTSVDDYVLAAVLATSDLDIEKTSEEMEICYKLLNEKAFVK 187 Query: 199 GNSVQALTQVLVL-RDNASETASQVLAL 225 GNS+Q+L+Q+L L ++A S+ ++L Sbjct: 188 GNSLQSLSQILALGEEDAENKCSRAVSL 215 >B1QLV5.1 B1QLV5_CLOBO Putative uncharacterized protein Length = 331 Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 63/208 (30%), Positives = 110/208 (52%), Gaps = 2/208 (0%) Query: 20 RLELFAQNAQKVKQDFAWKNAQVNRLAALLYTAENKIADSEAIRASFELIKEHTGSFSSF 79 +++L +N ++K+ F W+ V AA+ ++K + + I + IK+ G FS F Sbjct: 8 KVDLMVENYAELKKAFKWEYNIVKHFAAMNSAVKHKKINVQEIEEIKDYIKKQVGLFSQF 67 Query: 80 RXXXXXXXXXXXXXXXNQEKQLVDTLAVYELLKDAKFRGSDHLVIAAYQIAVNTAPDQYL 139 R N + + VYE +++A F+ S +L +A+Y I + D++ Sbjct: 68 RGINLFISSSLLYLESNYKDFFENMQKVYEKMREAGFKNSQYLPLASYTIVKEVSMDKWD 127 Query: 140 QTVERAKAFYEGMKARHPFLTGRDDYIFAALLGLSGIPVESGLLRMEELYAALKPE-FLS 198 + ++R K+FY MK HP+LT DDY+ AA+L S + +E ME Y L + F+ Sbjct: 128 EKIQRMKSFYSNMKGNHPWLTSVDDYVLAAVLATSDLDIEKTSEEMEICYKLLNEKAFVK 187 Query: 199 GNSVQALTQVLVL-RDNASETASQVLAL 225 GNS+Q+L+Q+L L ++A S+ ++L Sbjct: 188 GNSLQSLSQILALGEEDAENKCSRAVSL 215 >A7FS38.1 A7FS38_CLOB1 Putative uncharacterized protein Length = 331 Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 63/208 (30%), Positives = 109/208 (52%), Gaps = 2/208 (0%) Query: 20 RLELFAQNAQKVKQDFAWKNAQVNRLAALLYTAENKIADSEAIRASFELIKEHTGSFSSF 79 +++L +N ++K+ F W+ V A+ ++K + + I + IK+ G FS F Sbjct: 8 KVDLMVENYAELKKAFKWEYGIVKHFGAMNSAIKHKKINVQEIEEIKDYIKKQVGLFSQF 67 Query: 80 RXXXXXXXXXXXXXXXNQEKQLVDTLAVYELLKDAKFRGSDHLVIAAYQIAVNTAPDQYL 139 R N + + VYE +++A FR S +L +A+Y I + D++ Sbjct: 68 RGMNLFILSSLLYLESNYKDFFENMQKVYEKMREAGFRNSQYLPLASYTIVKEVSMDKWD 127 Query: 140 QTVERAKAFYEGMKARHPFLTGRDDYIFAALLGLSGIPVESGLLRMEELYAALKPE-FLS 198 + ++R K+FY MK HP+LT DDY+ AA+L S + +E ME Y L + F+ Sbjct: 128 EKIQRMKSFYSNMKKNHPWLTTADDYVLAAVLATSDLDIEKTSEEMEICYKLLNEKAFVK 187 Query: 199 GNSVQALTQVLVL-RDNASETASQVLAL 225 GNS+Q+L+Q+L L ++A S+ ++L Sbjct: 188 GNSLQSLSQILALGEEDAENKCSRAVSL 215 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.133 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,305,679,889 Number of extensions: 43856642 Number of successful extensions: 107948 Number of sequences better than 1.0e-05: 96 Number of HSP's gapped: 107950 Number of HSP's successfully gapped: 96 Length of query: 261 Length of database: 3,060,696,203 Length adjustment: 133 Effective length of query: 128 Effective length of database: 1,807,701,208 Effective search space: 231385754624 Effective search space used: 231385754624 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 130 (54.7 bits)