BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0342.0015.p (201 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0ZE89.1 C0ZE89_BREBN Probable streptothricin acetyltransferase ... 216 1e-54 C2Q583.1 C2Q583_BACCE Streptothricin acetyltransferase 213 1e-53 C3AMI3.1 C3AMI3_BACMY Streptothricin acetyltransferase 208 2e-52 C3B4N5.1 C3B4N5_BACMY Streptothricin acetyltransferase 207 3e-52 A9VUS6.1 A9VUS6_BACWK GCN5-related N-acetyltransferase 206 1e-51 >C0ZE89.1 C0ZE89_BREBN Probable streptothricin acetyltransferase EC=2.3.1.- Length = 184 Score = 216 bits (549), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 101/184 (54%), Positives = 134/184 (72%) Query: 18 LDISIREMTAEDQGCWTDMDDSFIVDSALVLSFIASQFTYTVEDIPIYEKRYLEETPEQA 77 +DI IRE+ A D+ C ++D SFIVDS LVL I Q YTV++ P+ K Y +E E+ Sbjct: 1 MDIFIRELRAGDEECGANIDGSFIVDSTLVLQLIGQQIGYTVKERPLRTKSYDDEQLEED 60 Query: 78 DEIDDSEYINNPDQVVYLAFAEQQAVGRIVLKKNWNRYALIDMIQVDKPFRRHGIGRQLM 137 D S YI NP Q++Y+A Q VG+IVLK+NWN+YA ++ I+VDK FR +G+G++L+ Sbjct: 61 TIEDYSNYIGNPHQIIYIALVNNQVVGQIVLKRNWNKYAYVEDIKVDKQFRGYGLGKKLI 120 Query: 138 EQAKCWALERGLPGVMLETQSINVRACRFYESCGFVIGGFDQYVYKGIPAVSGEVAVYWY 197 EQAK WA + G+ G+MLETQS NVRAC+FYESCGFVIGGFD YVY+G+ S E+A+YWY Sbjct: 121 EQAKHWAKDGGMTGIMLETQSNNVRACKFYESCGFVIGGFDSYVYRGLDKDSDEIAIYWY 180 Query: 198 LHFE 201 L + Sbjct: 181 LMLD 184 >C2Q583.1 C2Q583_BACCE Streptothricin acetyltransferase Length = 184 Score = 213 bits (541), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 104/186 (55%), Positives = 135/186 (72%), Gaps = 4/186 (2%) Query: 18 LDISIREMTAEDQGCWTDMDDSFIVDSALVLSF--IASQFTYTVEDIPIYEKRYLEETPE 75 +++ IRE+ +D ++DDSFIV+S L+LS + Q YTVED+P YEK YL++ + Sbjct: 1 MNLLIRELEVDDLDNLPEIDDSFIVNSRLILSLSKVNKQIEYTVEDVPSYEKSYLQDQYD 60 Query: 76 QADEIDDSEYINNPDQVVYLAFAEQQAVGRIVLKKNWNRYALIDMIQVDKPFRRHGIGRQ 135 DE+ +EYIN PDQV+Y+A Q +G +VLKKNWN YA I+ I+VDK +R G+GR+ Sbjct: 61 --DELAYTEYINKPDQVIYIAILHDQIIGVMVLKKNWNHYAYIEDIKVDKKYRSLGVGRR 118 Query: 136 LMEQAKCWALERGLPGVMLETQSINVRACRFYESCGFVIGGFDQYVYKGIPAVSGEVAVY 195 L+EQAK WA E +PG+MLETQ+ NV ACRFYE CGFVIGG D VYKGI S EVA+Y Sbjct: 119 LIEQAKQWAKESNMPGIMLETQNNNVAACRFYEKCGFVIGGLDFLVYKGIHEESDEVAMY 178 Query: 196 WYLHFE 201 WYLHF+ Sbjct: 179 WYLHFK 184 >C3AMI3.1 C3AMI3_BACMY Streptothricin acetyltransferase Length = 192 Score = 208 bits (529), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 102/188 (54%), Positives = 137/188 (72%), Gaps = 4/188 (2%) Query: 18 LDISIREMTAEDQGCWTDMDDSFIVDSALVLSFIAS--QFTYTVEDIPIYEKRYLEE--T 73 +DI IR++ +D ++DDSF VDS LVLS A + YTV +IP YEK Y E+ Sbjct: 1 MDIFIRKLEIKDLNKIPEIDDSFTVDSKLVLSLEAKNQRIEYTVREIPSYEKNYSEDIYK 60 Query: 74 PEQADEIDDSEYINNPDQVVYLAFAEQQAVGRIVLKKNWNRYALIDMIQVDKPFRRHGIG 133 +Q +++D SEY+NN D+++YLAF Q +G I+LK+NWN +A ++ I+VDK FR+ G+G Sbjct: 61 EDQENDLDYSEYVNNLDKIIYLAFMNHQIIGMIILKRNWNSFAYVEDIKVDKQFRQRGVG 120 Query: 134 RQLMEQAKCWALERGLPGVMLETQSINVRACRFYESCGFVIGGFDQYVYKGIPAVSGEVA 193 R+L+EQAK WA +PG+MLETQS NVRAC+FYE+CGFVIGGFD VYKGI + EVA Sbjct: 121 RKLIEQAKHWAQACEMPGIMLETQSNNVRACKFYENCGFVIGGFDFLVYKGIHEQNDEVA 180 Query: 194 VYWYLHFE 201 +YWYL F+ Sbjct: 181 IYWYLRFK 188 >C3B4N5.1 C3B4N5_BACMY Streptothricin acetyltransferase Length = 192 Score = 207 bits (528), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 102/188 (54%), Positives = 137/188 (72%), Gaps = 4/188 (2%) Query: 18 LDISIREMTAEDQGCWTDMDDSFIVDSALVLSFIAS--QFTYTVEDIPIYEKRYLEE--T 73 +DI IR++ +D ++DDSF VDS LVLS A + YTV +IP YEK Y E+ Sbjct: 1 MDIFIRKLEIKDLNKIPEIDDSFTVDSKLVLSLEAKNQRIEYTVREIPSYEKTYSEDIYK 60 Query: 74 PEQADEIDDSEYINNPDQVVYLAFAEQQAVGRIVLKKNWNRYALIDMIQVDKPFRRHGIG 133 +Q +++D SEY+NN D+++YLAF Q +G I+LK+NWN +A ++ I+VDK FR+ G+G Sbjct: 61 EDQENDLDYSEYVNNLDKIIYLAFMNHQIIGMIILKRNWNSFAYVEDIKVDKQFRQRGVG 120 Query: 134 RQLMEQAKCWALERGLPGVMLETQSINVRACRFYESCGFVIGGFDQYVYKGIPAVSGEVA 193 R+L+EQAK WA +PG+MLETQS NVRAC+FYE+CGFVIGGFD VYKGI + EVA Sbjct: 121 RKLIEQAKHWAQACEMPGIMLETQSNNVRACKFYENCGFVIGGFDFLVYKGIHEQNDEVA 180 Query: 194 VYWYLHFE 201 +YWYL F+ Sbjct: 181 IYWYLRFK 188 >A9VUS6.1 A9VUS6_BACWK GCN5-related N-acetyltransferase Length = 184 Score = 206 bits (524), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 101/186 (54%), Positives = 132/186 (70%), Gaps = 4/186 (2%) Query: 18 LDISIREMTAEDQGCWTDMDDSFIVDSALVLSF--IASQFTYTVEDIPIYEKRYLEETPE 75 +++ IRE+ +D ++DDSFIV+S L+LS + Q YTVED+P YEK YL++ + Sbjct: 1 MNLLIRELEVDDLDNLPEIDDSFIVNSRLILSLSKVNKQIEYTVEDVPSYEKSYLQDQYD 60 Query: 76 QADEIDDSEYINNPDQVVYLAFAEQQAVGRIVLKKNWNRYALIDMIQVDKPFRRHGIGRQ 135 DE+ +EYIN PDQV+Y+A Q +G +VLKKNWN YA I I+VDK +R G+GR+ Sbjct: 61 --DELAYTEYINKPDQVIYIAILHDQIIGVMVLKKNWNHYAYIKDIKVDKKYRSLGVGRR 118 Query: 136 LMEQAKCWALERGLPGVMLETQSINVRACRFYESCGFVIGGFDQYVYKGIPAVSGEVAVY 195 L+EQA+ W E +PG+MLETQ+ NV ACRFYE C FVIGG D VYKGI S EVA+Y Sbjct: 119 LIEQARQWVKESNMPGIMLETQNNNVAACRFYEKCRFVIGGLDFLVYKGIHEESDEVAMY 178 Query: 196 WYLHFE 201 WYLHF+ Sbjct: 179 WYLHFK 184 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.322 0.138 0.420 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,192,480,305 Number of extensions: 47760226 Number of successful extensions: 121734 Number of sequences better than 1.0e-05: 176 Number of HSP's gapped: 121787 Number of HSP's successfully gapped: 176 Length of query: 201 Length of database: 3,060,696,203 Length adjustment: 129 Effective length of query: 72 Effective length of database: 1,845,385,268 Effective search space: 132867739296 Effective search space used: 132867739296 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 128 (53.9 bits)