BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0342.0011.p (471 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C5D431.1 C5D431_9BACI 6-phosphogluconate dehydrogenase, decarbox... 767 0.0 B1DHS1.1 B1DHS1_9BACL 6-phosphogluconate dehydrogenase, decarbox... 758 0.0 A4IQN4.1 A4IQN4_GEOTN 6-phosphogluconate dehydrogenase, decarbox... 755 0.0 B4BLE8.1 B4BLE8_9BACI 6-phosphogluconate dehydrogenase, decarbox... 755 0.0 B3KGH9.1 B3KGH9_9BACI 6-phosphogluconate dehydrogenase, decarbox... 755 0.0 >C5D431.1 C5D431_9BACI 6-phosphogluconate dehydrogenase, decarboxylating Length = 471 Score = 767 bits (1981), Expect = 0.0, Method: Compositional matrix adjust. Identities = 363/470 (77%), Positives = 406/470 (86%) Query: 1 MGKQQIGVVGLAVMGKNLALNMESKGFSVALYNRSREKTDELLAEAAGKNFTGAYSIEEF 60 M KQQIGV+GLAVMGKNLALN+ESKG+SVA+YNRSREKTDE L EA GKN G YSIEEF Sbjct: 2 MAKQQIGVIGLAVMGKNLALNIESKGYSVAVYNRSREKTDEFLKEAKGKNIVGTYSIEEF 61 Query: 61 VQSLETPRKIMIMVKAGKPTDDTIQQLVPHLSPGDILIDGGNAFFPDTQRRNKELQAQGF 120 V +LE PRKI++MVKAG PTD TI+QL P+L GDILIDGGN +F DTQRRNKEL G Sbjct: 62 VNALEKPRKILLMVKAGAPTDATIEQLKPYLEKGDILIDGGNTYFKDTQRRNKELAELGI 121 Query: 121 RFIGAGVSGGEEGALKGPAIMPGGQKDAYELVEPILTAISAKVDGDPCSTYIGEDGAGHY 180 FIG GVSGGEEGALKGP+IMPGGQK+A+ELV PI AI+AKVDG+PC+TYIG DGAGHY Sbjct: 122 HFIGTGVSGGEEGALKGPSIMPGGQKEAHELVRPIFEAIAAKVDGEPCTTYIGPDGAGHY 181 Query: 181 VKMVHNGIEYGDMQLIGEAYQLLKDVLGLDTAELHEIFSEWNRGELSSYLIEITADIFAK 240 VKMVHNGIEYGDMQLI EAY LLK VLGL+ ELHE+F+EWN+GEL+SYLIEITADIF K Sbjct: 182 VKMVHNGIEYGDMQLIAEAYFLLKHVLGLNAQELHEVFAEWNKGELNSYLIEITADIFTK 241 Query: 241 ADPDTGKPMVDVILDSAGQKGTGKWTSQNALDLGVPLSIITESVFARFISAMKEERVAAS 300 D +TGKP+VDVILD AGQKGTGKWTSQNALDLGVPL IITESVFARFISAMK+ERV AS Sbjct: 242 IDEETGKPLVDVILDKAGQKGTGKWTSQNALDLGVPLPIITESVFARFISAMKDERVKAS 301 Query: 301 KRLKGPAVKGYDGDAKEFIEAVRKALYASKIASYAQGFAQMRVASDEYNWNLNYGSIAMI 360 K L GPAVK ++GD FIEAVR+ALY SKI SYAQGFAQM+ ASDEYNWNL YG+IAMI Sbjct: 302 KLLSGPAVKPFEGDRARFIEAVRRALYMSKICSYAQGFAQMKAASDEYNWNLQYGNIAMI 361 Query: 361 FRGGCIIRAGFLQNIKDAYDRDPELKNLFLDEYFSSVVHNYQEAWRDVVALAVKRGIPVP 420 FRGGCIIRA FLQ IKDAYDRDP+L NL LD YF +V NYQEA R+++A+AV RGIPVP Sbjct: 362 FRGGCIIRAQFLQKIKDAYDRDPQLPNLLLDPYFKEIVENYQEALREIIAIAVMRGIPVP 421 Query: 421 AFASGLAYYDSYRSERLPANLLQAQRDYFGAHTFERLDQPGSFHFQWMDQ 470 AF+S LAYYDSYR E LPANL+QAQRDYFGAHT+ER+D+ G FH +W+ + Sbjct: 422 AFSSALAYYDSYRMETLPANLIQAQRDYFGAHTYERVDKEGVFHTEWLKK 471 >B1DHS1.1 B1DHS1_9BACL 6-phosphogluconate dehydrogenase, decarboxylating EC=1.1.1.44 Length = 470 Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust. Identities = 359/469 (76%), Positives = 407/469 (86%) Query: 1 MGKQQIGVVGLAVMGKNLALNMESKGFSVALYNRSREKTDELLAEAAGKNFTGAYSIEEF 60 M KQQIGV+GLAVMGKNLALN+ES+GF+V++YNRSREKTDEL+ E+AGKN AY++EEF Sbjct: 1 MAKQQIGVIGLAVMGKNLALNIESRGFTVSVYNRSREKTDELIKESAGKNLAPAYTVEEF 60 Query: 61 VQSLETPRKIMIMVKAGKPTDDTIQQLVPHLSPGDILIDGGNAFFPDTQRRNKELQAQGF 120 VQSLE+PRKI+IMV+AG TD TI LVPHL GDI+IDGGNA+FPDT RR+K L+ QG Sbjct: 61 VQSLESPRKILIMVQAGAGTDATIDALVPHLDKGDIIIDGGNAYFPDTVRRSKALEEQGI 120 Query: 121 RFIGAGVSGGEEGALKGPAIMPGGQKDAYELVEPILTAISAKVDGDPCSTYIGEDGAGHY 180 RFIG GVSGGEEGALKGP+IMPGGQ+ AY+LVEPILTAISAKV D C TYIG DGAGHY Sbjct: 121 RFIGTGVSGGEEGALKGPSIMPGGQESAYKLVEPILTAISAKVGDDACCTYIGPDGAGHY 180 Query: 181 VKMVHNGIEYGDMQLIGEAYQLLKDVLGLDTAELHEIFSEWNRGELSSYLIEITADIFAK 240 VKMVHNGIEYGDMQLI EAY LLK+ L L+ ELH IF+EWN+GEL SYLIEITADIF+K Sbjct: 181 VKMVHNGIEYGDMQLICEAYDLLKNTLDLNAEELHSIFTEWNKGELDSYLIEITADIFSK 240 Query: 241 ADPDTGKPMVDVILDSAGQKGTGKWTSQNALDLGVPLSIITESVFARFISAMKEERVAAS 300 DP+TGKPMVDVILDSAGQKGTGKWTSQ++LDLGVPLSIITESVF RF+SAMK+ER+AAS Sbjct: 241 YDPETGKPMVDVILDSAGQKGTGKWTSQSSLDLGVPLSIITESVFTRFLSAMKDERIAAS 300 Query: 301 KRLKGPAVKGYDGDAKEFIEAVRKALYASKIASYAQGFAQMRVASDEYNWNLNYGSIAMI 360 K L GP K ++GD FIE+VRKAL+ASKI SYAQGFAQMR AS+EY+WNL YG IAMI Sbjct: 301 KVLNGPEKKPFEGDKVAFIESVRKALFASKICSYAQGFAQMRAASEEYDWNLRYGDIAMI 360 Query: 361 FRGGCIIRAGFLQNIKDAYDRDPELKNLFLDEYFSSVVHNYQEAWRDVVALAVKRGIPVP 420 FRGGCIIRA FLQNIKDAYDRD L+NL LD YF +V +YQ AWR+VV AV G+PVP Sbjct: 361 FRGGCIIRARFLQNIKDAYDRDANLRNLLLDPYFQGIVDSYQGAWREVVGTAVANGVPVP 420 Query: 421 AFASGLAYYDSYRSERLPANLLQAQRDYFGAHTFERLDQPGSFHFQWMD 469 AFAS L+Y+DSYR+ERLPANLLQAQRDYFGAHTF+RLD+ GSFH WM+ Sbjct: 421 AFASALSYFDSYRTERLPANLLQAQRDYFGAHTFKRLDKEGSFHHNWMN 469 >A4IQN4.1 A4IQN4_GEOTN 6-phosphogluconate dehydrogenase, decarboxylating EC=1.1.1.44 Length = 470 Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust. Identities = 358/468 (76%), Positives = 404/468 (86%) Query: 1 MGKQQIGVVGLAVMGKNLALNMESKGFSVALYNRSREKTDELLAEAAGKNFTGAYSIEEF 60 M KQQIGV+GLAVMGKNLALN+ES+G+SVA+YNRSREKTDE L EA GKN G YSIEEF Sbjct: 1 MAKQQIGVIGLAVMGKNLALNIESRGYSVAVYNRSREKTDEFLEEAKGKNIVGTYSIEEF 60 Query: 61 VQSLETPRKIMIMVKAGKPTDDTIQQLVPHLSPGDILIDGGNAFFPDTQRRNKELQAQGF 120 V +LE PRKI++MVKAG PTD TI+QL P+L GDILIDGGN +F DTQRRN+EL G Sbjct: 61 VNALEKPRKILLMVKAGAPTDATIEQLKPYLEKGDILIDGGNTYFKDTQRRNEELAKLGI 120 Query: 121 RFIGAGVSGGEEGALKGPAIMPGGQKDAYELVEPILTAISAKVDGDPCSTYIGEDGAGHY 180 FIG GVSGGEEGALKGP+IMPGGQK+A+ELV PI AI+AKVDG+PC+TYIG DGAGHY Sbjct: 121 HFIGTGVSGGEEGALKGPSIMPGGQKEAHELVRPIFEAIAAKVDGEPCTTYIGPDGAGHY 180 Query: 181 VKMVHNGIEYGDMQLIGEAYQLLKDVLGLDTAELHEIFSEWNRGELSSYLIEITADIFAK 240 VKMVHNGIEYGDMQLI EAY LLK VLG+D AELHE+F++WN+GEL+SYLIEITADIF K Sbjct: 181 VKMVHNGIEYGDMQLIAEAYFLLKHVLGMDAAELHEVFADWNKGELNSYLIEITADIFTK 240 Query: 241 ADPDTGKPMVDVILDSAGQKGTGKWTSQNALDLGVPLSIITESVFARFISAMKEERVAAS 300 D +TGKP+VDVILD AGQKGTGKWTSQNALDLGVPL IITESVFARFISAMK+ERV AS Sbjct: 241 IDDETGKPLVDVILDKAGQKGTGKWTSQNALDLGVPLPIITESVFARFISAMKDERVKAS 300 Query: 301 KRLKGPAVKGYDGDAKEFIEAVRKALYASKIASYAQGFAQMRVASDEYNWNLNYGSIAMI 360 K L GPAVK ++GD FIEAVR+ALY SKI SYAQGFAQM+ ASDEYNWNL YG IAMI Sbjct: 301 KLLSGPAVKPFEGDRDHFIEAVRRALYMSKICSYAQGFAQMKAASDEYNWNLRYGDIAMI 360 Query: 361 FRGGCIIRAGFLQNIKDAYDRDPELKNLFLDEYFSSVVHNYQEAWRDVVALAVKRGIPVP 420 FRGGCIIRA FLQ IK+AYDRDP L NL LD YF ++V +YQ++ R++VA A RGIPVP Sbjct: 361 FRGGCIIRAQFLQKIKEAYDRDPALPNLLLDPYFKNIVESYQDSLREIVATAAMRGIPVP 420 Query: 421 AFASGLAYYDSYRSERLPANLLQAQRDYFGAHTFERLDQPGSFHFQWM 468 AFAS LAYYDSYR+E LPANL+QAQRDYFGAHT+ER+D+ G FH +W+ Sbjct: 421 AFASALAYYDSYRNEVLPANLIQAQRDYFGAHTYERVDKEGIFHTEWL 468 >B4BLE8.1 B4BLE8_9BACI 6-phosphogluconate dehydrogenase, decarboxylating EC=1.1.1.44 Length = 470 Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust. Identities = 358/468 (76%), Positives = 404/468 (86%) Query: 1 MGKQQIGVVGLAVMGKNLALNMESKGFSVALYNRSREKTDELLAEAAGKNFTGAYSIEEF 60 M KQQIGV+GLAVMGKNLALN+ES+G+SVA+YNRSREKTDE L EA GKN G YSIEEF Sbjct: 1 MAKQQIGVIGLAVMGKNLALNIESRGYSVAVYNRSREKTDEFLEEAKGKNIVGTYSIEEF 60 Query: 61 VQSLETPRKIMIMVKAGKPTDDTIQQLVPHLSPGDILIDGGNAFFPDTQRRNKELQAQGF 120 V +LE PRKI++MVKAG PTD TI+QL P+L GDILIDGGN +F DTQRRN+EL G Sbjct: 61 VNALEKPRKILLMVKAGAPTDATIEQLKPYLEKGDILIDGGNTYFKDTQRRNEELAKLGI 120 Query: 121 RFIGAGVSGGEEGALKGPAIMPGGQKDAYELVEPILTAISAKVDGDPCSTYIGEDGAGHY 180 FIG GVSGGEEGALKGP+IMPGGQK+A+ELV PI AI+AKVDG+PC+TYIG DGAGHY Sbjct: 121 HFIGTGVSGGEEGALKGPSIMPGGQKEAHELVRPIFEAIAAKVDGEPCTTYIGPDGAGHY 180 Query: 181 VKMVHNGIEYGDMQLIGEAYQLLKDVLGLDTAELHEIFSEWNRGELSSYLIEITADIFAK 240 VKMVHNGIEYGDMQLI EAY LLK VLG+D AELHE+F++WN+GEL+SYLIEITADIF K Sbjct: 181 VKMVHNGIEYGDMQLIAEAYFLLKHVLGMDAAELHEVFADWNKGELNSYLIEITADIFTK 240 Query: 241 ADPDTGKPMVDVILDSAGQKGTGKWTSQNALDLGVPLSIITESVFARFISAMKEERVAAS 300 D +TGKP+VDVILD AGQKGTGKWTSQNALDLGVPL IITESVFARFISAMK+ERV AS Sbjct: 241 IDDETGKPLVDVILDKAGQKGTGKWTSQNALDLGVPLPIITESVFARFISAMKDERVKAS 300 Query: 301 KRLKGPAVKGYDGDAKEFIEAVRKALYASKIASYAQGFAQMRVASDEYNWNLNYGSIAMI 360 K L GPAVK ++GD FIEAVR+ALY SKI SYAQGFAQM+ ASDEYNWNL YG IAMI Sbjct: 301 KLLSGPAVKPFEGDRDHFIEAVRRALYMSKICSYAQGFAQMKAASDEYNWNLRYGDIAMI 360 Query: 361 FRGGCIIRAGFLQNIKDAYDRDPELKNLFLDEYFSSVVHNYQEAWRDVVALAVKRGIPVP 420 FRGGCIIRA FLQ IK+AYDRDP L NL LD YF ++V +YQ++ R++VA A RGIPVP Sbjct: 361 FRGGCIIRAQFLQKIKEAYDRDPALPNLLLDPYFKNIVESYQDSLREIVATAAMRGIPVP 420 Query: 421 AFASGLAYYDSYRSERLPANLLQAQRDYFGAHTFERLDQPGSFHFQWM 468 AFAS LAYYDSYR+E LPANL+QAQRDYFGAHT+ER+D+ G FH +W+ Sbjct: 421 AFASALAYYDSYRNEVLPANLIQAQRDYFGAHTYERVDKEGIFHTEWL 468 >B3KGH9.1 B3KGH9_9BACI 6-phosphogluconate dehydrogenase, decarboxylating EC=1.1.1.44 Length = 473 Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust. Identities = 353/469 (75%), Positives = 411/469 (87%) Query: 1 MGKQQIGVVGLAVMGKNLALNMESKGFSVALYNRSREKTDELLAEAAGKNFTGAYSIEEF 60 M KQQIGV+GLAVMGKNLALN+ESKGF+V++YNRS +KT+++L E GK G +SIEEF Sbjct: 5 MSKQQIGVIGLAVMGKNLALNIESKGFTVSVYNRSPQKTEDMLKETEGKQVKGTFSIEEF 64 Query: 61 VQSLETPRKIMIMVKAGKPTDDTIQQLVPHLSPGDILIDGGNAFFPDTQRRNKELQAQGF 120 V SLETPRKI+IMV+AG+ TD TI+QL+PHL GDI+IDGGNA+FPDTQRR+KEL +GF Sbjct: 65 VDSLETPRKILIMVQAGQATDATIEQLIPHLDQGDIIIDGGNAYFPDTQRRSKELAEKGF 124 Query: 121 RFIGAGVSGGEEGALKGPAIMPGGQKDAYELVEPILTAISAKVDGDPCSTYIGEDGAGHY 180 FIGAGVSGGEEGALKGP+IMPGGQ+ AY+LVEPILTAISAKV+ +PC TYIG DGAGHY Sbjct: 125 NFIGAGVSGGEEGALKGPSIMPGGQESAYKLVEPILTAISAKVNEEPCCTYIGPDGAGHY 184 Query: 181 VKMVHNGIEYGDMQLIGEAYQLLKDVLGLDTAELHEIFSEWNRGELSSYLIEITADIFAK 240 VKMVHNGIEYGDMQLI EAYQLLKDVLGLD +LH IF+EWN+GEL SYLIEITADIF+K Sbjct: 185 VKMVHNGIEYGDMQLICEAYQLLKDVLGLDAKDLHGIFTEWNQGELDSYLIEITADIFSK 244 Query: 241 ADPDTGKPMVDVILDSAGQKGTGKWTSQNALDLGVPLSIITESVFARFISAMKEERVAAS 300 D +TGKPMVDVILD+AGQKGTGKWTSQ++LDLGVPLS+ITESVF+RF+SAMKEERVAAS Sbjct: 245 YDEETGKPMVDVILDTAGQKGTGKWTSQSSLDLGVPLSMITESVFSRFLSAMKEERVAAS 304 Query: 301 KRLKGPAVKGYDGDAKEFIEAVRKALYASKIASYAQGFAQMRVASDEYNWNLNYGSIAMI 360 K L GP +DGD EFIE VRKAL+ASKI SYAQGFAQ+RVASDEY WNL YG++A I Sbjct: 305 KILNGPKTAAFDGDKAEFIENVRKALFASKIVSYAQGFAQLRVASDEYGWNLQYGNLAKI 364 Query: 361 FRGGCIIRAGFLQNIKDAYDRDPELKNLFLDEYFSSVVHNYQEAWRDVVALAVKRGIPVP 420 +RGGCIIR+ FLQNI DAY+ +PELKNL LD +F+ ++ +YQ+AWR VVA AV GIPVP Sbjct: 365 WRGGCIIRSRFLQNITDAYENNPELKNLLLDPFFTDIIESYQDAWRKVVASAVSLGIPVP 424 Query: 421 AFASGLAYYDSYRSERLPANLLQAQRDYFGAHTFERLDQPGSFHFQWMD 469 F+S LAYYDSYR+ LPANLLQAQRDYFGAHTF+R+D+ G+FH+ WM+ Sbjct: 425 GFSSALAYYDSYRTANLPANLLQAQRDYFGAHTFKRVDKEGTFHYNWME 473 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.136 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,963,168,479 Number of extensions: 132851429 Number of successful extensions: 350547 Number of sequences better than 1.0e-05: 3255 Number of HSP's gapped: 344842 Number of HSP's successfully gapped: 3263 Length of query: 471 Length of database: 3,060,696,203 Length adjustment: 139 Effective length of query: 332 Effective length of database: 1,751,175,118 Effective search space: 581390139176 Effective search space used: 581390139176 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 133 (55.8 bits)