BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0341.0036.p (223 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A6LZ64.1 A6LZ64_CLOB8 Putative uncharacterized protein 143 1e-32 C1I539.1 C1I539_9CLOT Putative uncharacterized protein 121 6e-26 C1Q642.1 C1Q642_9ACTN Putative uncharacterized protein 60 1e-07 C2H9H2.1 C2H9H2_ENTFC Putative uncharacterized protein 60 2e-07 Q3XXD0.1 Q3XXD0_ENTFC Putative uncharacterized protein 59 3e-07 >A6LZ64.1 A6LZ64_CLOB8 Putative uncharacterized protein Length = 223 Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 70/200 (35%), Positives = 118/200 (59%), Gaps = 4/200 (2%) Query: 11 SDQVLGYAELKNDLLFHRIPSSKRRYYVERPLAIGREKALEYKARYGTDVGAICRDRGIR 70 +D+ L YAELKNDLLF +IP K +YYV+ L +G+ +E K G D+ +C D G++ Sbjct: 12 NDRTLAYAELKNDLLFQKIPKDKIKYYVDDSLFLGK---IEAKKYLGKDLKKLCEDNGVK 68 Query: 71 VSLNERQGTIGQIRFRAQIELSSQERVITLYKSSMEELRQ-CAGVLLPGRSFSLQEVTDI 129 + + ++ GT ++FRA+I S +E +I +Y++S+ +L C V S ++V ++ Sbjct: 69 IEIVKKSGTFYGVKFRAEISFSKKENIIKIYENSLIDLMNTCNKVDFFKEKLSYEDVFNM 128 Query: 130 HLAHELFHDLEFTELGYTNKRLDDISSLSLGPLRIRASVAKTSEIAAHAFSCHXXXXXXX 189 HLAHE +H LE+ E TN+ L+ ++ ++ + ++S+ K SEIAAH+FS Sbjct: 129 HLAHEFYHFLEYKEKKPTNELLEQVTLMNFVFFKRKSSIIKCSEIAAHSFSKEILGAKFL 188 Query: 190 XXXXDFAYMIHSGTLTAAEF 209 D+ Y+I G ++ +F Sbjct: 189 HNIYDYLYLIELGKISLDDF 208 >C1I539.1 C1I539_9CLOT Putative uncharacterized protein Length = 226 Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 70/205 (34%), Positives = 108/205 (52%), Gaps = 8/205 (3%) Query: 11 SDQVLGYAELKNDLLFHRIPSSKRRYYVERPLAIGREKALEYKARYGTDVGAICRDRGIR 70 +D++L ELK D LFH+IP K +YY+ IG+ A +YK ++ ++ + + Sbjct: 21 TDEILALLELKEDSLFHKIPKEKIKYYINEANRIGKNIASKYK---NEEIESLLKSNKVN 77 Query: 71 VSLNERQGTIGQIRFRAQIELSSQERVITLYKSSMEELRQCAGVLLP-GRSFSLQEVTDI 129 V + + + R +I +E+ I +YK+SM+ Q G L G + S QEV +I Sbjct: 78 VLIKDNSKA-KSLDIRGEITFDKKEKQIIIYKNSMD---QIIGTLKKYGFNISKQEVYNI 133 Query: 130 HLAHELFHDLEFTELGYTNKRLDDISSLSLGPLRIRASVAKTSEIAAHAFSCHXXXXXXX 189 HLAHE +H LEF TN LD+I + LGP++ +A++ KT EIAAHAF Sbjct: 134 HLAHEFYHFLEFKNEENTNYLLDEIDIIFLGPIKRKATILKTREIAAHAFCKELLNLSFH 193 Query: 190 XXXXDFAYMIHSGTLTAAEFWQEME 214 D+ Y+I + + EF +E Sbjct: 194 PKILDYIYLIENKKINLKEFKDYIE 218 >C1Q642.1 C1Q642_9ACTN Putative uncharacterized protein Length = 217 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 52/183 (28%), Positives = 85/183 (46%), Gaps = 13/183 (7%) Query: 1 VMKTATRTLPSDQVLGYAELKNDLLFHRIPSSKRRYYVERPLAIGREKA-LEYKARYG-T 58 + +A+R + L EL D RIP ++ V+ + G A + ++ G + Sbjct: 20 ISDSASRFPFPTRELALKELSWDRYVMRIPEEDKKRIVDLAWSKGECAAHMVFEESNGQS 79 Query: 59 DVGAICRDRGIRVSLNERQGTIGQIRFRAQIELSSQERVITLYKSSMEELRQCAGVLLPG 118 D IC+D G+ + + G R+ + ++E ITLY+ S CA + Sbjct: 80 DFFQICKDAGMTIIKKDIDCVYGNQRYFSDYVSGTKE--ITLYEQS------CA-LWAKQ 130 Query: 119 RSFSLQEVTDIHLAHELFHDLEFTELGYTNKRLDDISSLSLGPLRI-RASVAKTSEIAAH 177 L E ++ L HE FH LE T LG T+K + ++GP ++ + + SEIAAH Sbjct: 131 NQLDLHEAQNLILMHEFFHVLETTRLGLTSKEY-TVPLFTIGPFKLGKTGIHALSEIAAH 189 Query: 178 AFS 180 AF+ Sbjct: 190 AFT 192 >C2H9H2.1 C2H9H2_ENTFC Putative uncharacterized protein Length = 229 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 13/171 (7%) Query: 12 DQVLGYAELKNDLLFHRIPSSKRRYYVERPLAIGREKALEYKARYG-TDVGAICRDRGIR 70 +++ G+ + + DL + +IP SK++ + + + G E A K +Y DVG IC I Sbjct: 22 EEIWGFYQFQRDLFWKKIPLSKQKILIPQSIDCGIETACSIKKKYPFADVGEICEQMAIP 81 Query: 71 VSLNERQGTIGQIRFRAQIELSSQERVITLYKSSMEELRQCAGVLLPGRSFSLQEVTDIH 130 + E + QI R +++ I L +E+L+ C+G+ S S + + Sbjct: 82 IVPCESE----QINERITFATYAEDEGIRLMTEPLEKLK-CSGL----TSISKETAQALI 132 Query: 131 LAHELFHDLEFTELG-YTNKRLDDISSLSLGPLRIRASVAKTSEIAAHAFS 180 + HELFH +E + G YT + I L ++++ SEIAA +FS Sbjct: 133 IGHELFHHIEASVKGIYTQN--EKIVLWRLPFYTHQSTIRALSEIAAMSFS 181 >Q3XXD0.1 Q3XXD0_ENTFC Putative uncharacterized protein Length = 229 Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 47/171 (27%), Positives = 84/171 (49%), Gaps = 13/171 (7%) Query: 12 DQVLGYAELKNDLLFHRIPSSKRRYYVERPLAIGREKALEYKARYG-TDVGAICRDRGIR 70 +++ G+ + + DL + +IP SK++ +++ + G E A K +Y DVG IC + Sbjct: 22 EEIWGFYQFRRDLFWKKIPLSKQKILIQQSIDCGIETACSIKKKYPFADVGEICEQMAVP 81 Query: 71 VSLNERQGTIGQIRFRAQIELSSQERVITLYKSSMEELRQCAGVLLPGRSFSLQEVTDIH 130 + E + QI R +++ I L +E+L+ C+G+ S S + + Sbjct: 82 IVSCESE----QINERITFATYAEDEGIRLMTEPLEKLK-CSGL----ASISKETAQALI 132 Query: 131 LAHELFHDLEFTELG-YTNKRLDDISSLSLGPLRIRASVAKTSEIAAHAFS 180 + HELFH +E + G YT + I L ++++ SEIAA +FS Sbjct: 133 IGHELFHHIEASVKGIYTQS--EKIVLWRLPFYTHQSNIRALSEIAAMSFS 181 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.134 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,100,485,751 Number of extensions: 38304590 Number of successful extensions: 87329 Number of sequences better than 1.0e-05: 7 Number of HSP's gapped: 87332 Number of HSP's successfully gapped: 7 Length of query: 223 Length of database: 3,060,696,203 Length adjustment: 131 Effective length of query: 92 Effective length of database: 1,826,543,238 Effective search space: 168041977896 Effective search space used: 168041977896 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 128 (53.9 bits)