BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0341.0030.p (277 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KBM2.1 B3KBM2_9BACI Haloacid dehalogenase domain protein hydro... 267 9e-70 B1DDZ4.1 B1DDZ4_9BACL Haloacid dehalogenase domain protein hydro... 223 1e-56 C0ZIE3.1 C0ZIE3_BREBN Putative uncharacterized protein 196 1e-48 Q9LAG4.1 Q9LAG4_BACTR Putative uncharacterized protein 173 1e-41 C5D2N5.1 C5D2N5_9BACI HAD-superfamily hydrolase, subfamily IA, v... 172 3e-41 >B3KBM2.1 B3KBM2_9BACI Haloacid dehalogenase domain protein hydrolase Length = 228 Score = 267 bits (682), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 138/224 (61%), Positives = 164/224 (73%) Query: 52 STKLKKPEAIIFDMDGTLFQTESLLLPAYHKMFDILRAEGLYAGPTPPEERILSSLGMLL 111 + L KPEA+IFDMDGTLFQTE+LLLPAYHK+FDILR EG + G TP EE +L LGMLL Sbjct: 4 TATLIKPEAMIFDMDGTLFQTETLLLPAYHKLFDILREEGHHEGETPDEELMLGCLGMLL 63 Query: 112 SQIWKNVMPDADEAVHRRADXXXXXXXXXXXXXXXTLLYPKVTETLVALHERGVKLFVAS 171 IWK V+PDA A H RA+ +LYP+V ETL LH RGV+LFVAS Sbjct: 64 EDIWKKVIPDATPAAHNRANELLLQLELEGLSDEAAVLYPEVKETLEELHRRGVRLFVAS 123 Query: 172 NGLEDYIHSIVVVHELKELFDGLYSAGGQGTATKTELLRILLDEHGIKEAWMVGDRSSDV 231 NGLEDY+ I L LF+G+YSAG GTA+K +L+++LLD+H IK+AWMVGDRSSDV Sbjct: 124 NGLEDYVKGISQARGLMPLFEGVYSAGEHGTASKVDLVKLLLDQHEIKDAWMVGDRSSDV 183 Query: 232 EAGKGNGQTVIGCAYAGFGRQDELKGSDVIISSFDELIGLYDNS 275 EAGK NGQTVIGC YAGFG ELKGSDV+I SF +L+ L+D + Sbjct: 184 EAGKENGQTVIGCRYAGFGEDQELKGSDVVIHSFSQLLKLHDQA 227 >B1DDZ4.1 B1DDZ4_9BACL Haloacid dehalogenase domain protein hydrolase Length = 222 Score = 223 bits (569), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 112/221 (50%), Positives = 144/221 (65%), Gaps = 1/221 (0%) Query: 51 MSTKLKKPEAIIFDMDGTLFQTESLLLPAYHKMFDILRAEGLYAGPTPPEERILSSLGML 110 M+ + +P+A+IFDMDGTLF+T +LL + ++F LR EGLY TPP + +L LGML Sbjct: 1 MAIQFDRPDAVIFDMDGTLFETATLLETVHERLFRTLREEGLY-DRTPPLDDLLGCLGML 59 Query: 111 LSQIWKNVMPDADEAVHRRADXXXXXXXXXXXXXXXTLLYPKVTETLVALHERGVKLFVA 170 L IW+ +MP++ EA RAD LYP+ ETL +L E+G+KLFVA Sbjct: 60 LEDIWRKLMPESSEAARLRADELMVQYELEELEAGRGRLYPQTAETLKSLKEQGIKLFVA 119 Query: 171 SNGLEDYIHSIVVVHELKELFDGLYSAGGQGTATKTELLRILLDEHGIKEAWMVGDRSSD 230 SNGLE Y+ + + ELFDGLYSAG TA+K +L+ LL +H +K AWMVGDRSSD Sbjct: 120 SNGLETYVKEVARFQGIAELFDGLYSAGEFQTASKVDLVAKLLSDHRVKTAWMVGDRSSD 179 Query: 231 VEAGKGNGQTVIGCAYAGFGRQDELKGSDVIISSFDELIGL 271 VEA KGNG IGCAYAG+GR EL +DV I + EL+ L Sbjct: 180 VEAAKGNGLVAIGCAYAGYGRDSELADADVCIHAMPELLAL 220 >C0ZIE3.1 C0ZIE3_BREBN Putative uncharacterized protein Length = 228 Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 106/213 (49%), Positives = 133/213 (62%), Gaps = 1/213 (0%) Query: 58 PEAIIFDMDGTLFQTESLLLPAYHKMFDILRAEGLYAGPTPPEERILSSLGMLLSQIWKN 117 P AI+FDMDGTL QTE L PA+ + FD LR +GL+ G TP E +++ LGM + QIW Sbjct: 4 PFAILFDMDGTLLQTEKLSTPAFIRTFDQLRQKGLWQGETPDERELINVLGMTIEQIWDK 63 Query: 118 VMPDADEAVHRRADXXXXXXXXXXXXXXXTLLYPKVTETLVALHERGVKLFVASNGLEDY 177 ++P A E R AD T LYP V TL LHE+GV LFVASNG E+Y Sbjct: 64 LLPGASEEAIRSADAFLLDNEIQLLKERVTELYPDVKSTLEKLHEKGVALFVASNGQEEY 123 Query: 178 IHSIVVVHELKELFDGLYSAGGQGTATKTELLRILLDEHGIKEAWMVGDRSSDVEAGKGN 237 I +I +ELK L LYSAG T +K +L+ LL ++ I +A MVGDR SDVEAGK N Sbjct: 124 IDAICQAYELKPLMTDLYSAGRFRTHSKNDLVAKLLSDYKIGQAIMVGDRHSDVEAGKTN 183 Query: 238 GQTVIGCAYAGFGRQDELKGSDVIISSFDELIG 270 G IGC + GF + EL G+DVII+SF +L+ Sbjct: 184 GLFTIGCDF-GFAKPGELDGADVIITSFSQLLN 215 >Q9LAG4.1 Q9LAG4_BACTR Putative uncharacterized protein Length = 224 Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 95/211 (45%), Positives = 129/211 (61%), Gaps = 2/211 (0%) Query: 58 PEAIIFDMDGTLFQTESLLLPAYHKMFDILRAEGLYAGPTPPEERILSSLGMLLSQIWKN 117 P AIIFDMDGTLFQTE++L+PA HK F LR EGL+ G TP EE L LG+ + ++W+ Sbjct: 5 PFAIIFDMDGTLFQTETVLVPALHKTFGRLRREGLWQGDTPVEE-YLRILGVPIPEVWRQ 63 Query: 118 VMPDADEAVHRRADXXXXXXXXXXXXXXXTLLYPKVTETLVALHERGVKLFVASNGLEDY 177 +MP+ E V RA LYP V TL AL ++G+ LFVASNG + Y Sbjct: 64 LMPEESEGVRDRAAAWFLDDIIDEIRQGNGRLYPDVHTTLAALADQGIPLFVASNGRQRY 123 Query: 178 IHSIVVVHELKELFDGLYSAGGQGTATKTELLRILLDEHGIKEAWMVGDRSSDVEAGKGN 237 + +I L+ F YS +K+ L++ LL+++GI++A MVGDR SD++A K N Sbjct: 124 LAAIRTAFLLERYFIDFYSLDRFSLMSKSALVKQLLNDYGIEKAVMVGDRRSDIQAAKDN 183 Query: 238 GQTVIGCAYAGFGRQDELKGSDVIISSFDEL 268 G IGC + GF +EL+G+DVII F E+ Sbjct: 184 GIWSIGCRF-GFANDEELRGADVIIHQFSEI 213 >C5D2N5.1 C5D2N5_9BACI HAD-superfamily hydrolase, subfamily IA, variant 1 Length = 222 Score = 172 bits (436), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 95/214 (44%), Positives = 131/214 (61%), Gaps = 2/214 (0%) Query: 58 PEAIIFDMDGTLFQTESLLLPAYHKMFDILRAEGLYAGPTPPEERILSSLGMLLSQIWKN 117 P AI+FDMDGTLFQTE++L+PA HK FD LR EGL+ G TP +E L LG+ +S++W+ Sbjct: 5 PFAIVFDMDGTLFQTETVLVPALHKTFDRLRREGLWQGDTPVKE-YLRILGVPVSEVWRQ 63 Query: 118 VMPDADEAVHRRADXXXXXXXXXXXXXXXTLLYPKVTETLVALHERGVKLFVASNGLEDY 177 +MP+A E+V RA LYP V TL L ++G+ LFVASNG + Y Sbjct: 64 LMPEASESVRDRAAAWFLDDIIDEIEQGNGRLYPDVHTTLAVLADQGIPLFVASNGRQRY 123 Query: 178 IHSIVVVHELKELFDGLYSAGGQGTATKTELLRILLDEHGIKEAWMVGDRSSDVEAGKGN 237 + +I L+ F YS +K+ L++ LL+++GI++A MVGDR SD++A K N Sbjct: 124 LAAIRTAFLLERYFIDFYSLDRFSLMSKSALVKQLLNDYGIEKAVMVGDRRSDIQAAKDN 183 Query: 238 GQTVIGCAYAGFGRQDELKGSDVIISSFDELIGL 271 G IGC + GF +EL +DV+I F EL L Sbjct: 184 GIWSIGCRF-GFAAGEELAEADVVIEQFRELAAL 216 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.137 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,626,334,651 Number of extensions: 64895739 Number of successful extensions: 172753 Number of sequences better than 1.0e-05: 196 Number of HSP's gapped: 172810 Number of HSP's successfully gapped: 197 Length of query: 277 Length of database: 3,060,696,203 Length adjustment: 134 Effective length of query: 143 Effective length of database: 1,798,280,193 Effective search space: 257154067599 Effective search space used: 257154067599 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 130 (54.7 bits)