BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0341.0012.p (219 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q24YH3.1 Q24YH3_DESHY Putative uncharacterized protein 224 5e-57 B8FSP1.1 B8FSP1_DESHD Methyltransferase type 11 224 5e-57 C0ZHC0.1 C0ZHC0_BREBN Putative uncharacterized protein 223 1e-56 B9E3W5.1 B9E3W5_CLOK1 Putative uncharacterized protein 198 3e-49 A5MZZ1.1 A5MZZ1_CLOK5 Putative uncharacterized protein 198 3e-49 >Q24YH3.1 Q24YH3_DESHY Putative uncharacterized protein Length = 214 Score = 224 bits (570), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 108/212 (50%), Positives = 137/212 (64%), Gaps = 3/212 (1%) Query: 6 YVSRFFVNADARRDKLIYDLPESWWSRPYEYEWCTNFVSSHDVVLDAACGISHPLKFYLA 65 Y SRF +DA+ D +I+ L +WWSR YEY W +F VLDAACGISHP KF+L+ Sbjct: 5 YTSRFITTSDAQTDSMIFKLRSTWWSRFYEYAWAASFAEPEATVLDAACGISHPFKFFLS 64 Query: 66 GYSAEVHACDIDARILSRDAIIQEIASDIGEEAARLVEARRTTRLHLAQANLTALPYENE 125 A V+ACDID RIL +IIQEI +D+G EAA+ + R+H +QANL LPY Sbjct: 65 ENCAHVYACDIDERILHPGSIIQEITADLGYEAAQAIHPGYFERIHFSQANLAQLPYSES 124 Query: 126 SFDTIFCISVLEHLSLEDSVRAVKEFHRTLNGEGLLVLTFDYPTVNLLRMNEVLLQAGFE 185 FDTIFCISVLEHL L A++EF R L +GL++LTFDYP +NL + + Q G Sbjct: 125 MFDTIFCISVLEHLDLPTLRSALQEFKRILKQDGLIILTFDYPVINLTLLQTEIQQQGLS 184 Query: 186 YWGETDFKLPADAVRTEQWGGLSCFRAVLKKA 217 ++G DF LPADA+ L+CFRAVL K+ Sbjct: 185 FYGSVDFTLPADAITGYD---LNCFRAVLTKS 213 >B8FSP1.1 B8FSP1_DESHD Methyltransferase type 11 Length = 214 Score = 224 bits (570), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 108/212 (50%), Positives = 137/212 (64%), Gaps = 3/212 (1%) Query: 6 YVSRFFVNADARRDKLIYDLPESWWSRPYEYEWCTNFVSSHDVVLDAACGISHPLKFYLA 65 Y SRF +DA+ D +I+ L +WWSR YEY W +F VLDAACGISHP KF+L+ Sbjct: 5 YTSRFITTSDAQTDSMIFKLRSTWWSRFYEYAWAASFAEPEATVLDAACGISHPFKFFLS 64 Query: 66 GYSAEVHACDIDARILSRDAIIQEIASDIGEEAARLVEARRTTRLHLAQANLTALPYENE 125 A V+ACDID RIL +IIQEI +D+G EAA+ + R+H +QANL LPY Sbjct: 65 ENCAHVYACDIDERILHPGSIIQEITADLGYEAAQAIHPGYFERIHFSQANLAQLPYSES 124 Query: 126 SFDTIFCISVLEHLSLEDSVRAVKEFHRTLNGEGLLVLTFDYPTVNLLRMNEVLLQAGFE 185 FDTIFCISVLEHL L A++EF R L +GL++LTFDYP +NL + + Q G Sbjct: 125 MFDTIFCISVLEHLDLPTLRSALQEFKRILKQDGLIILTFDYPVINLTLLQTEIQQQGLS 184 Query: 186 YWGETDFKLPADAVRTEQWGGLSCFRAVLKKA 217 ++G DF LPADA+ L+CFRAVL K+ Sbjct: 185 FYGSVDFTLPADAITGYD---LNCFRAVLTKS 213 >C0ZHC0.1 C0ZHC0_BREBN Putative uncharacterized protein Length = 216 Score = 223 bits (567), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 107/210 (50%), Positives = 139/210 (66%), Gaps = 1/210 (0%) Query: 8 SRFFVNADARRDKLIYDLPESWWSRPYEYEWCTNFVSSHDVVLDAACGISHPLKFYLAGY 67 SRF VN D + D I+ LP +W SRPYEY W F + +DVVLD+ACGI HP KFYLA + Sbjct: 6 SRFIVNTDEKDDHFIFTLPVTWNSRPYEYAWAKQFANPNDVVLDSACGICHPFKFYLADH 65 Query: 68 SAEVHACDIDARILSRDAIIQEIASDIGEEAARLVEARRTTRLHLAQANLTALPYENESF 127 EVHACD+D RILS++AI Q+I G+ A + +H +ANLT LPY N+ F Sbjct: 66 CREVHACDLDNRILSKEAIYQDIVDVFGKRVADSLPVHYFDGIHYCRANLTYLPYSNQKF 125 Query: 128 DTIFCISVLEHLSLEDSVRAVKEFHRTLNGEGLLVLTFDYPTVNLLRMNEVLLQAGFEYW 187 DT+FCISVLEHL V+A EFHR L +G LVLTFDYP +NL R+ +VL + G ++ Sbjct: 126 DTVFCISVLEHLEDPVMVQAFSEFHRVLKDDGQLVLTFDYPLINLARLQQVLAEVGLQFS 185 Query: 188 GETDFKLPADAVRTEQWG-GLSCFRAVLKK 216 G+ F++P D V ++ + L FRA+LKK Sbjct: 186 GDVSFEMPTDVVYSDLYALRLFFFRALLKK 215 >B9E3W5.1 B9E3W5_CLOK1 Putative uncharacterized protein Length = 508 Score = 198 bits (503), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 92/214 (42%), Positives = 133/214 (62%), Gaps = 1/214 (0%) Query: 3 THPYVSRFFVNADARRDKLIYDLPESWWSRPYEYEWCTNFVSSHDVVLDAACGISHPLKF 62 T+ SRF +N D + + + P+ WWSR YEY W +NF +D LDAACG HP KF Sbjct: 296 TNKKSSRFIINTDEEKTECLLKFPDDWWSRCYEYTWASNFSEENDTCLDAACGAPHPFKF 355 Query: 63 YLAGYSAEVHACDIDARILSRDAIIQEIASDIGEEAARLVEARRTTRLHLAQANLTALPY 122 YLA V+ACDID IL ++ I+ ++ EE + A+ ++ + ++L ALPY Sbjct: 356 YLASICKNVYACDIDTDILDKNKILSRVSEYFDEEDVKKA-AKYIDKIKFSNSSLIALPY 414 Query: 123 ENESFDTIFCISVLEHLSLEDSVRAVKEFHRTLNGEGLLVLTFDYPTVNLLRMNEVLLQA 182 EN FD ++CISVLEHL++ED +++ EF+R L +GLLVLT DYPT +L + + L Sbjct: 415 ENNKFDKVYCISVLEHLTVEDIKKSISEFYRVLQKDGLLVLTIDYPTTDLNLLVDCLKNT 474 Query: 183 GFEYWGETDFKLPADAVRTEQWGGLSCFRAVLKK 216 GF++ D K+ +A+ ++ GGL CFR +LKK Sbjct: 475 GFKFVDSFDPKIYPNAIYSKLIGGLYCFRLLLKK 508 >A5MZZ1.1 A5MZZ1_CLOK5 Putative uncharacterized protein Length = 508 Score = 198 bits (503), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 92/214 (42%), Positives = 133/214 (62%), Gaps = 1/214 (0%) Query: 3 THPYVSRFFVNADARRDKLIYDLPESWWSRPYEYEWCTNFVSSHDVVLDAACGISHPLKF 62 T+ SRF +N D + + + P+ WWSR YEY W +NF +D LDAACG HP KF Sbjct: 296 TNKKSSRFIINTDEEKTECLLKFPDDWWSRCYEYTWASNFSEENDTCLDAACGAPHPFKF 355 Query: 63 YLAGYSAEVHACDIDARILSRDAIIQEIASDIGEEAARLVEARRTTRLHLAQANLTALPY 122 YLA V+ACDID IL ++ I+ ++ EE + A+ ++ + ++L ALPY Sbjct: 356 YLASICKNVYACDIDTDILDKNKILSRVSEYFDEEDVKKA-AKYIDKIKFSNSSLIALPY 414 Query: 123 ENESFDTIFCISVLEHLSLEDSVRAVKEFHRTLNGEGLLVLTFDYPTVNLLRMNEVLLQA 182 EN FD ++CISVLEHL++ED +++ EF+R L +GLLVLT DYPT +L + + L Sbjct: 415 ENNKFDKVYCISVLEHLTVEDIKKSISEFYRVLQKDGLLVLTIDYPTTDLNLLVDCLKNT 474 Query: 183 GFEYWGETDFKLPADAVRTEQWGGLSCFRAVLKK 216 GF++ D K+ +A+ ++ GGL CFR +LKK Sbjct: 475 GFKFVDSFDPKIYPNAIYSKLIGGLYCFRLLLKK 508 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.323 0.137 0.425 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,250,362,537 Number of extensions: 47152325 Number of successful extensions: 111353 Number of sequences better than 1.0e-05: 17 Number of HSP's gapped: 111471 Number of HSP's successfully gapped: 17 Length of query: 219 Length of database: 3,060,696,203 Length adjustment: 130 Effective length of query: 89 Effective length of database: 1,835,964,253 Effective search space: 163400818517 Effective search space used: 163400818517 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 128 (53.9 bits)