BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0340.0038.p (496 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1Q2N8.1 B1Q2N8_9BACL Putative glycosidase 810 0.0 A4PBS6.1 A4PBS6_9BACL Putative glycosidase 775 0.0 B1DGL2.1 B1DGL2_9BACL APHP domain protein 757 0.0 Q0WYG9.1 Q0WYG9_BACCI Alpha-1,3-glucanase 753 0.0 B3K6N9.1 B3K6N9_9BACI APHP domain protein 747 0.0 >B1Q2N8.1 B1Q2N8_9BACL Putative glycosidase Length = 1172 Score = 810 bits (2091), Expect = 0.0, Method: Compositional matrix adjust. Identities = 392/496 (79%), Positives = 419/496 (84%) Query: 1 MPDAADGMGLNGSLDAYVNGVKVKTIALTSYYSWQYFSGDQPGDAPGAGRPLFRFDEVHW 60 MPD+ADGMGLNGSLD YVNG KVKT++LTSYYSWQYFSGD PGD P AGRPLFRFDEVHW Sbjct: 677 MPDSADGMGLNGSLDVYVNGAKVKTVSLTSYYSWQYFSGDMPGDTPSAGRPLFRFDEVHW 736 Query: 61 KLDTPLQAGDTIRIQKNNGDSLEYGVDFLEIEPVPAAITRPANSVSVTDHGAVANDGQDD 120 K+DTPLQ GD IRIQKNNGDSLEYGVDF+EIE VP AI RPANSVSVTD+GAVANDGQDD Sbjct: 737 KMDTPLQPGDKIRIQKNNGDSLEYGVDFIEIESVPTAIARPANSVSVTDYGAVANDGQDD 796 Query: 121 LXXXXXXXXXXVSSGKALYIPAGTFNLSSMWQIGSANSMINNFTVTGAGFWHTNLQFTNP 180 L V+SGK++YIPAGTFNLSSMW+IGSA++MINN T+TGAG WHTN+QFTNP Sbjct: 797 LAAFKATVNAAVASGKSIYIPAGTFNLSSMWEIGSASNMINNLTITGAGLWHTNIQFTNP 856 Query: 181 NAAGGGISLRITGKLDFGHVYMNSNLRSRHNQNAVYKGFMDNFGNNSIIHDVWVEHFECG 240 NAAGGGISLRI+GKLDF +VYMNSNLRSR+ QNA+YKGFMDNFG NSIIHDVWVEHFECG Sbjct: 857 NAAGGGISLRISGKLDFSNVYMNSNLRSRYGQNAIYKGFMDNFGTNSIIHDVWVEHFECG 916 Query: 241 MWVGDYAHTPAIYASGLVIENSRIRNNLADGINFSQGXXXXXXXXXXXXXXGDDGLAVWP 300 MWVGDYAHTPAIYA+GLV+ENSRIRNNLADGINFSQG GDDGLAVW Sbjct: 917 MWVGDYAHTPAIYATGLVVENSRIRNNLADGINFSQGTSNSIVRNSSVRNNGDDGLAVWT 976 Query: 301 SNTFGAPDGVNNTFSYNTIENNWRAGGIAIFGGSGHKADHNYIIDTVGGSGIRLNTTFSG 360 SNT GAP GVNNTFSYNTIENNWRA IA FGGSGHKADHNYIIDTVGGSGIR+NT F G Sbjct: 977 SNTNGAPAGVNNTFSYNTIENNWRAAAIAFFGGSGHKADHNYIIDTVGGSGIRMNTVFPG 1036 Query: 361 AHFNNNTGILFSDTTIINSGTSQDLYNGERGAIDLEASQDPIKNVTFTNIDIFNTQRDAI 420 HF NNTG++FSDTTIINSGTS+DLY GERGAIDLEAS D IKNVTF NIDI NTQRDAI Sbjct: 1037 YHFQNNTGVVFSDTTIINSGTSKDLYGGERGAIDLEASNDAIKNVTFNNIDIINTQRDAI 1096 Query: 421 QLGYXXXXXXXXXXXXXXXXTGLDGVTTSRFSGAHKGAAIYTYTGNGSATFNNLTTSNIA 480 Q GY TGLD +TTSRFSG HKGAAIYTYTGNG+ATFNNLTTSNIA Sbjct: 1097 QFGYGGGFENIVFNNININGTGLDEITTSRFSGPHKGAAIYTYTGNGAATFNNLTTSNIA 1156 Query: 481 YLDLYYIQSGFGLTIQ 496 Y +L YIQSGF LTI Sbjct: 1157 YPNLNYIQSGFNLTIH 1172 >A4PBS6.1 A4PBS6_9BACL Putative glycosidase Length = 1217 Score = 775 bits (2002), Expect = 0.0, Method: Compositional matrix adjust. Identities = 378/496 (76%), Positives = 412/496 (83%) Query: 1 MPDAADGMGLNGSLDAYVNGVKVKTIALTSYYSWQYFSGDQPGDAPGAGRPLFRFDEVHW 60 MPD++DGMGLNGSLDAYVNG KVKTI LTSYY+WQYFSGD P DAP GRPLFRFDEVH+ Sbjct: 722 MPDSSDGMGLNGSLDAYVNGAKVKTIPLTSYYNWQYFSGDMPADAPSGGRPLFRFDEVHF 781 Query: 61 KLDTPLQAGDTIRIQKNNGDSLEYGVDFLEIEPVPAAITRPANSVSVTDHGAVANDGQDD 120 KLD LQ GDTIRIQK NGD+LEYGVDFLEIEPVP I RPAN+VSVTD+GAVANDGQDD Sbjct: 782 KLDQALQPGDTIRIQKTNGDNLEYGVDFLEIEPVPTEIARPANAVSVTDYGAVANDGQDD 841 Query: 121 LXXXXXXXXXXVSSGKALYIPAGTFNLSSMWQIGSANSMINNFTVTGAGFWHTNLQFTNP 180 L V+ GK LYIPAGTF+LSSMW+IGSA++MINN T+TGAG WHTN+QFTNP Sbjct: 842 LAAFKAAVNAAVAGGKTLYIPAGTFHLSSMWEIGSASNMINNITITGAGIWHTNIQFTNP 901 Query: 181 NAAGGGISLRITGKLDFGHVYMNSNLRSRHNQNAVYKGFMDNFGNNSIIHDVWVEHFECG 240 NAAGGGISLRI+GKLDF ++YMNSNLRSR+ QNA+YKGFMDNFGNNS+I DVWVEHFECG Sbjct: 902 NAAGGGISLRISGKLDFSNLYMNSNLRSRYGQNAIYKGFMDNFGNNSVIRDVWVEHFECG 961 Query: 241 MWVGDYAHTPAIYASGLVIENSRIRNNLADGINFSQGXXXXXXXXXXXXXXGDDGLAVWP 300 WVGDYAHTPAIYA+GL IENSRIRNNLADG+NF+QG GDD LAVW Sbjct: 962 FWVGDYAHTPAIYANGLTIENSRIRNNLADGVNFAQGTSNSIVRNSNLRNNGDDALAVWT 1021 Query: 301 SNTFGAPDGVNNTFSYNTIENNWRAGGIAIFGGSGHKADHNYIIDTVGGSGIRLNTTFSG 360 SNT GAP+GVNNTFSYNTIENNWRAGGIA FGGSGHKADHNYIID VGGSGIR+NT F G Sbjct: 1022 SNTNGAPEGVNNTFSYNTIENNWRAGGIAFFGGSGHKADHNYIIDCVGGSGIRMNTVFPG 1081 Query: 361 AHFNNNTGILFSDTTIINSGTSQDLYNGERGAIDLEASQDPIKNVTFTNIDIFNTQRDAI 420 HF NNTGI+F D TI+NSGTS+DLYNGERGAIDLEAS D IKNVTFTNIDI N+QRDAI Sbjct: 1082 YHFANNTGIVFLDNTIVNSGTSKDLYNGERGAIDLEASNDAIKNVTFTNIDIINSQRDAI 1141 Query: 421 QLGYXXXXXXXXXXXXXXXXTGLDGVTTSRFSGAHKGAAIYTYTGNGSATFNNLTTSNIA 480 Q GY TGLDG+TTSRFSG H GAAI+TYTGNG+A FNNLTTSNIA Sbjct: 1142 QFGYGGGFQNIVFNQITIHGTGLDGITTSRFSGPHLGAAIFTYTGNGAAIFNNLTTSNIA 1201 Query: 481 YLDLYYIQSGFGLTIQ 496 Y + YYIQ+GF L IQ Sbjct: 1202 YPNKYYIQNGFNLVIQ 1217 >B1DGL2.1 B1DGL2_9BACL APHP domain protein Length = 1293 Score = 757 bits (1954), Expect = 0.0, Method: Compositional matrix adjust. Identities = 372/494 (75%), Positives = 405/494 (81%), Gaps = 1/494 (0%) Query: 1 MPDAADGMGLNGSLDAYVNGVKVKTIALTSYYSWQYFSGDQPGDAPGAGRPLFRFDEVHW 60 MPD+ADGMGL+GSLD YVN VKVKT+AL+SYY+WQYFSGD P DAPG GRPLFRFDEVHW Sbjct: 799 MPDSADGMGLSGSLDVYVNNVKVKTVALSSYYNWQYFSGDMPADAPGGGRPLFRFDEVHW 858 Query: 61 KLDTPLQAGDTIRIQKNNGDSLEYGVDFLEIEPVPAAITRPANSVSVTDHGAVANDGQDD 120 KLDTPLQ GDT+RIQK N DS+EYGVDF+E+E VP AI +PANSVSVTD+GA+ANDGQDD Sbjct: 859 KLDTPLQPGDTVRIQKGN-DSIEYGVDFIEVEQVPTAIAQPANSVSVTDYGAIANDGQDD 917 Query: 121 LXXXXXXXXXXVSSGKALYIPAGTFNLSSMWQIGSANSMINNFTVTGAGFWHTNLQFTNP 180 L V++ K LYIPAGTF+L +MW+IGS ++MINN T+TGAG+W+TN+QFTNP Sbjct: 918 LTAFKAAVNAAVAANKTLYIPAGTFHLGNMWEIGSVSNMINNLTITGAGYWYTNIQFTNP 977 Query: 181 NAAGGGISLRITGKLDFGHVYMNSNLRSRHNQNAVYKGFMDNFGNNSIIHDVWVEHFECG 240 NAAGGGISLRITGKLDF +VY+NS LRSR+ QNA+YKGFMDNFG NS IHDVWVEHFECG Sbjct: 978 NAAGGGISLRITGKLDFSNVYLNSKLRSRYGQNAIYKGFMDNFGTNSKIHDVWVEHFECG 1037 Query: 241 MWVGDYAHTPAIYASGLVIENSRIRNNLADGINFSQGXXXXXXXXXXXXXXGDDGLAVWP 300 WVGDYAHTPAIYA+GL IENSRIRNNLADG+NFSQG GDD LAVW Sbjct: 1038 FWVGDYAHTPAIYANGLTIENSRIRNNLADGVNFSQGTSNSIVRNSNLRNNGDDALAVWT 1097 Query: 301 SNTFGAPDGVNNTFSYNTIENNWRAGGIAIFGGSGHKADHNYIIDTVGGSGIRLNTTFSG 360 SNT GAP GVNNTFSYNTIENNWRA GIA FGGSGHKADHN IIDTVGGSG+RLNT F G Sbjct: 1098 SNTNGAPAGVNNTFSYNTIENNWRAAGIAFFGGSGHKADHNVIIDTVGGSGVRLNTVFPG 1157 Query: 361 AHFNNNTGILFSDTTIINSGTSQDLYNGERGAIDLEASQDPIKNVTFTNIDIFNTQRDAI 420 HF NNTGI SDTTIINSGTSQDLYNGERGAIDLEAS D IKNVTFTNIDI N QRDAI Sbjct: 1158 YHFQNNTGITISDTTIINSGTSQDLYNGERGAIDLEASNDSIKNVTFTNIDILNAQRDAI 1217 Query: 421 QLGYXXXXXXXXXXXXXXXXTGLDGVTTSRFSGAHKGAAIYTYTGNGSATFNNLTTSNIA 480 Q GY TG DGVTTSRFSG H GAAIYTYTGNGSATFNNL T NIA Sbjct: 1218 QFGYGGGFENIVFNNVTIDGTGKDGVTTSRFSGPHLGAAIYTYTGNGSATFNNLVTRNIA 1277 Query: 481 YLDLYYIQSGFGLT 494 Y ++ Y+QSGF LT Sbjct: 1278 YPNVNYVQSGFTLT 1291 >Q0WYG9.1 Q0WYG9_BACCI Alpha-1,3-glucanase Length = 1293 Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust. Identities = 366/496 (73%), Positives = 398/496 (80%) Query: 1 MPDAADGMGLNGSLDAYVNGVKVKTIALTSYYSWQYFSGDQPGDAPGAGRPLFRFDEVHW 60 MPD+A+GMGLNGSLD YVNGVK KT+ LTSYYSWQYFS D P D P GRPLFRFDEVHW Sbjct: 798 MPDSANGMGLNGSLDVYVNGVKAKTVPLTSYYSWQYFSSDHPADTPAGGRPLFRFDEVHW 857 Query: 61 KLDTPLQAGDTIRIQKNNGDSLEYGVDFLEIEPVPAAITRPANSVSVTDHGAVANDGQDD 120 K+DTPLQ GDTIRIQK+ DSLEYGVDFLEIE VPAAI RPANSVSVTD GAVANDGQDD Sbjct: 858 KMDTPLQPGDTIRIQKSGADSLEYGVDFLEIEAVPAAIARPANSVSVTDFGAVANDGQDD 917 Query: 121 LXXXXXXXXXXVSSGKALYIPAGTFNLSSMWQIGSANSMINNFTVTGAGFWHTNLQFTNP 180 L V+SGK LYIPAGTF+L +MW+IGS + INN T+ GAG WHTN+QFTNP Sbjct: 918 LAAFEAAVNAAVTSGKILYIPAGTFHLGNMWKIGSVANKINNITIMGAGIWHTNIQFTNP 977 Query: 181 NAAGGGISLRITGKLDFGHVYMNSNLRSRHNQNAVYKGFMDNFGNNSIIHDVWVEHFECG 240 N A GGIS R+TG+LDF H+YMNSNLRSR+ + AVYKGFMDNFG NS +H+VWVEHFECG Sbjct: 978 NQASGGISFRVTGQLDFSHIYMNSNLRSRYGEQAVYKGFMDNFGTNSKVHNVWVEHFECG 1037 Query: 241 MWVGDYAHTPAIYASGLVIENSRIRNNLADGINFSQGXXXXXXXXXXXXXXGDDGLAVWP 300 WVGDYAHTPAI A+GLVIENSRIRNNLADG+NF+QG GDDGLAVW Sbjct: 1038 FWVGDYAHTPAIIANGLVIENSRIRNNLADGVNFAQGTSNSTVRNSSIRNNGDDGLAVWT 1097 Query: 301 SNTFGAPDGVNNTFSYNTIENNWRAGGIAIFGGSGHKADHNYIIDTVGGSGIRLNTTFSG 360 SN GAP GVNNTFSYNTIENNWRA GIA FGGSGHKA HN I+DTVGGS IR+NT F G Sbjct: 1098 SNVNGAPAGVNNTFSYNTIENNWRAAGIAFFGGSGHKATHNLIVDTVGGSAIRMNTVFPG 1157 Query: 361 AHFNNNTGILFSDTTIINSGTSQDLYNGERGAIDLEASQDPIKNVTFTNIDIFNTQRDAI 420 HF NNTGI+FSDTTIINSGTS+DLYNGERGAIDLEAS DPIKNVTFTNIDI NTQR AI Sbjct: 1158 YHFQNNTGIVFSDTTIINSGTSRDLYNGERGAIDLEASNDPIKNVTFTNIDIINTQRSAI 1217 Query: 421 QLGYXXXXXXXXXXXXXXXXTGLDGVTTSRFSGAHKGAAIYTYTGNGSATFNNLTTSNIA 480 Q GY G DGV TSRFS H GAAIYTYTGNGSATFNNLTT++IA Sbjct: 1218 QFGYGGGFENIVFNNININGAGKDGVLTSRFSSPHPGAAIYTYTGNGSATFNNLTTNDIA 1277 Query: 481 YLDLYYIQSGFGLTIQ 496 + +LY+IQ+GF LTIQ Sbjct: 1278 HPNLYFIQNGFNLTIQ 1293 >B3K6N9.1 B3K6N9_9BACI APHP domain protein Length = 1115 Score = 747 bits (1928), Expect = 0.0, Method: Compositional matrix adjust. Identities = 360/496 (72%), Positives = 396/496 (79%) Query: 1 MPDAADGMGLNGSLDAYVNGVKVKTIALTSYYSWQYFSGDQPGDAPGAGRPLFRFDEVHW 60 MPD++DGMGL+GSLD YVNG K KT+ LTSYYSWQYFS D P DAPG GRPLFRFDEVHW Sbjct: 620 MPDSSDGMGLDGSLDVYVNGSKKKTVPLTSYYSWQYFSSDHPADAPGGGRPLFRFDEVHW 679 Query: 61 KLDTPLQAGDTIRIQKNNGDSLEYGVDFLEIEPVPAAITRPANSVSVTDHGAVANDGQDD 120 KLDTPLQ GD IRIQK+N D+LEYGVDF+EIEPVPAAI RPANSVSVTD GA+ NDGQDD Sbjct: 680 KLDTPLQPGDKIRIQKSNADNLEYGVDFIEIEPVPAAIARPANSVSVTDFGAIPNDGQDD 739 Query: 121 LXXXXXXXXXXVSSGKALYIPAGTFNLSSMWQIGSANSMINNFTVTGAGFWHTNLQFTNP 180 L SSGK LYIP GTF+L +MW+IGS ++I++ + GAG WHTN+QFTNP Sbjct: 740 LTAFEAAVQAAASSGKTLYIPEGTFHLGNMWKIGSVGNLIDDMKIMGAGIWHTNIQFTNP 799 Query: 181 NAAGGGISLRITGKLDFGHVYMNSNLRSRHNQNAVYKGFMDNFGNNSIIHDVWVEHFECG 240 NAA GGISLRI G+LDF H+Y+NSNLRSR+NQNA+YKGFMDNFG NS IH+VWVEHFECG Sbjct: 800 NAASGGISLRIAGQLDFSHIYLNSNLRSRYNQNAIYKGFMDNFGTNSKIHNVWVEHFECG 859 Query: 241 MWVGDYAHTPAIYASGLVIENSRIRNNLADGINFSQGXXXXXXXXXXXXXXGDDGLAVWP 300 WVGDYAHTPA A GL+IENSRIRNNLADG+NF+QG GDDGLAVW Sbjct: 860 FWVGDYAHTPAKIAEGLIIENSRIRNNLADGVNFAQGTSHSTVRNSSIRNNGDDGLAVWT 919 Query: 301 SNTFGAPDGVNNTFSYNTIENNWRAGGIAIFGGSGHKADHNYIIDTVGGSGIRLNTTFSG 360 SN GAP GVNNTFSYNTIENNWRA IA FGGSGHKA HN I+DTVGGSGIR+NT F G Sbjct: 920 SNVNGAPAGVNNTFSYNTIENNWRAAAIAFFGGSGHKATHNLIVDTVGGSGIRMNTVFPG 979 Query: 361 AHFNNNTGILFSDTTIINSGTSQDLYNGERGAIDLEASQDPIKNVTFTNIDIFNTQRDAI 420 HF NNTGILFSDTTII SGTS+DLYNGERGAIDLEAS DPI+NVTFTNIDI NTQR A+ Sbjct: 980 YHFQNNTGILFSDTTIIGSGTSKDLYNGERGAIDLEASNDPIRNVTFTNIDILNTQRSAV 1039 Query: 421 QLGYXXXXXXXXXXXXXXXXTGLDGVTTSRFSGAHKGAAIYTYTGNGSATFNNLTTSNIA 480 Q GY TGLDGVT+SRFS H GAAIYTYTGNGSATFNNLT NIA Sbjct: 1040 QFGYGGGFENIVFNHIRIDGTGLDGVTSSRFSSPHPGAAIYTYTGNGSATFNNLTMQNIA 1099 Query: 481 YLDLYYIQSGFGLTIQ 496 + DLY+IQ+GF L + Sbjct: 1100 HPDLYFIQNGFHLIFE 1115 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.316 0.135 0.413 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,066,814,729 Number of extensions: 134390360 Number of successful extensions: 257732 Number of sequences better than 1.0e-05: 69 Number of HSP's gapped: 257430 Number of HSP's successfully gapped: 69 Length of query: 496 Length of database: 3,060,696,203 Length adjustment: 140 Effective length of query: 356 Effective length of database: 1,741,754,103 Effective search space: 620064460668 Effective search space used: 620064460668 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 133 (55.8 bits)