BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0340.0031.p (161 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1D9I9.1 B1D9I9_9BACL GCN5-related N-acetyltransferase 232 8e-60 Q97F20.1 Q97F20_CLOAB Predicted acetyltransferase 178 1e-43 A6LYI8.1 A6LYI8_CLOB8 GCN5-related N-acetyltransferase 176 4e-43 B1HYF4.1 B1HYF4_LYSSC Hypothetical acetyltransferase yjgM EC=2.3... 160 3e-38 C3FAJ7.1 C3FAJ7_BACTU Acetyltransferase, GNAT 147 3e-34 >B1D9I9.1 B1D9I9_9BACL GCN5-related N-acetyltransferase Length = 157 Score = 232 bits (592), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 109/160 (68%), Positives = 132/160 (82%), Gaps = 3/160 (1%) Query: 1 MNIRLIEYKDNSSIEHIIRVCLIEFGGNREGLAWADASMHDLYHYYKEPNRAYWIVEEDG 60 M IR ++ KDN++IE +IR CLIEFGGNREGLAWAD S+ L YY RAYW++E+DG Sbjct: 1 MIIRELQEKDNAAIERVIRECLIEFGGNREGLAWADESLSHLSDYYNRAGRAYWVIEQDG 60 Query: 61 KVLGGCGIAPFAESDQVCELQKMYLSTSIRGSGIAVELLQTALDFAALHYKQCYLETLQS 120 +V+GGCGIAPFA+S++VCELQKMYL ++RG+G+AV+LL TAL FA L+YKQCYLETLQ+ Sbjct: 61 EVVGGCGIAPFADSEEVCELQKMYLFPAVRGTGMAVKLLDTALAFARLYYKQCYLETLQN 120 Query: 121 MHAANRFYRKNGFTLLXXXXSPLGGSEHFACDAWYIKSLE 160 MHAANRFY K+GF L +PL GSEHFACDAWYIK LE Sbjct: 121 MHAANRFYAKHGFESL---AAPLAGSEHFACDAWYIKGLE 157 >Q97F20.1 Q97F20_CLOAB Predicted acetyltransferase Length = 156 Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 83/159 (52%), Positives = 105/159 (66%), Gaps = 3/159 (1%) Query: 1 MNIRLIEYKDNSSIEHIIRVCLIEFGGNREGLAWADASMHDLYHYYKEPNRAYWIVEEDG 60 M IR IE KDN +E +IR CLIEFG ++ G AW D + Y Y++ YW+VEE+G Sbjct: 1 MLIREIEKKDNEQVETLIRTCLIEFGADKPGCAWTDPDLGRFYEIYQDKKSKYWVVEEEG 60 Query: 61 KVLGGCGIAPFAESDQVCELQKMYLSTSIRGSGIAVELLQTALDFAALHYKQCYLETLQS 120 K++ GCGI P ++ VCELQKMY RG+GIA +LL ALDFA +Y +CYLET + Sbjct: 61 KIIAGCGIGPLNGAENVCELQKMYSYKEARGTGIAKDLLGLALDFAKKYYDKCYLETFSN 120 Query: 121 MHAANRFYRKNGFTLLXXXXSPLGGSEHFACDAWYIKSL 159 M AAN+FY KNGF L PL ++H+ACD WYIK L Sbjct: 121 MTAANKFYVKNGFKKL---EKPLIETDHYACDVWYIKEL 156 >A6LYI8.1 A6LYI8_CLOB8 GCN5-related N-acetyltransferase Length = 156 Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 84/159 (52%), Positives = 104/159 (65%), Gaps = 3/159 (1%) Query: 1 MNIRLIEYKDNSSIEHIIRVCLIEFGGNREGLAWADASMHDLYHYYKEPNRAYWIVEEDG 60 M IR I+ KDN +E +IR CLIEFG N+ G AW+D ++ Y Y YW+VEE+G Sbjct: 1 MIIREIQEKDNEQVESLIRTCLIEFGANKPGCAWSDPNLGCFYQVYSCEKSKYWVVEENG 60 Query: 61 KVLGGCGIAPFAESDQVCELQKMYLSTSIRGSGIAVELLQTALDFAALHYKQCYLETLQS 120 K++ GCGI P ++ VCELQKMY RGSGIA +LL +L+FA HYK+CYLET + Sbjct: 61 KIVAGCGIGPLLGTEDVCELQKMYSLKETRGSGIAKKLLGLSLEFAREHYKKCYLETFDN 120 Query: 121 MHAANRFYRKNGFTLLXXXXSPLGGSEHFACDAWYIKSL 159 M AA RFY KN F L PL +EH+ACD WYIK L Sbjct: 121 MEAAKRFYEKNKFLRL---EKPLVETEHYACDVWYIKEL 156 >B1HYF4.1 B1HYF4_LYSSC Hypothetical acetyltransferase yjgM EC=2.3.1.- Length = 158 Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 81/160 (50%), Positives = 109/160 (68%), Gaps = 4/160 (2%) Query: 1 MNIRLIEYKDNSSIEHIIRVCLIEFGGNREGLAWADASMHDLYHYYKEPNRA-YWIVEED 59 M I+ I+ +DN+ ++ II+ L G G A+ D+ ++DLY YY A YW+VE D Sbjct: 1 MIIQEIKKEDNAKVKEIIQDSLESLGLAVPGSAYFDSQLNDLYQYYNNLKHANYWVVELD 60 Query: 60 GKVLGGCGIAPFAESDQVCELQKMYLSTSIRGSGIAVELLQTALDFAALHYKQCYLETLQ 119 GKV+GG GIAPF+E D+VCELQK+YLS ++G GI+ +L++TAL FA+ HY++CYLET+ Sbjct: 61 GKVVGGIGIAPFSEQDKVCELQKLYLSPKVQGLGISKKLMETALSFASKHYEKCYLETMH 120 Query: 120 SMHAANRFYRKNGFTLLXXXXSPLGGSEHFACDAWYIKSL 159 + A Y K GFTLL PL GSEH A DAWY+K L Sbjct: 121 ELKTACILYEKFGFTLL---QEPLPGSEHSAMDAWYLKDL 157 >C3FAJ7.1 C3FAJ7_BACTU Acetyltransferase, GNAT Length = 159 Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 75/160 (46%), Positives = 104/160 (65%), Gaps = 4/160 (2%) Query: 1 MNIRLIEYKDNSSIEHIIRVCLIEFGGNREGLAWADASMHDLYHYYKEPNRA-YWIVEED 59 M IR ++ +DN+ I+ II+ L G G A+ D ++DL+ YY A YW+VE + Sbjct: 1 MIIRKMKKEDNAKIKEIIQDSLKSLGLAIPGTAYFDPQLNDLHQYYNNLKHANYWVVEME 60 Query: 60 GKVLGGCGIAPFAESDQVCELQKMYLSTSIRGSGIAVELLQTALDFAALHYKQCYLETLQ 119 G+V+GG GIAPF E D++CELQK+YLS +G G++ +L++TAL FA+ HY++CYLET+ Sbjct: 61 GEVVGGIGIAPFNEHDKICELQKLYLSPKAQGLGLSKKLMETALSFASKHYEKCYLETMH 120 Query: 120 SMHAANRFYRKNGFTLLXXXXSPLGGSEHFACDAWYIKSL 159 + A Y K GF LL PL GSEH +AWYIKS Sbjct: 121 ELKTACLLYEKFGFILL---NEPLPGSEHATMNAWYIKSF 157 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.322 0.137 0.431 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 973,509,196 Number of extensions: 36451182 Number of successful extensions: 70501 Number of sequences better than 1.0e-05: 297 Number of HSP's gapped: 70222 Number of HSP's successfully gapped: 297 Length of query: 161 Length of database: 3,060,696,203 Length adjustment: 121 Effective length of query: 40 Effective length of database: 1,920,753,388 Effective search space: 76830135520 Effective search space used: 76830135520 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 126 (53.1 bits)