BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0340.0020.p (170 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q24XD8.1 Q24XD8_DESHY Putative uncharacterized protein 267 2e-70 B8FW61.1 B8FW61_DESHD Short-chain dehydrogenase/reductase SDR 266 4e-70 A4IMS2.1 A4IMS2_GEOTN 3-oxoacyl-(Acyl carrier protein) reductase... 254 1e-66 B4BKN3.1 B4BKN3_9BACI Short-chain dehydrogenase/reductase SDR 254 1e-66 B1YGL7.1 B1YGL7_EXIS2 Short-chain dehydrogenase/reductase SDR 251 2e-65 >Q24XD8.1 Q24XD8_DESHY Putative uncharacterized protein Length = 252 Score = 267 bits (683), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 124/170 (72%), Positives = 145/170 (85%) Query: 1 LDILVNNAGIMDNFEPAGDIADADWERIFAVNTTSVMRATRKALTVFLPKEKGVILNVAS 60 +DILVNNAGIMDNFEPA DI D +WERIFAVNTTSVMRATRK L +FL K GVI+N+AS Sbjct: 83 VDILVNNAGIMDNFEPAADIEDKNWERIFAVNTTSVMRATRKVLPIFLEKSSGVIVNIAS 142 Query: 61 IGGLFGARAGAAYTASKHAVVGFTKNTGYMYAKSGIRCNAIAPGGVETNIGSSMTHINEF 120 GGL GARAGA YTASKHAV+GFTKNTG+MYA+ GIRCNAIAPG VETNIGS++T ++F Sbjct: 143 AGGLNGARAGATYTASKHAVIGFTKNTGFMYAQQGIRCNAIAPGAVETNIGSTITAPHKF 202 Query: 121 GMGRTQPGMAINPRMGQPGEVAQLALFLASDEAGFINGVVVTADGGWTAY 170 G R GMA NPRMG+P E+AQ+ALFLA++E+ F+NG V+ ADGGW+AY Sbjct: 203 GSARAYAGMATNPRMGKPEEIAQVALFLAAEESSFVNGAVIVADGGWSAY 252 >B8FW61.1 B8FW61_DESHD Short-chain dehydrogenase/reductase SDR Length = 252 Score = 266 bits (681), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 124/170 (72%), Positives = 144/170 (84%) Query: 1 LDILVNNAGIMDNFEPAGDIADADWERIFAVNTTSVMRATRKALTVFLPKEKGVILNVAS 60 +DI VNNAGIMDNFEPA DI D +WERIFAVNTTSVMRATRK L +FL K GVI+NVAS Sbjct: 83 VDIFVNNAGIMDNFEPAADIEDKNWERIFAVNTTSVMRATRKVLPIFLEKSSGVIVNVAS 142 Query: 61 IGGLFGARAGAAYTASKHAVVGFTKNTGYMYAKSGIRCNAIAPGGVETNIGSSMTHINEF 120 GGL GARAGA YTASKHAV+GFTKNTG+MYA+ GIRCNAIAPG VETNIGS++T ++F Sbjct: 143 AGGLNGARAGATYTASKHAVIGFTKNTGFMYAQQGIRCNAIAPGAVETNIGSTITDPHKF 202 Query: 121 GMGRTQPGMAINPRMGQPGEVAQLALFLASDEAGFINGVVVTADGGWTAY 170 G R GMA NPRMG+P E+AQ+ALFLA++E+ F+NG V+ ADGGW+AY Sbjct: 203 GSARAYAGMATNPRMGKPEEIAQVALFLAAEESSFVNGAVIVADGGWSAY 252 >A4IMS2.1 A4IMS2_GEOTN 3-oxoacyl-(Acyl carrier protein) reductase-like protein Length = 252 Score = 254 bits (650), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 118/170 (69%), Positives = 142/170 (83%) Query: 1 LDILVNNAGIMDNFEPAGDIADADWERIFAVNTTSVMRATRKALTVFLPKEKGVILNVAS 60 LDILVNNAGIMDNF PA D+ D WE++FAVNTTSVMRATRKAL++FL K+ GVI+N+AS Sbjct: 83 LDILVNNAGIMDNFVPAADVTDEWWEKVFAVNTTSVMRATRKALSIFLSKKSGVIINIAS 142 Query: 61 IGGLFGARAGAAYTASKHAVVGFTKNTGYMYAKSGIRCNAIAPGGVETNIGSSMTHINEF 120 +GGL G+RAGAAYTASKHAV+G TKN G+ YAK GIRCNAIAPGGV TNIG+++T + F Sbjct: 143 VGGLNGSRAGAAYTASKHAVIGLTKNVGFQYAKEGIRCNAIAPGGVSTNIGATITAPHPF 202 Query: 121 GMGRTQPGMAINPRMGQPGEVAQLALFLASDEAGFINGVVVTADGGWTAY 170 GM R G +NPR G+P E+A++ALFLASD++ FING V+ AD GWTAY Sbjct: 203 GMERATAGSHLNPRTGEPEEIAKIALFLASDDSSFINGAVIVADSGWTAY 252 >B4BKN3.1 B4BKN3_9BACI Short-chain dehydrogenase/reductase SDR Length = 252 Score = 254 bits (650), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 118/170 (69%), Positives = 142/170 (83%) Query: 1 LDILVNNAGIMDNFEPAGDIADADWERIFAVNTTSVMRATRKALTVFLPKEKGVILNVAS 60 LDILVNNAGIMDNF PA D+ D WE++FAVNTTSVMRATRKAL++FL K+ GVI+N+AS Sbjct: 83 LDILVNNAGIMDNFVPAADVTDEWWEKVFAVNTTSVMRATRKALSIFLSKKSGVIINIAS 142 Query: 61 IGGLFGARAGAAYTASKHAVVGFTKNTGYMYAKSGIRCNAIAPGGVETNIGSSMTHINEF 120 +GGL G+RAGAAYTASKHAV+G TKN G+ YAK GIRCNAIAPGGV TNIG+++T + F Sbjct: 143 VGGLNGSRAGAAYTASKHAVIGLTKNVGFQYAKEGIRCNAIAPGGVSTNIGATITAPHPF 202 Query: 121 GMGRTQPGMAINPRMGQPGEVAQLALFLASDEAGFINGVVVTADGGWTAY 170 GM R G +NPR G+P E+A++ALFLASD++ FING V+ AD GWTAY Sbjct: 203 GMERATAGAHLNPRTGEPEEIAKIALFLASDDSSFINGAVIVADSGWTAY 252 >B1YGL7.1 B1YGL7_EXIS2 Short-chain dehydrogenase/reductase SDR Length = 252 Score = 251 bits (641), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 119/170 (70%), Positives = 138/170 (81%) Query: 1 LDILVNNAGIMDNFEPAGDIADADWERIFAVNTTSVMRATRKALTVFLPKEKGVILNVAS 60 LD+LVNNAGIMD E GDI+D WER+F+VNTT+VMRA R A+ +F + GVILN S Sbjct: 83 LDVLVNNAGIMDGMEGVGDISDERWERVFSVNTTAVMRAMRLAVPLFQKQGHGVILNNIS 142 Query: 61 IGGLFGARAGAAYTASKHAVVGFTKNTGYMYAKSGIRCNAIAPGGVETNIGSSMTHINEF 120 IGGL GARAGAAYTASKHAVVG TKNT Y+YAK GIRCN IAPG VETNIG SMT+INEF Sbjct: 143 IGGLNGARAGAAYTASKHAVVGLTKNTAYLYAKEGIRCNGIAPGAVETNIGQSMTNINEF 202 Query: 121 GMGRTQPGMAINPRMGQPGEVAQLALFLASDEAGFINGVVVTADGGWTAY 170 GMGRT GM +NPR +P E+A+LALFL S+E+ F+NG +V ADGGW+AY Sbjct: 203 GMGRTMLGMGLNPRSAKPEEIARLALFLVSEESSFVNGAIVIADGGWSAY 252 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.135 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,017,374,520 Number of extensions: 39820140 Number of successful extensions: 157077 Number of sequences better than 1.0e-05: 21635 Number of HSP's gapped: 134679 Number of HSP's successfully gapped: 21691 Length of query: 170 Length of database: 3,060,696,203 Length adjustment: 126 Effective length of query: 44 Effective length of database: 1,873,648,313 Effective search space: 82440525772 Effective search space used: 82440525772 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 126 (53.1 bits)