BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0340.0007.p (350 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K622.1 B3K622_9BACI Anthranilate phosphoribosyltransferase EC=... 432 e-119 B1DBZ2.1 B1DBZ2_9BACL Anthranilate phosphoribosyltransferase EC=... 419 e-115 Q65F97.1 Q65F97_BACLD Putative uncharacterized protein 167 1e-39 Q62QR3.1 Q62QR3_BACLD Anthranilate phosphoribosyltransferase 167 1e-39 C1ZW02.1 C1ZW02_RHOMR Anthranilate phosphoribosyltransferase 145 5e-33 >B3K622.1 B3K622_9BACI Anthranilate phosphoribosyltransferase EC=2.4.2.18 Length = 354 Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust. Identities = 205/349 (58%), Positives = 253/349 (72%), Gaps = 1/349 (0%) Query: 1 MINILKEVARGKRGARDLSYQEAESAAEAILGLTASPVQIGAFLIAERIKLESIEELEAF 60 MI++LKEV RGKRGARDL+Y+EA AA +ILG A+P QIGAF IAERIK+ES+EELEAF Sbjct: 1 MIHLLKEVGRGKRGARDLTYEEALQAAASILGAQATPAQIGAFFIAERIKMESVEELEAF 60 Query: 61 VSVCRKYAHREPVQQGLDCAGPYDGRKKSXXXXXXXXXXXXXXGLPVTLHGSASLPPKWG 120 V V R+YA R + G+DCAGPYDGRK S LPVTLHG+ASLPPKWG Sbjct: 61 VKVSREYADRSFLHAGIDCAGPYDGRKSSFFSTLATAFVLAAADLPVTLHGTASLPPKWG 120 Query: 121 ITLQDIIQESGIEVTALSRAEMVESAGKSGVLYAHSEAWCPPLASLRHLREDLGMRTIFN 180 ITL DI+ GI AL++ + +A ++GVLY +E WCPPL LR +RE+LGMRT+ N Sbjct: 121 ITLSDILAAKGITGPALAKDSCIRAAKRTGVLYVDAEEWCPPLKQLRPIREELGMRTVLN 180 Query: 181 TVEKFIDYACSPYIVFGIYHNTVFDRISRMILKLGYRKGLVVQGAEGSEDLYIDRPNRVY 240 T EKF+DY+ SPY+ FG+YHNTVFDR+SR+I+KL YRK +++QG+EGS++L+I RP R Y Sbjct: 181 TAEKFVDYSHSPYLTFGVYHNTVFDRLSRLIMKLDYRKAIIIQGSEGSDELFIHRPTRTY 240 Query: 241 YVADGTAHLDIIDPELLGLETPVPEMDWTPRLQLSAAEAVLQGGGHIAFYNQVLLNGAAR 300 + +G A L IIDPE GL+ PVPE+ WTP Q A VL G G +AF QVLLNGA R Sbjct: 241 RIENGKASLQIIDPEAYGLDVPVPEISWTPSEQADATAEVLLGKGDLAFIYQVLLNGAVR 300 Query: 301 LHLAGKVNSIEEGVYTCKHLLDNGDAWAVYMKWRSALLGSKTPSESGLS 349 L LA KV S+EEG+YTCK LLD+G W +Y KW S L+ S TP +S Sbjct: 301 LQLADKVRSVEEGIYTCKALLDSGKPWELYSKWLSLLIES-TPKGDAVS 348 >B1DBZ2.1 B1DBZ2_9BACL Anthranilate phosphoribosyltransferase EC=2.4.2.18 Length = 352 Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust. Identities = 194/348 (55%), Positives = 249/348 (71%), Gaps = 1/348 (0%) Query: 1 MINILKEVARGKRGARDLSYQEAESAAEAILGLTASPVQIGAFLIAERIKLESIEELEAF 60 +LKEV RGKRGARDL+Y+EA AA+ I+ A+P Q+GAF IAERIK+ES+EELEAF Sbjct: 2 FTKLLKEVGRGKRGARDLTYEEALEAADWIMNRKATPAQMGAFFIAERIKMESVEELEAF 61 Query: 61 VSVCRKYAHREPVQQGLDCAGPYDGRKKSXXXXXXXXXXXXXXGLPVTLHGSASLPPKWG 120 V+VCR A+R P+Q+GLDCAGPYDGR K+ GLPVTLHG+ SLPPKWG Sbjct: 62 VNVCRNSAYRAPIQEGLDCAGPYDGRVKTFFASFATAFLLASAGLPVTLHGAKSLPPKWG 121 Query: 121 ITLQDIIQESGIEVTALSRAEMVESAGKSGVLYAHSEAWCPPLASLRHLREDLGMRTIFN 180 +TL D++ E GI L+R +V +A +GVL+ +E WCPPL LR +RE+LGMRT+ N Sbjct: 122 VTLLDMLAELGIGKAQLTRDRVVHAAKATGVLFVDTEEWCPPLGELRDIREELGMRTVLN 181 Query: 181 TVEKFIDYACSPYIVFGIYHNTVFDRISRMILKLGYRKGLVVQGAEGSEDLYIDRPNRVY 240 T EK ID++ SPY+VFG++HNTVFDR+S+++ L YR+ L+VQG EGSEDL+I+RP R Y Sbjct: 182 TAEKLIDFSHSPYLVFGVFHNTVFDRMSKLLTDLKYRRALIVQGTEGSEDLFIERPTRTY 241 Query: 241 YVADGTAHLDIIDPELLGLETPVPE-MDWTPRLQLSAAEAVLQGGGHIAFYNQVLLNGAA 299 V +G A L +IDPE G+E +PE +W+ Q+ A+AVLQG HI + NQVLLN A Sbjct: 242 IVENGEARLHVIDPEEFGMEATLPEKTEWSAAEQIETAQAVLQGKAHIGYVNQVLLNAAV 301 Query: 300 RLHLAGKVNSIEEGVYTCKHLLDNGDAWAVYMKWRSALLGSKTPSESG 347 RL LA + S+EE +Y CK LLD+G AW Y WRS+LL TP+ G Sbjct: 302 RLRLADRSESVEEALYQCKALLDSGAAWERYTAWRSSLLSEGTPAPIG 349 >Q65F97.1 Q65F97_BACLD Putative uncharacterized protein Length = 246 Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 89/225 (39%), Positives = 134/225 (59%), Gaps = 7/225 (3%) Query: 5 LKEVARGKRGARDLSYQEAESAAEAILGLTASPVQIGAFLIAERIKLESIEELEAFVSVC 64 +KEVARGKRGARDL+Y+EA AAEAI+ ASP Q A LIAERIK ES EEL AF Sbjct: 7 IKEVARGKRGARDLTYEEARQAAEAIVTGNASPAQTAALLIAERIKTESPEELFAFTEAL 66 Query: 65 RKYAH-----REPVQQGLDCAGPYDGRKKSXXXXXXXXXXXXXXGLPVTLHGSASLPPKW 119 R + R + +D AGPY GR S G+P LHGS +LPPK+ Sbjct: 67 RNSSESLSLSRAVKEAVIDFAGPYTGR-HSFLATIPVSLLLAGNGVPAFLHGSDALPPKY 125 Query: 120 GITLQDIIQESGIEVTALSRAEMVESAGKSGVLYAHSEAWCPPLASLRHLREDLGMRTIF 179 G +++D++ + GI + + A+ S K+ + +A +E +C P +R +RE++G+RT+ Sbjct: 126 GTSVKDVLDKLGIP-SETAPAQTARSLEKALIGFAAAETFCKPFVRMRKIREEIGVRTVL 184 Query: 180 NTVEKFIDYACSPYIVFGIYHNTVFDRISRMILKLGYRKGLVVQG 224 NT EK ++++ + ++ G +H T ++ + +L Y++ +VQG Sbjct: 185 NTAEKLVNFSDADKLMMGAFHRTAIQKMHPVFQRLTYKEVFIVQG 229 >Q62QR3.1 Q62QR3_BACLD Anthranilate phosphoribosyltransferase Length = 244 Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 90/229 (39%), Positives = 135/229 (58%), Gaps = 7/229 (3%) Query: 1 MINILKEVARGKRGARDLSYQEAESAAEAILGLTASPVQIGAFLIAERIKLESIEELEAF 60 M +KEVARGKRGARDL+Y+EA AAEAI+ ASP Q A LIAERIK ES EEL AF Sbjct: 1 MQQWIKEVARGKRGARDLTYEEARQAAEAIVTGNASPAQTAALLIAERIKTESPEELFAF 60 Query: 61 VSVCRKYAH-----REPVQQGLDCAGPYDGRKKSXXXXXXXXXXXXXXGLPVTLHGSASL 115 R + R + +D AGPY GR S G+P LHGS +L Sbjct: 61 TEALRNSSESLSLSRAVKEAVIDFAGPYTGR-HSFLATIPVSLLLAGNGVPAFLHGSDAL 119 Query: 116 PPKWGITLQDIIQESGIEVTALSRAEMVESAGKSGVLYAHSEAWCPPLASLRHLREDLGM 175 PPK+G +++D++ + GI + + A+ S K+ + +A +E +C P +R +RE++G+ Sbjct: 120 PPKYGTSVKDVLDKLGIP-SETAPAQTARSLEKALIGFAAAETFCKPFVRMRKIREEIGV 178 Query: 176 RTIFNTVEKFIDYACSPYIVFGIYHNTVFDRISRMILKLGYRKGLVVQG 224 RT+ NT EK ++++ + ++ G +H T ++ + +L Y++ +VQG Sbjct: 179 RTVLNTAEKLVNFSDADKLMMGAFHRTAIQKMHPVFQRLTYKEVFIVQG 227 >C1ZW02.1 C1ZW02_RHOMR Anthranilate phosphoribosyltransferase Length = 346 Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 98/336 (29%), Positives = 161/336 (47%), Gaps = 7/336 (2%) Query: 1 MINILKEVARGKRGARDLSYQEAESAAEAILGLTASPVQIGAFLIAERIKLESIEELEAF 60 I ++ V RG++ RDL+ +EA A +L TA+P QIGAFLI +R+K E+ +E+E F Sbjct: 4 FIPYVQAVGRGEKLKRDLTREEAREAMRLMLDGTATPAQIGAFLITQRVKGETADEIEGF 63 Query: 61 VSVCRKYAH--REPVQQGLDCAGPYDGRKKSXXXXXXXXXXXXXXGLPVTLHGSASLPPK 118 V R + R V LD PYDG+ ++ G PV LHG+ +P K Sbjct: 64 VEAARTFCQQIRPRVPNLLDLGVPYDGKARTPQLAPAIALIVAATGQPVVLHGAPGVPTK 123 Query: 119 WGITLQDIIQESGIEVTALSRAEMVESAGKSGVLYAHSEAWCPPLASLRHLREDLGMRTI 178 G+T +++ GI A + G+ Y H+ + P +L +R+ G+RT Sbjct: 124 QGVTPAHVLEALGIPAEQAPEA-VAHQLETLGIGYLHAPRFAPAWHALTPVRQQFGLRTA 182 Query: 179 FNTVEKFIDYACSPYIVFGIYHNTVFDRISRMILKLGYRKGLVVQGAEGSEDLYIDRPNR 238 NTVEK ++ A + V G +H R+ + +L + +VQG EGS + R R Sbjct: 183 LNTVEKLLNPANASRCVAGFFHRNYLLRMRAAVQRL-FPGSWLVQGIEGSIECRAGRTTR 241 Query: 239 VYYVADGTAHLDIIDPELLGLETP-VPEMDWTPRLQLSAAEAVLQGGGHIAFYNQVLLNG 297 + Y AD A +++ LG TP E+ + ++L + + LL Sbjct: 242 L-YPADEAAEPLVVEAPRLGFATPDDTEVPADAAIHAEITRSIL-ADRPSSSRDTALLTA 299 Query: 298 AARLHLAGKVNSIEEGVYTCKHLLDNGDAWAVYMKW 333 L+++G+ + + +GV + L +G A+ + +W Sbjct: 300 GVLLYVSGRADRLADGVEQARAALADGKAFRLLQQW 335 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.136 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,001,176,888 Number of extensions: 79228386 Number of successful extensions: 182899 Number of sequences better than 1.0e-05: 1508 Number of HSP's gapped: 181218 Number of HSP's successfully gapped: 1508 Length of query: 350 Length of database: 3,060,696,203 Length adjustment: 136 Effective length of query: 214 Effective length of database: 1,779,438,163 Effective search space: 380799766882 Effective search space used: 380799766882 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 132 (55.5 bits)