BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0337.0022.p (431 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DH11.1 B1DH11_9BACL Dyp-type peroxidase family 511 e-143 C0Z8T8.1 C0Z8T8_BREBN Putative uncharacterized protein 475 e-132 B1YH04.1 B1YH04_EXIS2 Dyp-type peroxidase family 385 e-105 C1RDM3.1 C1RDM3_9ACTO Tat-translocated enzyme 362 3e-98 A6WDC5.1 A6WDC5_KINRD Dyp-type peroxidase family 357 1e-96 >B1DH11.1 B1DH11_9BACL Dyp-type peroxidase family Length = 429 Score = 511 bits (1316), Expect = e-143, Method: Compositional matrix adjust. Identities = 254/429 (59%), Positives = 299/429 (69%), Gaps = 4/429 (0%) Query: 4 TDNKDVK-GAPIFNKKLSRREMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQVS 62 TDNK+ + G I K++SRR++ P S Sbjct: 3 TDNKNNQAGDSILEKRISRRDILRLAGVGGAGLLLGASGVGAIFGAKGSTVSGAAKP--S 60 Query: 63 SADVIPFYGSHQAGILTPAQNFLCFAAFDLTTTKLADVQKXXXXXXXXXXXXXXXXXXXX 122 S D I FYG HQAGI TPAQ+FL FAAFDLTT + DV+K Sbjct: 61 SEDRIDFYGKHQAGITTPAQDFLMFAAFDLTTKSVDDVRKLFKAWTEASASMARGEMIGE 120 Query: 123 XNDNPNLPPTDTGEADGLTPSKCTLTFGAGPAMFDGRFGLAAKRPSTLAELPPFAGDSLE 182 NDN NLPP DTGEA GL PSK T+TFG GP+ FD RFGLA+KRP+ L +LP F GD L Sbjct: 121 VNDNLNLPPADTGEAAGLNPSKTTITFGVGPSFFDARFGLASKRPAALVDLPAFGGDELR 180 Query: 183 PQWCGGDLCVQACADDMQVAFHAIRNLARIARGTAVLRWTQEGFQRTGNADPKGGTPRNL 242 +WCGGD+ VQ A+DMQ AFHAIRNLARIARG AVLRWTQEGFQRTG ADPKG TPRNL Sbjct: 181 EEWCGGDIGVQVNANDMQTAFHAIRNLARIARGKAVLRWTQEGFQRTGGADPKGATPRNL 240 Query: 243 LGFKDGTGNPDVTDDAEMREVVWCGS-ESPAWMQGGTYMAVRRVRLRIEVWDRSTLSDQE 301 +GFKDGTGNPD D+A M +VVW S + WM GG+YM VRR+R+R+EVWDRSTL DQE Sbjct: 241 MGFKDGTGNPDTKDEALMNDVVWAQSGDGTPWMAGGSYMVVRRIRIRVEVWDRSTLGDQE 300 Query: 302 ATFGRHRQSGAPIGATDEFAKLNLDAADAEGKPVIPPDSHSALAHGDGTVKMLRRSYSFS 361 ATFGRHR SGAPIG+ +EF ++L D +GKP+IP +SH ALA G+G+VK+LRRSYS+S Sbjct: 301 ATFGRHRDSGAPIGSKNEFDSVDLAKKDEKGKPLIPVNSHVALARGNGSVKILRRSYSYS 360 Query: 362 SGMDLTTGQLDAGLLFISFQKDLVKQFVSIQKRLSKSDRLNEYMVHTGSAVFACFPGVRE 421 SGMD TGQ DAGLLFI + +D KQF+ +Q++L + D LNEY+VH GSAVFACFPGVRE Sbjct: 361 SGMDNRTGQFDAGLLFICYNRDTRKQFIPMQQKLGQMDALNEYIVHNGSAVFACFPGVRE 420 Query: 422 GGYIGETLL 430 GGYIG+TLL Sbjct: 421 GGYIGDTLL 429 >C0Z8T8.1 C0Z8T8_BREBN Putative uncharacterized protein Length = 425 Score = 475 bits (1222), Expect = e-132, Method: Compositional matrix adjust. Identities = 224/367 (61%), Positives = 269/367 (73%), Gaps = 1/367 (0%) Query: 65 DVIPFYGSHQAGILTPAQNFLCFAAFDLTTTKLADVQKXXXXXXXXXXXXXXXXXXXXXN 124 +VIPFYG HQ+GI+TP Q+F+C AFDLTTT L DV+ + Sbjct: 59 EVIPFYGKHQSGIITPMQDFICMGAFDLTTTSLGDVRSLFQSWTQAAARMTAGKSVDEES 118 Query: 125 DNPNLPPTDTGEADGLTPSKCTLTFGAGPAMFDGRFGLAAKRPSTLAELPPFAGDSLEPQ 184 D+ LPP DTGEA GL P K T+TFG G + FD RFGLA+KRP+ L +LP F D + + Sbjct: 119 DHALLPPVDTGEAMGLRPMKLTITFGLGASFFDERFGLASKRPAPLVDLPRFNSDEMRKE 178 Query: 185 WCGGDLCVQACADDMQVAFHAIRNLARIARGTAVLRWTQEGFQRTGNADPKGGTPRNLLG 244 W GGD+ VQ CA+D QVAFHA+RNLARIARG AVL W QEGFQRT +DP G TPRNLLG Sbjct: 179 WSGGDIVVQVCANDPQVAFHALRNLARIARGKAVLHWLQEGFQRTSASDPTGSTPRNLLG 238 Query: 245 FKDGTGNPDVTDDAEMREVVWCGS-ESPAWMQGGTYMAVRRVRLRIEVWDRSTLSDQEAT 303 FKDGT NP V D A EVVW + ESPAWM GG+YM +RR+R+RIEVWDRSTL+DQE T Sbjct: 239 FKDGTNNPPVNDPATANEVVWANTAESPAWMAGGSYMVMRRIRMRIEVWDRSTLTDQENT 298 Query: 304 FGRHRQSGAPIGATDEFAKLNLDAADAEGKPVIPPDSHSALAHGDGTVKMLRRSYSFSSG 363 FGRHR +GAP+G +EF +L LD DA+GKPVIP +SH+ALAH +G VK+LRR YS+SSG Sbjct: 299 FGRHRLTGAPLGKANEFDELELDRKDAKGKPVIPVNSHTALAHMEGKVKILRRGYSYSSG 358 Query: 364 MDLTTGQLDAGLLFISFQKDLVKQFVSIQKRLSKSDRLNEYMVHTGSAVFACFPGVREGG 423 MDL TGQLDAGLLFI F +D KQF+ +Q++L+ D LNEY+ H GS ++AC PG EGG Sbjct: 359 MDLKTGQLDAGLLFICFNRDPRKQFIPMQQKLASVDLLNEYITHVGSGLYACLPGASEGG 418 Query: 424 YIGETLL 430 YIG+TL Sbjct: 419 YIGDTLF 425 >B1YH04.1 B1YH04_EXIS2 Dyp-type peroxidase family Length = 413 Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust. Identities = 190/373 (50%), Positives = 252/373 (67%), Gaps = 10/373 (2%) Query: 63 SADVIPFYGSHQAGILTPAQNFLCFAAFDLTTTK---LADVQKXXXXXXXXXXXXXXXXX 119 + + +PFYG +QAGILTP QN + AFD+ TT+ L D+ K Sbjct: 45 ATNQVPFYGKYQAGILTPPQNHVQIVAFDVQTTRRDELIDLLKRWTRACARLTAGLPLGD 104 Query: 120 XXXXNDNPNLPPTDTGEADGLTPSKCTLTFGAGPAMF-DGRFGLAAKRPSTLAELPPFAG 178 +D+ +PP DTGEA+GL+ S T TFG G +F D RF + KRP+ L ELP F Sbjct: 105 ----SDSLYVPPEDTGEAEGLSASHLTFTFGCGHGLFADDRFEIGHKRPNLLRELPAFDL 160 Query: 179 DSLEPQWCGGDLCVQACADDMQVAFHAIRNLARIARGTAVLRWTQEGFQRTGNADPKGGT 238 D L+P+W GGDL VQ CADD QV FHA+RNL RI RG +RWTQ GFQR+ AD GGT Sbjct: 161 DQLDPKWAGGDLVVQICADDQQVVFHALRNLTRIGRGIVKIRWTQTGFQRSKAADATGGT 220 Query: 239 PRNLLGFKDGTGNPDVTDDA-EMREVVWCGSESPAWMQGGTYMAVRRVRLRIEVWDRSTL 297 PRNL GFKDGTGNPDV+ A + + + + WM G+++ VRR+++ +EVWDR+ L Sbjct: 221 PRNLFGFKDGTGNPDVSQPAIRNKHLFYQWQDGSPWMTNGSFLVVRRIQMHLEVWDRTIL 280 Query: 298 SDQEATFGRHRQSGAPIGATDEFAKLNLDAADAEGKPVIPPDSHSALAHGDGTVKMLRRS 357 +QE TFGR R SGAP+G+ DEFA + A G+ +P DSH+A+AHG G ++LRRS Sbjct: 281 KEQERTFGRDRASGAPLGSKDEFASVTPSKRTARGEASLPKDSHTAVAHGSGEAQLLRRS 340 Query: 358 YSFSSGMDLTTGQLDAGLLFISFQKDLVKQFVSIQKRLSKSDRLNEYMVHTGSAVFACFP 417 YS+ +G++ TTG LDAGLLF+S+Q+ +QF++IQ+RL+ SDRLNEY+ H GSA+FACF Sbjct: 341 YSYQAGINETTGALDAGLLFLSYQRS-PEQFITIQRRLAASDRLNEYITHRGSALFACFG 399 Query: 418 GVREGGYIGETLL 430 G+++GGYIG+ L Sbjct: 400 GIQKGGYIGDALF 412 >C1RDM3.1 C1RDM3_9ACTO Tat-translocated enzyme Length = 435 Score = 362 bits (930), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 189/371 (50%), Positives = 239/371 (64%), Gaps = 5/371 (1%) Query: 65 DVIPFYGSHQAGILTPAQNFLCFAAFDLTTTKLADVQKXXXXXXXXXXXXXXXXXXXXXN 124 D++PFYG++QAGI TPAQ+ L FAAFD+T+ Q + Sbjct: 64 DIVPFYGANQAGIATPAQDRLAFAAFDVTSGSAQAFQVMLGTWAAAAAQMTKGLPVGAVD 123 Query: 125 DNPNLPPTDTGEADGLTPSKCTLTFGAGPAMFDGRFGLAAKRPSTLAELPPFAGD-SLEP 183 +NP PP DTGEADGL+ + T+T G GP++FD RFGLA KRP+ LA+LP GD SL+P Sbjct: 124 NNPQSPPIDTGEADGLSAAGLTITVGFGPSLFDHRFGLAGKRPAALADLPTLPGDGSLQP 183 Query: 184 QWCGGDLCVQACADDMQVAFHAIRNLARIARGTAVLRWTQEGFQRTGNADPKGGTPRNLL 243 GGDLCVQACADD VAFH IRN AR+ARGTAV+RW+Q GF RT + T RNL+ Sbjct: 184 ARSGGDLCVQACADDPTVAFHVIRNFARLARGTAVIRWSQLGFGRTSSTSDSQQTERNLM 243 Query: 244 GFKDGTGNPDVTDDAEMREVVWCGSES-PAWMQGGTYMAVRRVRLRIEVWDRSTLSDQEA 302 GFKDGT N ++R+ VW GSE+ AWM GG+Y+ RR+R+ IE WD LSDQE Sbjct: 244 GFKDGTRNIKAEAADDLRDHVWVGSETDQAWMTGGSYLVARRIRMLIESWDTDYLSDQEN 303 Query: 303 TFGRHRQSGAPIGATDEFAKLNLDAADAEGKPVIPPDSHSALA--HGDGTVKMLRRSYSF 360 FGR + SGAP+ EF +L A +G PVIP ++H LA + K+LRR YS+ Sbjct: 304 VFGRFKTSGAPLTGKSEFDTPDLAAKHTDGTPVIPLNAHIRLAGPETNNNQKILRRGYSY 363 Query: 361 SSGMDLTTGQLDAGLLFISFQKDLVKQFVSIQKRLSKSDRLNEYMVHTGSAVFACFPGVR 420 + G+D TG LDAGL F+++QKD +QFV IQ RL D LNEY+ HTGSA+FA PGV Sbjct: 364 TDGIDSATGLLDAGLFFLAYQKDPRRQFVPIQTRLGHQDNLNEYIRHTGSALFAVPPGVS 423 Query: 421 EGG-YIGETLL 430 G + G++L Sbjct: 424 AAGDWWGKSLF 434 >A6WDC5.1 A6WDC5_KINRD Dyp-type peroxidase family Length = 419 Score = 357 bits (916), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 186/375 (49%), Positives = 232/375 (61%), Gaps = 10/375 (2%) Query: 66 VIPFYGSHQAGILTPAQNFLCFAAFDLTTTK---LADVQKXXXXXXXXXXXXXXXXXXXX 122 +PF+G+ QAGI TPAQ+ L FAA D+TT++ LADV + Sbjct: 44 TVPFHGARQAGITTPAQDSLVFAALDVTTSRAGELADVLQRWSEAAATMATGAPVGGPGG 103 Query: 123 XNDNPNLPPTDTGEADGLTPSKCTLTFGAGPAMFDGRFGLAAKRPSTLAELPPFAGDSLE 182 + PP DTGEA L P+ T+T G GP++FDGRFGLA +RP+ L ELP G+ L+ Sbjct: 104 LGGAADEPPLDTGEAHELPPANLTVTLGYGPSLFDGRFGLAGRRPAALEELPALPGEQLD 163 Query: 183 PQWCGGDLCVQACADDMQVAFHAIRNLARIARGTAVLRWTQEGFQRTGNADPKGGTPRNL 242 P CGGDLC+QACADD QVAFHA+RNL RI RG +RW Q GF RT TPRNL Sbjct: 164 PTRCGGDLCLQACADDPQVAFHAVRNLVRIGRGVVAVRWVQLGFGRTATTSAGQPTPRNL 223 Query: 243 LGFKDGTGNPDVTDDAEMREVVWCGSE-SPA----WMQGGTYMAVRRVRLRIEVWDRSTL 297 +GFKDGT N D A + VW G E +PA WM+GGTY+ RR+R+ +E WDR+ L Sbjct: 224 MGFKDGTANLRAEDTAGLDRHVWVGGEGAPAADQEWMRGGTYLVARRIRMLVEAWDRAPL 283 Query: 298 SDQEATFGRHRQSGAPIGATDEFAKLNLDAADAEGKPVIPPDSHSALA--HGDGTVKMLR 355 +QE GR + SGAP+ T EF +L A G+PVI +H LA +G ++LR Sbjct: 284 GEQERVIGRAKVSGAPLTGTSEFDPPDLARTSATGEPVIDVAAHMRLAAPETNGGARILR 343 Query: 356 RSYSFSSGMDLTTGQLDAGLLFISFQKDLVKQFVSIQKRLSKSDRLNEYMVHTGSAVFAC 415 R YS++ G+DLTTGQLDAGL FI F D QFV+IQ+RL D L EY+ HTGSA+FAC Sbjct: 344 RGYSYTDGLDLTTGQLDAGLFFICFGNDPASQFVAIQRRLGARDGLTEYLKHTGSAIFAC 403 Query: 416 FPGVREGGYIGETLL 430 PG EG G+ L Sbjct: 404 PPGTAEGESWGQGLF 418 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.135 0.413 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,464,872,281 Number of extensions: 100079670 Number of successful extensions: 178405 Number of sequences better than 1.0e-05: 311 Number of HSP's gapped: 177000 Number of HSP's successfully gapped: 311 Length of query: 431 Length of database: 3,060,696,203 Length adjustment: 139 Effective length of query: 292 Effective length of database: 1,751,175,118 Effective search space: 511343134456 Effective search space used: 511343134456 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 133 (55.8 bits)