BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0337.0021.p (301 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DH10.1 B1DH10_9BACL Putative uncharacterized protein 333 1e-89 C0Z8T7.1 C0Z8T7_BREBN Putative uncharacterized protein 312 2e-83 B1YH05.1 B1YH05_EXIS2 Lipoprotein 289 2e-76 A3I7F9.1 A3I7F9_9BACI Putative lipoprotein 250 9e-65 B9DJC2.1 B9DJC2_STACT Putative uncharacterized protein 249 2e-64 >B1DH10.1 B1DH10_9BACL Putative uncharacterized protein Length = 287 Score = 333 bits (854), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 165/232 (71%), Positives = 185/232 (79%) Query: 69 QYRAYVIEQCDEFVKQTEAFTTAVKTGKLEDAKALYAPARMYYERIEPIAEALGDLDPNI 128 QYR Y ++Q D+ V +T+ F AVK+G +E AK+LYAP RMYYERIEPIAEALGDLDPNI Sbjct: 55 QYREYALDQTDKLVAETDKFVQAVKSGDVETAKSLYAPTRMYYERIEPIAEALGDLDPNI 114 Query: 129 DARENDVDPAEWRGFHKIEQALWQKNSTDGVTGTADQLLKDAQLLRAKVETVDIDESLLV 188 DARENDV+ +WRGFH+IEQALW NST G A QLL D + LRA +ETVD++ SLLV Sbjct: 115 DARENDVEEKDWRGFHRIEQALWVNNSTAGAEDYASQLLDDTKTLRALIETVDVEPSLLV 174 Query: 189 TGAVELLNEVSSSKVTGEEERYSHTDLYDFVANVEGAQKIYELLKPELTKKDPSLAQTIG 248 TGAVELLNEVSSSKVTGEEERYSHTDLYDF ANVEGA KIYELLK EL K+D L IG Sbjct: 175 TGAVELLNEVSSSKVTGEEERYSHTDLYDFAANVEGANKIYELLKAELNKQDAELEAQIG 234 Query: 249 ERFDALLAELAPFKSGDGYVSYETLKEDEVRKLSQNLDALAEPLSNMGTILG 300 FD L LA +KSGDGYVSY LKE++ +KLSQ LDALAEPLS MGTILG Sbjct: 235 TSFDNLEQALAAYKSGDGYVSYTDLKEEDTKKLSQLLDALAEPLSQMGTILG 286 >C0Z8T7.1 C0Z8T7_BREBN Putative uncharacterized protein Length = 297 Score = 312 bits (800), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 153/234 (65%), Positives = 185/234 (79%) Query: 67 IEQYRAYVIEQCDEFVKQTEAFTTAVKTGKLEDAKALYAPARMYYERIEPIAEALGDLDP 126 I+QYR +V++Q D+FVK TE+FT AVK G +E AK YAPAR Y+E+IEPIAE+LGD DP Sbjct: 63 IDQYRKWVVDQTDQFVKATESFTNAVKAGDMEKAKKEYAPARAYFEKIEPIAESLGDFDP 122 Query: 127 NIDARENDVDPAEWRGFHKIEQALWQKNSTDGVTGTADQLLKDAQLLRAKVETVDIDESL 186 IDARE DV EWRG+HK+E+ALW+ S ADQLL+D + LR KVE+V+ID + Sbjct: 123 WIDAREGDVPDNEWRGYHKLEKALWETKSVADQGKVADQLLQDVKQLRVKVESVEIDVPM 182 Query: 187 LVTGAVELLNEVSSSKVTGEEERYSHTDLYDFVANVEGAQKIYELLKPELTKKDPSLAQT 246 LVTG+VELLNEVSSSKVTGEEERYSHTDLYDF ANVEGA +IY++LKP +T+KD +LA Sbjct: 183 LVTGSVELLNEVSSSKVTGEEERYSHTDLYDFAANVEGAHEIYKVLKPAVTEKDAALATE 242 Query: 247 IGERFDALLAELAPFKSGDGYVSYETLKEDEVRKLSQNLDALAEPLSNMGTILG 300 I RF L LAP++ GDGYV Y LKED+V+KLSQ+LDALAEPLS MG I+G Sbjct: 243 IEARFADLDKALAPYRKGDGYVLYTELKEDQVKKLSQSLDALAEPLSKMGKIVG 296 >B1YH05.1 B1YH05_EXIS2 Lipoprotein Length = 276 Score = 289 bits (740), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 141/233 (60%), Positives = 176/233 (75%) Query: 67 IEQYRAYVIEQCDEFVKQTEAFTTAVKTGKLEDAKALYAPARMYYERIEPIAEALGDLDP 126 + YR Y I + ++F KQTEAFTTAVK G L +AKALYAP RM+YER EPIAE GDLDP Sbjct: 42 VADYRTYAIAELEQFTKQTEAFTTAVKEGDLAEAKALYAPTRMHYERAEPIAEVFGDLDP 101 Query: 127 NIDARENDVDPAEWRGFHKIEQALWQKNSTDGVTGTADQLLKDAQLLRAKVETVDIDESL 186 IDARE DV +EW G+H+IEQ L++K +T+G G ADQL++D LLRAKVETV++ L Sbjct: 102 KIDAREGDVKESEWGGYHRIEQGLFEKGTTEGYEGYADQLMQDVHLLRAKVETVEVTPEL 161 Query: 187 LVTGAVELLNEVSSSKVTGEEERYSHTDLYDFVANVEGAQKIYELLKPELTKKDPSLAQT 246 LVTGA +LLNEVS+SKVTGEE+RYSHTDLYDF ANV+GA+KIY+LL P L K+D +L++ Sbjct: 162 LVTGATDLLNEVSTSKVTGEEDRYSHTDLYDFAANVQGAEKIYQLLNPALQKQDAALSKE 221 Query: 247 IGERFDALLAELAPFKSGDGYVSYETLKEDEVRKLSQNLDALAEPLSNMGTIL 299 I RF + L K DGYV Y L + +V++LSQ ++ LAEPLS MG +L Sbjct: 222 IAARFADVNGLLEAKKKEDGYVLYTALSKADVKQLSQAINELAEPLSKMGIVL 274 >A3I7F9.1 A3I7F9_9BACI Putative lipoprotein Length = 289 Score = 250 bits (639), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 126/239 (52%), Positives = 166/239 (69%), Gaps = 6/239 (2%) Query: 67 IEQYRAYVIEQCDEFVKQTEAFTTAVKTGKLEDAKALYAPARMYYERIEPIAEALGDLDP 126 + Y+ + +EQ D+F+ +TE F VK G +E AKA YAPARMY+ER EPIAE+ GDLDP Sbjct: 50 LSDYQQFALEQMDQFLLETEKFVNLVKAGDIEGAKAAYAPARMYFERSEPIAESFGDLDP 109 Query: 127 NIDARENDVDPA-----EWRGFHKIEQALWQKNSTDGVTGTADQLLKDAQLLRAKVETVD 181 ID R D+ EW G+HK+E ALW++N+T G ADQLL DA+ L A V+TV+ Sbjct: 110 RIDGRLADIQEEGKGEEEWSGYHKLEYALWEENTTKGYESVADQLLADAKELHALVQTVE 169 Query: 182 IDESLLVTGAVELLNEVSSSKVTGEEERYSHTDLYDFVANVEGAQKIYELLKPELTKKDP 241 + L++TGAV+LLNEVS+SK+TGEEE YSHTDLYDF AN+EGA+KI+E+L+ +L KD Sbjct: 170 VTPDLMITGAVDLLNEVSTSKITGEEEIYSHTDLYDFKANIEGAEKIFEILRSKLEAKDS 229 Query: 242 SLAQTIGERFDALLAELAPFKSGD-GYVSYETLKEDEVRKLSQNLDALAEPLSNMGTIL 299 L + E+F A+ LA + D GY+SYE L ED + L+ ++ L EPLS MG IL Sbjct: 230 KLVTALDEKFKAVDDLLAQHATADGGYISYEELTEDNTKALAAAVNQLGEPLSQMGIIL 288 >B9DJC2.1 B9DJC2_STACT Putative uncharacterized protein Length = 284 Score = 249 bits (637), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 130/235 (55%), Positives = 163/235 (69%), Gaps = 5/235 (2%) Query: 69 QYRAYVIEQCDEFVKQTEAFTTAVKTGKLEDAKALYAPARMYYERIEPIAEALGDLDPNI 128 +Y+ Y +Q DEF+K TEAFT AVK E AK LY RMYYER EP+AE+ GDLDP I Sbjct: 48 EYKKYTDKQLDEFLKGTEAFTKAVKDKDTEKAKELYPKVRMYYERSEPVAESFGDLDPKI 107 Query: 129 DAR----ENDVDPAEWRGFHKIEQALWQKNSTDGVTGT-ADQLLKDAQLLRAKVETVDID 183 DAR + D EW G+HKIE+AL+Q N + T ADQLLKDA+ L AK +T++I Sbjct: 108 DARLADMKEDNKENEWTGYHKIEKALYQDNQLNAQTDKDADQLLKDAKELDAKADTLEIT 167 Query: 184 ESLLVTGAVELLNEVSSSKVTGEEERYSHTDLYDFVANVEGAQKIYELLKPELTKKDPSL 243 L++ G+V+LLNEVS+SK+TGEEE YSHTDLYDF AN+EGAQKIYEL KP L KKD L Sbjct: 168 PKLMLQGSVDLLNEVSTSKITGEEEIYSHTDLYDFKANIEGAQKIYELFKPILNKKDKKL 227 Query: 244 AQTIGERFDALLAELAPFKSGDGYVSYETLKEDEVRKLSQNLDALAEPLSNMGTI 298 ++TI FD + L +K GDGY SYE + + + + LS ++AL EPLS M + Sbjct: 228 SETIQTDFDKVNQLLDKYKEGDGYASYEKVTKADRKALSDTVNALGEPLSKMAVV 282 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.314 0.133 0.368 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,450,577,498 Number of extensions: 55882635 Number of successful extensions: 129706 Number of sequences better than 1.0e-05: 241 Number of HSP's gapped: 129350 Number of HSP's successfully gapped: 241 Length of query: 301 Length of database: 3,060,696,203 Length adjustment: 135 Effective length of query: 166 Effective length of database: 1,788,859,178 Effective search space: 296950623548 Effective search space used: 296950623548 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 131 (55.1 bits)