BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0333.0014.p (278 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KBN9.1 B3KBN9_9BACI Acetyl-CoA carboxylase, carboxyl transfera... 471 e-131 B1DDX4.1 B1DDX4_9BACL Acetyl-CoA carboxylase, carboxyl transfera... 428 e-118 Q5KWA9.1 Q5KWA9_GEOKA Acetyl-CoA carboxylasebeta subunit EC=6.4.1.2 360 7e-98 C3IXS0.1 C3IXS0_9BACI Acetyl-CoA carboxylase, carboxyl transfera... 359 2e-97 B7YAG4.1 B7YAG4_9BACI Acetyl-CoA carboxylase, carboxyl transfera... 359 2e-97 >B3KBN9.1 B3KBN9_9BACI Acetyl-CoA carboxylase, carboxyl transferase, beta subunit Length = 297 Score = 471 bits (1211), Expect = e-131, Method: Compositional matrix adjust. Identities = 227/274 (82%), Positives = 251/274 (91%) Query: 5 GGPVEGERPKREIPEGLMSKCTKCGTIQYSKELEKNLKVCPSCGYHMRLNASERIAMTLD 64 G P EGERPKREIPEGLM+KC KCGTIQYSKELEKNLKVC CG+HMRLNA ERIAMTLD Sbjct: 24 GQPQEGERPKREIPEGLMNKCAKCGTIQYSKELEKNLKVCQECGHHMRLNAVERIAMTLD 83 Query: 65 PEGFIEFDSEMASVDPLQFPGYASKLEQQQSKTGQVEAVITGQGTIGGHPVIVAVMNFEF 124 GF EFD+EM SVDPL+FPGYA+KLEQQ+ K+G +AVITGQG+I G PV+VAVM+F+F Sbjct: 84 ETGFEEFDAEMISVDPLKFPGYAAKLEQQKMKSGLHDAVITGQGSILGQPVVVAVMSFDF 143 Query: 125 FTGSMGSVVGEKITRAVEEATEKRLPLLIFSTSGGARMQESILSLMQMAKTSAALARFGE 184 FTGSMGSVVGEKITRA+E AT+KRLPL+IFSTSGGARMQESILSLMQMAKTSAAL+RF E Sbjct: 144 FTGSMGSVVGEKITRAIEFATDKRLPLIIFSTSGGARMQESILSLMQMAKTSAALSRFNE 203 Query: 185 AGGLYISVITDPTTGGVSASFASLGDIIIAEPGAVFGFAGRIVIEQTIRQKLPEDFQTAE 244 GGLYISVITDPTTGGVSASFA+LGDI IAEPGAVFGFAGRIVIEQTIRQKLP+DFQTAE Sbjct: 204 LGGLYISVITDPTTGGVSASFATLGDINIAEPGAVFGFAGRIVIEQTIRQKLPDDFQTAE 263 Query: 245 FNLQHGQLDLVVHRKEMRATLAKLLDLHDVKGGF 278 FNL HGQLD+V+HRK+MR+ L KLL++H VKGGF Sbjct: 264 FNLAHGQLDMVIHRKDMRSMLGKLLEMHTVKGGF 297 >B1DDX4.1 B1DDX4_9BACL Acetyl-CoA carboxylase, carboxyl transferase, beta subunit Length = 290 Score = 428 bits (1101), Expect = e-118, Method: Compositional matrix adjust. Identities = 205/272 (75%), Positives = 237/272 (87%), Gaps = 1/272 (0%) Query: 8 VEGERPKREIPEGLMSKCTKCGTIQYSKELEKNLKVCPSCGYHMRLNASERIAMTLDPEG 67 + ERPKR+IPEGLM+KC+KCGTIQYSKEL+KNLKVC SCG+H RL+A ERI MTLD Sbjct: 15 IPSERPKRDIPEGLMNKCSKCGTIQYSKELDKNLKVCSSCGHHYRLSAWERIGMTLDDGR 74 Query: 68 FIEFDSEMASVDPLQFPGYASKLEQQQSKTGQV-EAVITGQGTIGGHPVIVAVMNFEFFT 126 E+D++M SVDPL+FPGY KLEQQ+ K + EAV+TG+GTI GHPV+VAVM+F+FF+ Sbjct: 75 LYEYDADMESVDPLEFPGYKGKLEQQRQKNPNLREAVVTGEGTINGHPVVVAVMSFDFFS 134 Query: 127 GSMGSVVGEKITRAVEEATEKRLPLLIFSTSGGARMQESILSLMQMAKTSAALARFGEAG 186 GSMGSVVGEKITRA+E A EK+LPLLIFSTSGGARMQESILSLMQMAKTSAAL+ F AG Sbjct: 135 GSMGSVVGEKITRAIEAAHEKKLPLLIFSTSGGARMQESILSLMQMAKTSAALSMFQGAG 194 Query: 187 GLYISVITDPTTGGVSASFASLGDIIIAEPGAVFGFAGRIVIEQTIRQKLPEDFQTAEFN 246 GL+ISV TDPT GGVSASFASLGD +AEPGA+ GFAGRIVIEQTIRQKLP++FQTAEFN Sbjct: 195 GLFISVFTDPTMGGVSASFASLGDYNLAEPGALVGFAGRIVIEQTIRQKLPDNFQTAEFN 254 Query: 247 LQHGQLDLVVHRKEMRATLAKLLDLHDVKGGF 278 +QHGQLDLVVHRK+M+ TL KLLD+H V+ G Sbjct: 255 MQHGQLDLVVHRKDMKTTLGKLLDMHTVREGL 286 >Q5KWA9.1 Q5KWA9_GEOKA Acetyl-CoA carboxylasebeta subunit EC=6.4.1.2 Length = 290 Score = 360 bits (924), Expect = 7e-98, Method: Compositional matrix adjust. Identities = 174/271 (64%), Positives = 215/271 (79%), Gaps = 1/271 (0%) Query: 7 PVEGERPKREIPEGLMSKCTKCGTIQYSKELEKNLKVCPSCGYHMRLNASERIAMTLDPE 66 P+ E+ + E+PEG+M+KC +C I Y+KEL KNL+VC SCGYH + A ERIA LD Sbjct: 14 PLPSEQARHEVPEGVMTKCPQCKKIMYTKELIKNLRVCLSCGYHHPMPARERIASLLDDG 73 Query: 67 GFIEFDSEMASVDPLQFPGYASKLEQQQSKTGQVEAVITGQGTIGGHPVIVAVMNFEFFT 126 F E+D++M SV+PL FPGY KLE+ + K+G EAV+TG+G + GHP+++AVM+ F Sbjct: 74 SFREYDADMISVNPLGFPGYIEKLEEDRRKSGLNEAVVTGEGALDGHPLVIAVMDSSFRM 133 Query: 127 GSMGSVVGEKITRAVEEATEKRLPLLIFSTSGGARMQESILSLMQMAKTSAALARFGEAG 186 GSMGSVVGEKITRAVE A E+++P LIF+ SGGARMQE +LSLMQMAKTSAAL RF G Sbjct: 134 GSMGSVVGEKITRAVERAREQQMPFLIFTASGGARMQEGVLSLMQMAKTSAALKRFSNDG 193 Query: 187 GLYISVITDPTTGGVSASFASLGDIIIAEPGAVFGFAGRIVIEQTIRQKLPEDFQTAEFN 246 GL+ISV+T PTTGGVSASFASLGD AEPGA+ GFAGR VIEQT+R++LP+DFQTAEF Sbjct: 194 GLFISVMTHPTTGGVSASFASLGDYNFAEPGALIGFAGRRVIEQTVREELPDDFQTAEFL 253 Query: 247 LQHGQLDLVVHRKEMRATLAKLLDLHDVKGG 277 L+HGQLD V+HR E++ TLA +LDLH KGG Sbjct: 254 LKHGQLDAVIHRHELKETLAVVLDLHQ-KGG 283 >C3IXS0.1 C3IXS0_9BACI Acetyl-CoA carboxylase, carboxyl transferase, beta subunit Length = 290 Score = 359 bits (921), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 173/271 (63%), Positives = 215/271 (79%), Gaps = 1/271 (0%) Query: 7 PVEGERPKREIPEGLMSKCTKCGTIQYSKELEKNLKVCPSCGYHMRLNASERIAMTLDPE 66 P+ E+ + E+PEG+M+KC +C I Y+KEL KNL+VC SCGYH + A ERIA LD Sbjct: 14 PLPSEQARHEVPEGVMTKCPQCKKIMYTKELIKNLRVCLSCGYHHPMPARERIASLLDDG 73 Query: 67 GFIEFDSEMASVDPLQFPGYASKLEQQQSKTGQVEAVITGQGTIGGHPVIVAVMNFEFFT 126 F E+D++M SV+PL FPGY KLE+ + K+G EAV+TG+G + GHP+++AVM+ F Sbjct: 74 SFREYDADMISVNPLGFPGYIEKLEEDRRKSGLNEAVVTGEGALDGHPLVIAVMDSSFRM 133 Query: 127 GSMGSVVGEKITRAVEEATEKRLPLLIFSTSGGARMQESILSLMQMAKTSAALARFGEAG 186 GSMGSVVGEKITRAVE A E+++P LIF+ SGGARMQE +LSLMQMAKTSAAL RF G Sbjct: 134 GSMGSVVGEKITRAVERAREQQMPFLIFTASGGARMQEGVLSLMQMAKTSAALKRFSNDG 193 Query: 187 GLYISVITDPTTGGVSASFASLGDIIIAEPGAVFGFAGRIVIEQTIRQKLPEDFQTAEFN 246 GL+ISV+T PTTGGVSASFASLGD AEPGA+ GFAGR VIEQT+R++LP+DFQTAEF Sbjct: 194 GLFISVMTHPTTGGVSASFASLGDYNFAEPGALIGFAGRRVIEQTVREELPDDFQTAEFL 253 Query: 247 LQHGQLDLVVHRKEMRATLAKLLDLHDVKGG 277 L+HGQLD V+HR E++ TLA +LD+H KGG Sbjct: 254 LKHGQLDAVIHRHELKETLAVVLDIHQ-KGG 283 >B7YAG4.1 B7YAG4_9BACI Acetyl-CoA carboxylase, carboxyl transferase, beta subunit Length = 290 Score = 359 bits (921), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 173/271 (63%), Positives = 215/271 (79%), Gaps = 1/271 (0%) Query: 7 PVEGERPKREIPEGLMSKCTKCGTIQYSKELEKNLKVCPSCGYHMRLNASERIAMTLDPE 66 P+ E+ + E+PEG+M+KC +C I Y+KEL KNL+VC SCGYH + A ERIA LD Sbjct: 14 PLPSEQARHEVPEGVMTKCPQCKKIMYTKELIKNLRVCLSCGYHHPMPARERIASLLDDG 73 Query: 67 GFIEFDSEMASVDPLQFPGYASKLEQQQSKTGQVEAVITGQGTIGGHPVIVAVMNFEFFT 126 F E+D++M SV+PL FPGY KLE+ + K+G EAV+TG+G + GHP+++AVM+ F Sbjct: 74 SFREYDADMISVNPLGFPGYIEKLEEDRRKSGLNEAVVTGEGALDGHPLVIAVMDSSFRM 133 Query: 127 GSMGSVVGEKITRAVEEATEKRLPLLIFSTSGGARMQESILSLMQMAKTSAALARFGEAG 186 GSMGSVVGEKITRAVE A E+++P LIF+ SGGARMQE +LSLMQMAKTSAAL RF G Sbjct: 134 GSMGSVVGEKITRAVERAREQQMPFLIFTASGGARMQEGVLSLMQMAKTSAALKRFSNDG 193 Query: 187 GLYISVITDPTTGGVSASFASLGDIIIAEPGAVFGFAGRIVIEQTIRQKLPEDFQTAEFN 246 GL+ISV+T PTTGGVSASFASLGD AEPGA+ GFAGR VIEQT+R++LP+DFQTAEF Sbjct: 194 GLFISVMTHPTTGGVSASFASLGDYNFAEPGALIGFAGRRVIEQTVREELPDDFQTAEFL 253 Query: 247 LQHGQLDLVVHRKEMRATLAKLLDLHDVKGG 277 L+HGQLD V+HR E++ TLA +LD+H KGG Sbjct: 254 LKHGQLDAVIHRHELKETLAVVLDIHQ-KGG 283 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.135 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,593,848,947 Number of extensions: 61370360 Number of successful extensions: 180919 Number of sequences better than 1.0e-05: 3542 Number of HSP's gapped: 177765 Number of HSP's successfully gapped: 3543 Length of query: 278 Length of database: 3,060,696,203 Length adjustment: 134 Effective length of query: 144 Effective length of database: 1,798,280,193 Effective search space: 258952347792 Effective search space used: 258952347792 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 130 (54.7 bits)