BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0333.0013.p (325 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KBP0.1 B3KBP0_9BACI Acetyl-CoA carboxylase, carboxyl transfera... 504 e-141 B1DDX3.1 B1DDX3_9BACL Acetyl-CoA carboxylase, carboxyl transfera... 419 e-115 B7GGT0.1 ACCA_ANOFW Acetyl-coenzyme A carboxylase carboxyl trans... 375 e-102 C2C1M5.1 C2C1M5_LISGR Acetyl-CoA carboxylase carboxyltransferase... 365 2e-99 C5D664.1 C5D664_9BACI Acetyl-CoA carboxylase, carboxyl transfera... 365 3e-99 >B3KBP0.1 B3KBP0_9BACI Acetyl-CoA carboxylase, carboxyl transferase, alpha subunit EC=2.7.7.25 Length = 327 Score = 504 bits (1299), Expect = e-141, Method: Compositional matrix adjust. Identities = 244/307 (79%), Positives = 268/307 (87%) Query: 1 MPLLEMRKKIAELKQFGEEKGIDFSDETARLEERYRVMEDEIYSNISPSQKMHLARHHGR 60 MPL EMRKKI ELKQFG+EKGIDF+DE ARLEERY +E+EIYS+ISPSQKMHLARH R Sbjct: 9 MPLAEMRKKIDELKQFGQEKGIDFTDEIARLEERYSRLEEEIYSSISPSQKMHLARHQQR 68 Query: 61 PTSLDLISLMFTDFIELHGDRHFGDDLAVVGGIAKLNGAPVTVIGQQRGKDTKENILRFF 120 PTSLDLI L+FTDFIELHGDR +GDDLA+VGG+AKL+G PVTV+GQQRGKDTK+NI RFF Sbjct: 69 PTSLDLIQLIFTDFIELHGDRLYGDDLAIVGGLAKLDGVPVTVVGQQRGKDTKDNIARFF 128 Query: 121 GSAHPEGFRKALRLMKQAEKFGRPIVTFVDTKGAYPGNTAEERGQSEAIARNLYEMSQLA 180 GS HPEGFRKALRLM+QA KF RPI+TF+DTKGAYPGNTAEERGQSEAIARNL EMS L Sbjct: 129 GSPHPEGFRKALRLMQQANKFKRPIITFIDTKGAYPGNTAEERGQSEAIARNLREMSSLG 188 Query: 181 VPVVCVIIGEGGSGGALAMAVGNRVLMLEHAIYSAISPNGAASILWKDASKAEQAAEAMK 240 VPVVCV+IGEGGSGGALAMAVGNRVLMLEHAIYSAISPNGAASILWKDASKA+QAAEAMK Sbjct: 189 VPVVCVVIGEGGSGGALAMAVGNRVLMLEHAIYSAISPNGAASILWKDASKADQAAEAMK 248 Query: 241 ITAADXXXXXXXXXXXXXXRGGAHRDYEETAAAIKDAVWRHLQELSGLDSAELKEDRYRK 300 ITA D +GGAHR+YEETAAAI+ A+ L+ELS +D+ ELKEDRYRK Sbjct: 249 ITAKDLLEMEVIEEIIPEPKGGAHRNYEETAAAIRSALISQLKELSVMDACELKEDRYRK 308 Query: 301 FRKIGVF 307 FRKIG F Sbjct: 309 FRKIGEF 315 >B1DDX3.1 B1DDX3_9BACL Acetyl-CoA carboxylase, carboxyl transferase, alpha subunit EC=2.7.7.25 Length = 345 Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust. Identities = 210/306 (68%), Positives = 246/306 (80%) Query: 2 PLLEMRKKIAELKQFGEEKGIDFSDETARLEERYRVMEDEIYSNISPSQKMHLARHHGRP 61 P+ ++R+KIA LK E G+DFS+E ARLEE+ + ME+E+Y+ ++P+QKMH+AR H RP Sbjct: 12 PISDLREKIATLKTLAESNGMDFSEEIARLEEKCKQMEEELYNEMTPAQKMHIARLHQRP 71 Query: 62 TSLDLISLMFTDFIELHGDRHFGDDLAVVGGIAKLNGAPVTVIGQQRGKDTKENILRFFG 121 TSLD I +FTDFIELHGDR F DDLA+VGG+AKLNG PVTVIG QRGKDTK+NI RFFG Sbjct: 72 TSLDFIQAVFTDFIELHGDRLFADDLAIVGGLAKLNGLPVTVIGHQRGKDTKDNIARFFG 131 Query: 122 SAHPEGFRKALRLMKQAEKFGRPIVTFVDTKGAYPGNTAEERGQSEAIARNLYEMSQLAV 181 S HPEGFRKALRLM+QA KF RPI+T +DTKGAYPGNTAEERGQSEAIARNL EM+ AV Sbjct: 132 SPHPEGFRKALRLMQQANKFKRPIITLIDTKGAYPGNTAEERGQSEAIARNLREMAGFAV 191 Query: 182 PVVCVIIGEGGSGGALAMAVGNRVLMLEHAIYSAISPNGAASILWKDASKAEQAAEAMKI 241 P+VC++IGEGGSGGALA+ VGNRVLMLE+AIYSAISPNGAASILWKDASKA+ AAEAMKI Sbjct: 192 PIVCIVIGEGGSGGALALGVGNRVLMLENAIYSAISPNGAASILWKDASKADIAAEAMKI 251 Query: 242 TAADXXXXXXXXXXXXXXRGGAHRDYEETAAAIKDAVWRHLQELSGLDSAELKEDRYRKF 301 TA D +GGAHRD TA +K+ +W+HL EL + +L EDRY KF Sbjct: 252 TAKDLLEFEVIEDIIEEPQGGAHRDLAFTAERLKEKLWKHLVELLPMTPEQLIEDRYHKF 311 Query: 302 RKIGVF 307 RKIG F Sbjct: 312 RKIGEF 317 >B7GGT0.1 ACCA_ANOFW Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha EC=6.4.1.2 Length = 325 Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust. Identities = 192/306 (62%), Positives = 233/306 (76%) Query: 2 PLLEMRKKIAELKQFGEEKGIDFSDETARLEERYRVMEDEIYSNISPSQKMHLARHHGRP 61 PL+E+RKKI+ELK+F + + +DFSDE +LE R +E++IY+N+SP ++ +ARH RP Sbjct: 10 PLVELRKKISELKEFTKHRDVDFSDEINKLEARLEKLENDIYANLSPWDRVQIARHPNRP 69 Query: 62 TSLDLISLMFTDFIELHGDRHFGDDLAVVGGIAKLNGAPVTVIGQQRGKDTKENILRFFG 121 T+LD I +FT+F E HGDR FGDD A+VGGIAK +G PVTVIG QRGKDTKENI R FG Sbjct: 70 TTLDYIERLFTNFFECHGDRCFGDDEAIVGGIAKYHGLPVTVIGHQRGKDTKENIRRNFG 129 Query: 122 SAHPEGFRKALRLMKQAEKFGRPIVTFVDTKGAYPGNTAEERGQSEAIARNLYEMSQLAV 181 HPEG+RKALRLMKQAEKFGRPI+ F+DTKGAYPG AEERGQSEAIARNL+EM+ L V Sbjct: 130 MPHPEGYRKALRLMKQAEKFGRPIICFIDTKGAYPGKAAEERGQSEAIARNLFEMAGLTV 189 Query: 182 PVVCVIIGEGGSGGALAMAVGNRVLMLEHAIYSAISPNGAASILWKDASKAEQAAEAMKI 241 PVVCV+IGEGGSGGALA+ VGN V MLE++ YS ISP GAA+ILWKDAS A++AAE MKI Sbjct: 190 PVVCVVIGEGGSGGALALGVGNYVHMLENSTYSVISPEGAAAILWKDASLAKKAAETMKI 249 Query: 242 TAADXXXXXXXXXXXXXXRGGAHRDYEETAAAIKDAVWRHLQELSGLDSAELKEDRYRKF 301 TA D RGGAHR+ +E A I D + R L+EL L + +L RY K+ Sbjct: 250 TAKDLKQLGVIDEIIPEVRGGAHRNVDEQAKYIDDVLKRSLRELLPLHAEQLIAQRYEKY 309 Query: 302 RKIGVF 307 +KIG F Sbjct: 310 KKIGDF 315 >C2C1M5.1 C2C1M5_LISGR Acetyl-CoA carboxylase carboxyltransferase subunit alpha EC=6.4.1.2 Length = 318 Score = 365 bits (938), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 180/306 (58%), Positives = 230/306 (75%) Query: 2 PLLEMRKKIAELKQFGEEKGIDFSDETARLEERYRVMEDEIYSNISPSQKMHLARHHGRP 61 P+LE+++KI +LK++ E +D + E +LE+R +E +IY N++ K +ARH RP Sbjct: 10 PILELKEKITDLKEYNENAEVDLTREIEKLEKRLAKLETDIYDNMTAWDKFQVARHPERP 69 Query: 62 TSLDLISLMFTDFIELHGDRHFGDDLAVVGGIAKLNGAPVTVIGQQRGKDTKENILRFFG 121 T+LD I +F +F+ELHGDR +GDD A+VGGIA G PVTVIG QRGKDTK+N++R FG Sbjct: 70 TTLDYIPYLFDNFMELHGDRAYGDDAAIVGGIATFKGTPVTVIGHQRGKDTKDNLVRNFG 129 Query: 122 SAHPEGFRKALRLMKQAEKFGRPIVTFVDTKGAYPGNTAEERGQSEAIARNLYEMSQLAV 181 HPEGFRKALRLMKQA+KFGRPI+ F+DTKGAYPG AEERGQSEAIARNLYEMS + V Sbjct: 130 MPHPEGFRKALRLMKQADKFGRPIICFIDTKGAYPGRAAEERGQSEAIARNLYEMSDMKV 189 Query: 182 PVVCVIIGEGGSGGALAMAVGNRVLMLEHAIYSAISPNGAASILWKDASKAEQAAEAMKI 241 P++ ++IGEGGSGGALA+ VGN++ MLE+A++S ISP GAA+ILWKDASKA++AAE+MKI Sbjct: 190 PIISIVIGEGGSGGALALGVGNQIFMLENAVFSVISPEGAAAILWKDASKAQKAAESMKI 249 Query: 242 TAADXXXXXXXXXXXXXXRGGAHRDYEETAAAIKDAVWRHLQELSGLDSAELKEDRYRKF 301 TA D +GGAHRD EE A AIK + + L L+ L +L E RY KF Sbjct: 250 TADDLYELQITDGIIPEVKGGAHRDLEEQAKAIKKTLSKALHTLTALSEEQLVEQRYNKF 309 Query: 302 RKIGVF 307 +KIGV+ Sbjct: 310 KKIGVY 315 >C5D664.1 C5D664_9BACI Acetyl-CoA carboxylase, carboxyl transferase, alpha subunit EC=2.7.7.25 Length = 325 Score = 365 bits (938), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 185/306 (60%), Positives = 229/306 (74%) Query: 2 PLLEMRKKIAELKQFGEEKGIDFSDETARLEERYRVMEDEIYSNISPSQKMHLARHHGRP 61 PL+E+RKKI+ELK+F + +D S E +LE R +E++IY+N++P ++ +ARH RP Sbjct: 10 PLIELRKKISELKEFMKSTDVDLSSEIEKLEARLAKLENDIYANLTPWDRVQIARHPNRP 69 Query: 62 TSLDLISLMFTDFIELHGDRHFGDDLAVVGGIAKLNGAPVTVIGQQRGKDTKENILRFFG 121 T+LD I +FT F+E HGDR FGDD A+VGGIAK +G PVTVIG QRGKDTKENI R FG Sbjct: 70 TTLDYIERLFTHFLECHGDRCFGDDEAIVGGIAKYDGLPVTVIGHQRGKDTKENIRRNFG 129 Query: 122 SAHPEGFRKALRLMKQAEKFGRPIVTFVDTKGAYPGNTAEERGQSEAIARNLYEMSQLAV 181 HPEG+RKALRLMKQAEKF RPI+ F+DTKGAYPG AEERGQSEAIARNL+EM+ L V Sbjct: 130 MPHPEGYRKALRLMKQAEKFQRPIICFIDTKGAYPGKAAEERGQSEAIARNLFEMAGLTV 189 Query: 182 PVVCVIIGEGGSGGALAMAVGNRVLMLEHAIYSAISPNGAASILWKDASKAEQAAEAMKI 241 P+VC++IGEGGSGGALA+ VGN + MLE++ YS ISP GAA+ILWKDAS A++AAE MKI Sbjct: 190 PIVCIVIGEGGSGGALALGVGNHIHMLENSTYSVISPEGAAAILWKDASLAQRAAETMKI 249 Query: 242 TAADXXXXXXXXXXXXXXRGGAHRDYEETAAAIKDAVWRHLQELSGLDSAELKEDRYRKF 301 TA D RGGAHRD ++ AA I + R L++L LD L + RY KF Sbjct: 250 TANDLKELGVIDEIIPEVRGGAHRDVDQQAAEIDKVLKRSLKQLLKLDGETLVQQRYEKF 309 Query: 302 RKIGVF 307 ++IG F Sbjct: 310 KQIGQF 315 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.135 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,761,349,075 Number of extensions: 72068123 Number of successful extensions: 214312 Number of sequences better than 1.0e-05: 1438 Number of HSP's gapped: 213569 Number of HSP's successfully gapped: 1438 Length of query: 325 Length of database: 3,060,696,203 Length adjustment: 136 Effective length of query: 189 Effective length of database: 1,779,438,163 Effective search space: 336313812807 Effective search space used: 336313812807 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 131 (55.1 bits)