BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0327.0021.p
         (909 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3K7H3.1 B3K7H3_9BACI Copper amine oxidase domain protein            1078   0.0  
B1DEC2.1 B1DEC2_9BACL Copper amine oxidase domain protein             761   0.0  
C0Z816.1 C0Z816_BREBN Putative uncharacterized protein                299   9e-79
A5D3T7.1 A5D3T7_PELTS Hypothetical membrane protein                   275   2e-71
C1TEJ0.1 C1TEJ0_9FIRM Putative S-layer protein                        238   2e-60

>B3K7H3.1 B3K7H3_9BACI Copper amine oxidase domain protein
          Length = 900

 Score = 1078 bits (2788), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 530/888 (59%), Positives = 654/888 (73%), Gaps = 5/888 (0%)

Query: 23  KKWIAASLAGVLWIMPVLGSEGLPQWASGPTSVAQAASSLNVTKLGEEVITSGAIMMKYK 82
           KKW+  +LAGV+W+ PVL S G+P   +  TS    A++ +  KL EE+ITSGA++MKY+
Sbjct: 17  KKWLIITLAGVIWVGPVL-SSGIPVIGNLSTSSVAYAATTSAKKLDEEIITSGAVLMKYQ 75

Query: 83  FTTVRSGKKATGLADVIRVDLNNPYVSLDVMTGKGGKLTTRQSTGGMAAETGAVAAVNGD 142
           +      K    LA+VIRVDLNN YV LDVMTG+G + TTRQSTGGMA E GAVAA+NGD
Sbjct: 76  YINSAGAKS---LANVIRVDLNNKYVKLDVMTGQGNQFTTRQSTGGMAKENGAVAAINGD 132

Query: 143 YFNTGGEGAPIXXXXXXXXXXXTPSQLNGMYAFAVTKDRKPVIDQYSFEGLLTAEDGAQF 202
           +FNTG EGAP+           +PS L GMYAFAVT D KP++D+++F G +TAE+G  F
Sbjct: 133 FFNTGREGAPMGAQVSNGLMMSSPSDLKGMYAFAVTNDGKPILDEFAFSGSITAENGTTF 192

Query: 203 PLAGINKGAYSPEDGSSTYSHANTAYIYTDAWTALERPKNSSTTPTEVLVENDIITQISA 262
           PLAG+NK AY+PE   S YSH N AYIYT AW ALERPKNSS+TPTEV+V + +IT IS 
Sbjct: 193 PLAGMNKTAYTPEGTGSNYSHVNAAYIYTSAWKALERPKNSSSTPTEVMVTDGVITDISV 252

Query: 263 DKALSMAVPKGAYILRTHGLGAQFVKNHLAVGQKLSSVYTLKSKSTQQELDPASLQMMIG 322
              +  AVP+G+YILRTHG  A+FVKN+LAVGQ+L + Y L SK T Q+LDP +LQMMIG
Sbjct: 253 MAGIPTAVPEGSYILRTHGAAAEFVKNNLAVGQRLEADYALVSKKTGQKLDPTNLQMMIG 312

Query: 323 GHTILVNDGKATSFSRSTSSIGGFRARTALGYSQSGQYVYVVAVEDNANSAGMSLTELQN 382
           GHTILV++GKATSFSR+ + +GG RARTA+GYS+ G+Y Y++A E N NS GM+L +LQ+
Sbjct: 313 GHTILVDNGKATSFSRNVNDLGGNRARTAVGYSKDGRYAYLIATESNDNSKGMTLQQLQD 372

Query: 383 FMANIGVWKGMNLDGGGSTTMVDRPLAETSATLTFNTEYGTEQRSIVNGLGVYTSAPKGE 442
           FM  +GVWKGMNLDGGGSTTMV+RPLAE +  LTFNTEYGT QRSIVN LGV+++AP+G 
Sbjct: 373 FMTKVGVWKGMNLDGGGSTTMVNRPLAEMNTQLTFNTEYGTTQRSIVNALGVFSTAPQGS 432

Query: 443 VKGIKISGSTVLLIGQKATYSLKGYDTYYNPIDVAAGNPSWTASNGSVTVNGGEATAVXX 502
           +KG+K+SGS  LLIGQ  TY LKGYDTYYNPI+  +  P+W +SNG++ VNG    A   
Sbjct: 433 LKGLKVSGSNTLLIGQIGTYELKGYDTYYNPIEAGSIKPTWKSSNGNLAVNGQSIKATKP 492

Query: 503 XXXXXXXXXXXXXXXXEVTVLGGENLSSLTVGTATAPLTPGASVSVPVTALAENGASLTV 562
                           +V VLG ++L +LT G ++APL  G SVSVPVTA+  +G SL V
Sbjct: 493 GTSTLTAVSGSTKATMQVKVLGADDLVALTTGVSSAPLQAGTSVSVPVTAVTSSGQSLEV 552

Query: 563 PPASLKWELVGFKGSVQDGKLTVDSVDPGVTTGYAIARYDGFXXXXXXXXXXXXPWENFE 622
           P ++LKWE +GFKGSV+DG+LTV SV+     GYAIARYDGF             WENFE
Sbjct: 553 PSSALKWEFIGFKGSVKDGRLTVSSVNSNTKVGYAIARYDGFSTVVILSAAGESTWENFE 612

Query: 623 NVSYPIAFXXXXXXXXXXXXXXXXXXEKAGSKVLSLSYDMTAGSG-KMYAYAQLNGTSGK 681
           NV+YP+ F                   KA SKVL+L+YDMT G G KMYAYA+LNGT+GK
Sbjct: 613 NVNYPVKFTTNVPAVTGTAAIQNGSGTKATSKVLNLTYDMTGGLGQKMYAYAELNGTTGK 672

Query: 682 NIPAAATSMSLDVMGDMSLNWLRAEVVDGSGKISYIDLAKVIDWNGWKSLNIDLSGSGIK 741
            IPA ATSM++DV GD SLNWLRAE+ D +GK  Y+DLAK IDW+GWK+L+IDLSG  I 
Sbjct: 673 TIPAQATSMTIDVEGDNSLNWLRAELKDNNGKTVYVDLAKAIDWSGWKTLSIDLSGYNIA 732

Query: 742 FPAALKRLYVVNVEEGQDERAKTGTVAFDNISFVMPSLSSEAGLPKGTAAMSIGSKSITV 801
           FPA +KRLYVVNVEE QDERA TG V+FD+I F MPSLS   GLP G A M+IG KS+ +
Sbjct: 733 FPAQMKRLYVVNVEESQDERALTGAVSFDDIRFTMPSLSGNEGLPTGKAVMTIGQKSLML 792

Query: 802 NGAKKAIDVAPIVKDASTYVPIKVVLDAFGGSAAWDKNTKKIMVLRGAKALDLTVNKKEF 861
           NG+K AID API+K+ +TYVPIK VLDAFGG A W+++ +++ VLRG   ++LTV KKEF
Sbjct: 793 NGSKVAIDSAPILKNGTTYVPIKHVLDAFGGQATWNQSAQRVGVLRGGMLMELTVGKKEF 852

Query: 862 VLNGKRQTAEVAPLILQGRTLVPLRLVSEQLGLTVKWEQKTKTVTIES 909
           +LNGKR +A VAP++  GRTLVPLRLVSEQLGL VKW++ TKTVTIES
Sbjct: 853 ILNGKRSSAAVAPMVQGGRTLVPLRLVSEQLGLKVKWDKNTKTVTIES 900


>B1DEC2.1 B1DEC2_9BACL Copper amine oxidase domain protein
          Length = 904

 Score =  761 bits (1966), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/846 (46%), Positives = 524/846 (61%), Gaps = 6/846 (0%)

Query: 67  LGEEVITSGAIMMKYKFTTVRSGKKATGLADVIRVDLNNPYVSLDVMTGKGGKLTTRQST 126
           L +  IT+GA  M Y +TT RSGK A     VI+VDL NPYV+L+ M+GK   +    + 
Sbjct: 61  LQQSYITAGAQRMDYLWTTTRSGKAAKANIHVIQVDLTNPYVNLNTMSGKNDTVGKLNTV 120

Query: 127 GGMAAETGAVAAVNGDYFNTGGEGAPIXXXXXXXXXXXTPSQLNGMYAFAVTKDRKPVID 186
             M  E GAVA +N D F T  EG+P+           +P Q+ GMYAFAVTKDRKPVID
Sbjct: 121 MNMTKENGAVAGINADVFITTTEGSPMGAQVTSGTLMTSPMQIKGMYAFAVTKDRKPVID 180

Query: 187 QYSFEGLLTAEDGAQFPLAGINKGAYSPEDGSSTYSHANTAYIYTDAWTALERPKNSSTT 246
            Y+F+G +T+ DG+ F LAG+N+ AY PE GSS YSH N  +IY  AW   ERPKNSSTT
Sbjct: 181 SYTFDGKVTSADGSSFTLAGLNQSAYIPEGGSSNYSHLNALFIYNSAWGGAERPKNSSTT 240

Query: 247 PTEVLVENDIITQISADKALSMAVPKGAYILRTHGLGAQFVKNHLAVGQKLSSVYTLKSK 306
           PTE LV N ++ QIS  K L+  +P   YILR HG  AQF+  HL VGQ ++S Y+L S 
Sbjct: 241 PTEALVVNGVVQQISDGKPLTGTIPADGYILRGHGTAAQFILEHLQVGQSVTSDYSLVSA 300

Query: 307 STQQELDPASLQMMIGGHTILVNDGKATSFSRSTSSIGG--FRARTALGYSQSGQYVYVV 364
           ++ Q++DP S +M++GGHTILVN+G A +FSR  + + G  + +RTA+GYS+ G  VY++
Sbjct: 301 TSGQKVDPTSFEMLVGGHTILVNNGAAATFSRDITGVSGSSYVSRTAVGYSKDGTKVYLI 360

Query: 365 AVEDNANSAGMSLTELQNFMANIGVWKGMNLDGGGSTTMVDRPLAETSATLTFNTEYGTE 424
             ED  +S G++L ELQ  M  +GV+KG+NLDGGGSTTM++RPL ETS  L  +T+Y T 
Sbjct: 361 TSEDYGDSTGLNLKELQQVMVKLGVYKGINLDGGGSTTMIERPLGETSLRLAHSTQYDTT 420

Query: 425 QRSIVNGLGVYTSAPKGEVKGIKISGSTVLLIGQKATYSLKGYDTYYNPIDVAAGNPSWT 484
           QRSI N +GV+T+AP+G +KGI ISGS VL +GQK T+S+KGYDTYYNP  V   N SW+
Sbjct: 421 QRSISNSIGVFTTAPQGNLKGIAISGSNVLFVGQKTTFSVKGYDTYYNPTTVDGTNASWS 480

Query: 485 ASNGSVTVNGGEATAVXXXXXXXXXXXXXXXXXXEVTVLGGENLSSLTVGTATAPLTPGA 544
           ++ G  + +G   TA                    V V+G + ++ L + TA   L+ GA
Sbjct: 481 SATGVGSFSGNTFTASKPGSTNITVKSGSVTATYPVEVIGKDQIAELKLDTAAGVLSKGA 540

Query: 545 SVSVPVTALAENGASLTVPPASLKWELVGFKGSVQDGKLTVDSVDPGVTTGYAIARYDGF 604
           +VS+PV    +NG +  +   SL+WE  GF  +     LTV+SV+ G TTGYAI RYDG+
Sbjct: 541 TVSIPVKVTLKNGKTYKLTGDSLQWEFTGFTATTSGDTLTVNSVNSGTTTGYAIGRYDGY 600

Query: 605 XXXX-XXXXXXXXPWENFENVSYPIAFXXXXXXXXXXXXXXXXXXE-KAGSKVLSLSYDM 662
                          E FENV+Y I                      +   K L +SYD 
Sbjct: 601 ATMLPFTQGGSEKTLETFENVAYGINPQVTPAATTTGSVKLVTDLPGQTSGKALQISYDF 660

Query: 663 TAGSGKMYAYAQLNGTSGKNIPAAATSMSLDVMGDMSLNWLRAEVVDGSGKISYIDLAKV 722
           +AG+G    YAQ NGTSGK+I  +  SM++DV GD SLNWLRAE VD +G +  +DLAK 
Sbjct: 661 SAGTGTKAVYAQFNGTSGKSIDGSPVSMTMDVYGDKSLNWLRAEFVDANGTVHLVDLAKQ 720

Query: 723 IDWNGWKSLNIDLSGSGIKFPAALKRLYVVNVEEGQDERAKTGTVAFDNISFVMPSLSSE 782
           +DW+GWKS+  DLS  G+ +P  LKR+YVV   +GQDERA TG V  DNI   +   SS 
Sbjct: 721 LDWSGWKSVKADLSAKGMAYPVKLKRVYVVTTPDGQDERAATGAVGIDNIK--LQYASST 778

Query: 783 AGLPKGTAAMSIGSKSITVNGAKKAIDVAPIVKDASTYVPIKVVLDAFGGSAAWDKNTKK 842
               KG   M+IG KS   NG   A++VAP     +TYVPI+ V DA G +  WD    +
Sbjct: 779 TTPTKGHIEMTIGKKSAVSNGKTIAMEVAPFETGGTTYVPIRFVTDAMGVTLKWDNKLNR 838

Query: 843 IMVLRGAKALDLTVNKKEFVLNGKRQTAEVAPLILQGRTLVPLRLVSEQLGLTVKWEQKT 902
           + VL G+K L++ + KKE  +NG     EVAP+I  GRTL+P+RLVSE+LGL V ++ KT
Sbjct: 839 VTVLNGSKMLEMVIGKKEININGALSQTEVAPMIKNGRTLIPIRLVSEKLGLKVTYDNKT 898

Query: 903 KTVTIE 908
           K + I+
Sbjct: 899 KKIAID 904


>C0Z816.1 C0Z816_BREBN Putative uncharacterized protein
          Length = 1054

 Score =  299 bits (766), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 231/764 (30%), Positives = 364/764 (47%), Gaps = 50/764 (6%)

Query: 53  TSVAQA---ASSLNVTKLGEEVITSGAIMMKYKFTTVRSGKKATGLADVIRVDLNNPYVS 109
           T+VA A    S+LN+  + +  I  G  + KY     +S         V +VDLNNPYV 
Sbjct: 28  TNVAHARAETSALNM--MWQTPIGEGTTLQKY----TKSFANQVVTIMVTKVDLNNPYVE 81

Query: 110 LDVMTGKGGKLTTRQSTGGMAAETGAVAAVNGDYFNTGGEGAPIXXXXXXXXXXXTPSQL 169
           +  + G  GKLT +Q+   MA ETGA+AA+N D+F+    GAP            +   +
Sbjct: 82  VKPVYGTKGKLTDKQTVTQMARETGAIAAINADFFHMTKRGAPFGIVMKDDELISSMGLV 141

Query: 170 NGMYAFAVTKDRKPVIDQYSFEGLLTAEDGAQFPLAGINKGAYSPEDGSSTYSHANTAYI 229
           +  YA  +T D+  ++D++ F G +TA +GA + + G+NK  Y+P DG    SH N   +
Sbjct: 142 SYWYALGLTGDKMAIVDKFGFGGKVTAPNGATYSIQGVNKEEYNPSDGRK--SHQNQLNV 199

Query: 230 YTDAW--TALERPKNSSTTP-----TEVLVENDIITQISADKALSMAVPKGAYILRTHGL 282
           YT ++  T+L       T P      E+L  +++  ++  ++   + +P   Y+L  HG 
Sbjct: 200 YTPSFGKTSL------GTIPGYKDVVEILFVDNVAKEVRVNQP-GVYIPYNGYVLWGHGA 252

Query: 283 GAQFVKNHLAVGQKLSSVYTLKSKSTQQELDPASLQMMIGGHTILVNDGKATSFSRSTSS 342
              F+K +  VG   +  Y    ++T Q L+   L+  +GG+ ILV+ GKA +  ++  S
Sbjct: 253 AGAFLKQNFPVGATAAVEY----QTTPQTLN---LKQAVGGNVILVDQGKALTSFQADKS 305

Query: 343 IGGFRARTALGYSQSGQYVYVVAVEDNANSAGMSLTELQNFMANIGVWKGMNLDGGGSTT 402
           I    ART++G SQ G+ +Y+V ++    S G+ L EL   MA +G ++ +N DGGGSTT
Sbjct: 306 ITSKTARTSVGVSQDGKTLYMVTIDA---SQGVYLDELAKIMAELGSYRAVNFDGGGSTT 362

Query: 403 MVDRPLAETSATLTFNTEYGTEQRSIVNGLGVYTSAPKGEVKGIKISGSTVLLIGQKATY 462
           M  R L ET A L  N   G  +R +  GL VY +AP GE++G +I     +LIGQ    
Sbjct: 363 MATRMLGETHANLA-NKPSGGAERRVPTGLAVYNTAPAGELRGFQIDVPADVLIGQSIPL 421

Query: 463 SL-KGYDTYYNPIDVAAGNPSWTASNGSV-TVNGGEATAVXXXXXXXXXXXXXXXXXXEV 520
           S  KGYD ++ P  + AG+ SW AS     +VNG   T                    ++
Sbjct: 422 SASKGYDVHFQPYAINAGDVSWDASQSEAGSVNGKHFTPARSGKITLTARLGNVTQNKDI 481

Query: 521 TVLGGENLSSLTVGTATAPLTPGASVSVPVTALAENGASLTVPPASLKWELVGFKGSVQD 580
            V+ G ++  + V      + PG S+++ V    + G+++   P S+K  +     ++ D
Sbjct: 482 QVISGIDVQQIIVSPNPITIAPGQSITLDVKIKTKKGSTVQATPLSVKASVDSSVATIND 541

Query: 581 GKLTVDSVDPGVTTGYAIARYDGFXXXXXXXX-XXXXPWENFENVS--YPIAFXXXXXXX 637
               V   +PG   G     YDG              PW  F+N +  Y  A        
Sbjct: 542 NLQLVAGNEPG--NGNLTITYDGVATTVPFAVGQFEQPWLTFDNQAGMYHAANPSSISSA 599

Query: 638 XXXXXXXXXXXEKAGSKVLSLSYDMTAGSGKMYAYAQLNGTSGKNIPAAATSMSLDVMGD 697
                          +  L  ++     +    +Y  L G +   IP     + L V GD
Sbjct: 600 GSFALVSDQTFRTKKAAKLVYNFSGAPANNMRISYGML-GANPVTIPGKPLGLGLWVNGD 658

Query: 698 MSLNWLRAEVVDGSGKISYIDLAKVIDWNGWKSLNIDLSGSGIKFPAALKRLYVVNVEEG 757
            S +WLRAE +D +GK  Y+DLAK I+W GWK +      S + +P  LK +YVV+    
Sbjct: 659 NSGHWLRAEAIDANGKSVYVDLAKEINWTGWKQVK-GYFPSNVAYPLHLKSVYVVDQAND 717

Query: 758 QDERAKTGTVAFDNISFVMPSLSSE----AGLPKGTAAMSIGSK 797
                K GT+ FD  S ++ + + +    A +P+   +MS+G++
Sbjct: 718 GITHDK-GTLYFDEFSLLLGNKTGQPSDVAVVPELPGSMSLGAE 760


>A5D3T7.1 A5D3T7_PELTS Hypothetical membrane protein
          Length = 887

 Score =  275 bits (702), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 180/559 (32%), Positives = 287/559 (51%), Gaps = 36/559 (6%)

Query: 33  VLWIMPVLGSEGLPQWASGPTSVAQAASSLNVTKLGEEVITSGAIMMKYKFTTVRSGKKA 92
           VL+ + +L    LP WA     V++  S        EE +T GA++   + TT       
Sbjct: 18  VLFFICLL----LPSWALAYQVVSKTVS--------EETVTRGAVLQTVRMTTNEGPLNV 65

Query: 93  TGLADVIRVDLNNPYVSLDVMTGKGGKLTTRQSTGGMAAETGAVAAVNGDYFNTGGEGAP 152
                +++ DL++PY+ +D + G  G L   Q+   MA   GAVAAVNGD+F     G P
Sbjct: 66  Y----ILKADLSDPYLKVDTIVGADGTLAKNQTVTAMAGRAGAVAAVNGDFFQMKESGRP 121

Query: 153 IXXXXXXXXXXXTPSQLNGMYAFAVTKDRKPVIDQYSFEGLLTAEDGAQFPLAGINKGAY 212
           I           +P+  + MY FAVTKD+ P+++ + F G +TA +G  FPL+GINK  Y
Sbjct: 122 IGLLYQGGRLIESPALRSDMYGFAVTKDKLPILEVFQFSGQVTAGNGKSFPLSGINKPGY 181

Query: 213 SPEDGSSTYSHANTAYIYTDAWTALERPKNSSTT-PTEVLVENDIITQISADKALSMAVP 271
                +S  S  ++  +Y   W  + R + +  T   E +V+N ++ Q+  D+   + +P
Sbjct: 182 LVMSDAS--SDVDSLLLYNSLWGPVSRGRLAGLTGVVEAVVKNGVVQQVLTDQP-GVPIP 238

Query: 272 KGAYILRTHGLGAQFVKNHLAVGQKLSSVYTLKSKSTQQELDPASLQMMIGGHTILVNDG 331
              Y+LR HG  A+F+  +L  G K+S  Y++  +  +       L   +GG  +LV +G
Sbjct: 239 PDGYVLRGHGQAARFILENLPAGSKVSYTYSVMPQGDK-------LFAAVGGQALLVEEG 291

Query: 332 KATSFSRSTSSIGGFRARTALGYSQSGQYVYVVAVEDNAN------SAGMSLTELQNFMA 385
           +  ++   T +I G  ARTA G S+ G+ +Y+VAVE  +       S GM+  EL  F+ 
Sbjct: 292 RLPAY--FTQNIAGKHARTAAGVSKDGKTLYLVAVEKQSASDGTVVSRGMTQEELAEFLI 349

Query: 386 NIGVWKGMNLDGGGSTTMVDRPLAETSATLTFNTEYGTEQRSIVNGLGVYTSAPKGEVKG 445
           +IGVW+ +NLDGGGSTT+  R L + + +L  N   G  QRS+ N +G++++AP G++KG
Sbjct: 350 SIGVWRAVNLDGGGSTTLAARHLGDFNVSL-INRPQGKSQRSVPNAIGIFSTAPPGKLKG 408

Query: 446 IKISGSTVLLIGQKATYSLKGYDTYYNPIDVAAGNPSWTASNGSVTVNGGEATAVXXXXX 505
           + ISG +VL+ G K  ++ KGYD YYNP+ +     SW+A+  +    G           
Sbjct: 409 LAISGPSVLIAGTKGEFTAKGYDQYYNPVRIEPEKVSWSAAPAAGKFEGSVFLPERGGTV 468

Query: 506 XXXXXXXXXXXXXEVTVLGGENLSSLTVGTATAPLTPGASVSVPVTALAENGASLTVPPA 565
                         V V+G E L+ L V  ++  + PG SV + V    + G +  +   
Sbjct: 469 TVQAALGSATGAAAVRVIGPEMLAGLVVSPSSISVEPGQSVELSVQVKTKEGETFALKSE 528

Query: 566 SLKWELVGFKGSVQDGKLT 584
            ++W + G  G + +GK T
Sbjct: 529 DVRWAVDGTAGVIANGKFT 547


>C1TEJ0.1 C1TEJ0_9FIRM Putative S-layer protein
          Length = 921

 Score =  238 bits (607), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 163/531 (30%), Positives = 261/531 (49%), Gaps = 41/531 (7%)

Query: 63  NVTKLGEEVITSGAIMMKYKFTTVRSGKKATGLADVIRVDLNNPYVSLDVMTGKGGKLTT 122
           ++  +  E+I+ G ++  Y +   R           I+VDL+NPYV +D M G  G L  
Sbjct: 34  DINPVNTEIISPGVVLQTYMYNKTR--------IYAIKVDLSNPYVKIDTMIGADGTLNK 85

Query: 123 RQSTGGMAAETGAVAAVNGDYFNTGGEGAPIXXXXXXXXXXXTPSQLNGMYAFAVTKDRK 182
            QS  GM + TGAVA +NG +F       PI           +P+    M  FAVT + +
Sbjct: 86  AQSLTGMTSRTGAVAGINGGFFQMKNH-RPIGLEFSNGNLVSSPAMREDMPGFAVTNNNQ 144

Query: 183 PVIDQYSFEGLLTAEDGAQFPLAGINKGAYSPEDG-SSTYSHANTAYIYTDAWTALERPK 241
            +I  + F G + +E+G  FPL GINK  Y  +DG S+  +H N   +Y   W    R  
Sbjct: 145 AIIGIFGFSGTVVSENGNSFPLFGINKPDYLLQDGQSADINHLN---LYNSFWGTETRSD 201

Query: 242 NSSTT-PTEVLVENDIITQISADKALSMAVPKGAYILRTHGLGAQFVKNHLAVGQKLSSV 300
            S  +   EV+V+ND++  ++ +K   + +P   Y+L  HG  AQF+  +L V  ++ + 
Sbjct: 202 VSGQSGIVEVVVQNDLVVSVNQNKP-GVPIPANGYVLEGHGAAAQFLLENLPVSSRVQTS 260

Query: 301 YTLKSKSTQQELDPASLQMMIGGHTILVNDGKATSFSRSTSSIGGFRARTALGYSQSGQY 360
           Y +  ++        +L+  +GG+T+LV DG+   F   T  I G  ARTA+G     + 
Sbjct: 261 YLVTPQT-------GNLRAALGGNTLLVQDGQLAPF---TQEITGNYARTAVGIMPDNKT 310

Query: 361 VYVVAVEDNANSAGMSLTELQNFMANIGVWKGMNLDGGGSTTMVDRPLAETSATLTFNTE 420
           +Y+ A E+   S G + T +  F+  +GV + +NLDGGGSTT+  R   +  A+L  N  
Sbjct: 311 LYLAAAENGNGSVGTTQTGMAEFLLALGVNRAVNLDGGGSTTLSARHAGDGEASL-INHP 369

Query: 421 YGTEQRSIVNGLGVYTSAPKGEVKGIKISGSTVLLIGQKATYSLKGYDTYYNPIDVAAGN 480
             T+QR + + +GV+++APKG + G+ ++G   +L G    Y++KGYD  YNP  V   +
Sbjct: 370 QLTQQRLLPDAVGVFSTAPKGNLGGLVVTGPDYVLGGTSVQYAVKGYDVNYNPYQVDQSS 429

Query: 481 PSWTA-------SNGSVTVNGGEATAVXXXXXXXXXXXXXXXXXXEVTVLGGENLSSLTV 533
            SW +       SN    ++GG+   +                     V+G E+LS L V
Sbjct: 430 VSWKSDPQNAFQSNIFHPLSGGDYKIIASVNGVAGEKTAH--------VIGAESLSELVV 481

Query: 534 GTATAPLTPGASVSVPVTALAENGASLTVPPASLKWELVGFKGSVQDGKLT 584
             A+  + PG SV+    A  ++G    +     + +L G  GS+ +   T
Sbjct: 482 SPASVIVEPGESVTFKTIAKTKSGQDYELYATDYQLQLQGDMGSLANNLFT 532


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.312    0.129    0.364 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 5,012,450,966
Number of extensions: 204599182
Number of successful extensions: 407658
Number of sequences better than 1.0e-05: 284
Number of HSP's gapped: 407371
Number of HSP's successfully gapped: 298
Length of query: 909
Length of database: 3,060,696,203
Length adjustment: 145
Effective length of query: 764
Effective length of database: 1,694,649,028
Effective search space: 1294711857392
Effective search space used: 1294711857392
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 136 (57.0 bits)