BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0327.0020.p (1341 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DEC4.1 B1DEC4_9BACL Outer membrane protein 405 e-110 B1DBG7.1 B1DBG7_9BACL S-layer domain protein 129 3e-27 C1TBX3.1 C1TBX3_9FIRM Putative molybodpterin-dependent oxidoredu... 119 3e-24 B1DD79.1 B1DD79_9BACL Metallophosphoesterase 119 3e-24 B1I5D6.1 B1I5D6_DESAP S-layer domain protein 115 3e-23 >B1DEC4.1 B1DEC4_9BACL Outer membrane protein Length = 1476 Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust. Identities = 373/1342 (27%), Positives = 614/1342 (45%), Gaps = 84/1342 (6%) Query: 43 ATSPAAGEKNISLGSSINLSFDRVVNPQSGDITITQAGNPFXXXXXXXXXXXXXXNYYEI 102 A SP +G +++ S + L F V SG +T++ + + I Sbjct: 163 AKSPDSGATKVAVDSKMILQFSEPVYAASGSVTLSSVTDTKNIPVTSSMVQGSGTSTITI 222 Query: 103 RWGADKPLEPNKSYTVSIPKGLFKDXXXXXXXX-----XXWEFTT--SPETSQGVSITEF 155 + P++ N Y+V+IP+ F+D W F T +P ++I Sbjct: 223 T--PNAPMDSNTDYSVTIPRTAFQDAAGNVMETGGASYVSWSFRTDIAP-----LNILTA 275 Query: 156 SPVNNSRPDSAALNXXXXXXXXXXXXXXXXXXXISSA-DNTLVQEFKFRDGEPNVNVQTD 214 P N + S + I +NT K + V Sbjct: 276 IPANYATSVSVLTDKLTMTFDHNIAAGTEKYIEIRDVKNNTTFARIKTSSSQ----VAIT 331 Query: 215 GTTTSVSMTLASKLNPGSTYYVLIDNYALKDDE---NRTFSGVSSGSMWSFTAKSTGVG- 270 G T +V++ + + N ++YYVL+D A + + N F G+++ + W+FT TG G Sbjct: 332 GMTATVTLPASPRFNANTSYYVLVDAGAFIETDSGLNYPFPGIANAAAWNFT---TGYGN 388 Query: 271 -------ANVSPAGGSTGVNPTSDLQLGFDRPMMPNAGVISLTPANNPGGTRYFNVNSTA 323 ++ P G T L L F P+ ++G I + + R V S Sbjct: 389 DTTKPALKSLQPTAGGILTATTGKLVLTFTEPVFQDSGTIEIRTVTSGTLFRSIPVTSGR 448 Query: 324 VTGGGTPTITIDAASE-----ANPLLEKTMYTVTVPQGAFHDQDGNLFPA-SGPLTWSYT 377 V+GGGT TITIDA S A + T Y +TV AF D G + + +W +T Sbjct: 449 VSGGGTDTITIDATSAYGGEAAKAFVNNTAYYITVGSRAFKDGVGLYYDGLTSSSSWRFT 508 Query: 378 TSE--VKGFGIEALSPADRSESVSLNPPIKITFNRNVVLNNAVAGPVILYKGDGTKLEST 435 ++ VK + A SPA+ S S + TF+ V +G + + T + Sbjct: 509 VTQDNVKPT-LVATSPANSSTSADPKGALSATFSEAV---QPGSGQIWIQCMSSTSSQCA 564 Query: 436 L-SVGSSA-------KEFIVTPAAAFDNNTTYYLDIANGAFVD-ANNSQVIYGGLSGKNA 486 SVG+S K+ I+ P A T YY+ I A D A N+ + G+ + Sbjct: 565 APSVGTSVSVDPLNNKKLIIMPNQALQAGTAYYVVIDPDAVTDLAGNT---FNGIQNEYQ 621 Query: 487 WSFQTYSLDKTAPVLKTALVDNNRTIRLIYDEALKTEAALLPSSFAVTVNDEKRAIDSIS 546 W+F+T D T P + + L N TI + Y+E L + SF +TV+ R++ +S Sbjct: 622 WAFKTLGGDTTPPAI-SKLEANGSTIVMTYNEDLMENSIPTAGSFYITVDGAYRSVIGVS 680 Query: 547 IQGDSIYIKLSTGITVGQVIKVSYSGGLRP------IQDLSGNNASTFSQYQVTNGVQSA 600 + G + + LS+ I GQ +K+SYS +P I+DLSGN A + + VT V + Sbjct: 681 VSGPKVTLTLSSNIVDGQQVKLSYS---KPSVATLGIRDLSGNQALSLASQTVTTAVDTT 737 Query: 601 LTTIKDGTLTGKTVLLNFNDTLQAVNPNAYSQFSVYADGYSLGTNAISSSGAKLNLSLDN 660 + GT G V L F+ L +V+ AYSQFSVY G ++ S+ K+ L+++ Sbjct: 738 QPQLTGGTAAGGIVTLIFSKNLASVSSYAYSQFSVYVGGNYYTPTSVYSTANKVILAVNA 797 Query: 661 AATNAQVIRVSYSAGSYPVADTNGQSVANFSDFYIRNSGDNVPPVFQSAAGSGNKIVLTY 720 + ++ +RVSYSAGSYP+ D G V+NFS++ + ++ D P Q+ G+ I++TY Sbjct: 798 SIDSSSSVRVSYSAGSYPLQDAAGNKVSNFSNYSLSSTVDTSLPTVQTIDAYGSSIIITY 857 Query: 721 NEGISSGSLPMNSQFSVLVGSKPNYVTAVAAGGTQVTLTLQSALAVNQPTTVSYVPGTTG 780 N+ + S P SQ+SVLV + VT V+ G+QV LT+ + VSY T Sbjct: 858 NKTLDSARRPSTSQYSVLVNNSLRSVTQVSVSGSQVLLTVSPDIPSGSSVKVSYSKLYTA 917 Query: 781 IADLNGNRAPYLNQQSVNISGTTVSD--ISSATITGDELLVTFNKTMQASSGLNANQFGV 838 +ADL+GN A + ++ + SD + A + G +L ++F KT+ +S ++ F V Sbjct: 918 VADLSGNEAAAFTNATASVGNGSSSDNGLYGAVVKGTKLTLSFWKTLNSSYAPSSAYFSV 977 Query: 839 RFDGSTVGIQSYYISGSTLKLTLSSVVKSGQTVDLSYMSGS-GTISDQNGNLLTSFTALS 897 + + S + ISG+++ LTL+ G V ++Y + S ++ +G ++ SFT ++ Sbjct: 978 KVNNSADPATNVTISGNSVVLTLAKAPSVGDAVTVTYYATSTNSLRTSDGTVINSFTNVT 1037 Query: 898 VQNMTGVAGNSSTAGRPSYLGTLAASEFGKEYPLLKTDSATAADDRSVYSQSVKRYNLTA 957 V N T + + P + G L T AT D S + RY + A Sbjct: 1038 VANQTTLIDS-----LPGGYEEASGGGIG-----LTTSMATQTSDISPAGYTTTRYTIQA 1087 Query: 958 ERLAASYDYVYKQGTS--ALAFEVPSTDLSAYVSVPLKPLLDAVNRDSKAAFLLRHGDHL 1015 ++L+ +Y G S + FEVPS++ +A V+VPL L A + ++F++++G Sbjct: 1088 DKLSTAYTAAKSAGISNARVVFEVPSSERAAVVAVPLTVLETAYRSSNGSSFVVQYGTSS 1147 Query: 1016 YRLALNDVNMNSLAATLIADSNNISLVLRLEKVPAGTFTPFEQKLQSQGLQTVTGLMDIR 1075 Y + L+ + S+A+ + + S +L++++EK + + G ++ + Sbjct: 1148 YEIPLSALAFKSMASLIGSSSTTGNLLIKIEKGSNSNTSGLTSAISKAGASLLSTPITFE 1207 Query: 1076 LSAAVSSNYANTTALSVPAEYAVRTTATLNSDQXXXXXXXXXXXXXXXXPTKLSSAGSYT 1135 S + N + + + + ++N+ PT S+ Sbjct: 1208 TSVVNGTTEKNLSEFGGYVKRSFESLTSVNATNSAVVWLDPQTGKLSYVPTAFSTENGTN 1267 Query: 1136 VITASTIGNQVVGTFLSTRSFTDMNTHWSKAIVSQLAAKNIIDSSYGST--FKPEQKITR 1193 +++ GN + FTD+ +HW+ + + ++ K II+ GST F P+ ITR Sbjct: 1268 IVSFKRKGNSSYALVSGSSKFTDIGSHWAGSTIKMMSNKFIIEGRSGSTTKFDPQSSITR 1327 Query: 1194 AEFAVMXXXXXXXXXXXETAQRFRDVQPSTQTGDYXXXXXXXXXXXXNTDATFRPNDNIT 1253 AEFA A +++DV T T Y NTD TF+PN IT Sbjct: 1328 AEFAAYIVRGLGLSGSRSDASKYKDVTGGTVTAAYIGAASKAGIVTGNTDGTFKPNSPIT 1387 Query: 1254 REQLAIMIIRAMEYTGRPITLNGTSATALVAFKDRSKIQNQAAEFVAKAVQQGIILGMTT 1313 R+++A+M+ RA + I+L + AT L F DR+K+ + A +AKAV G+I G T Sbjct: 1388 RQEMAVMMSRATKAAAVTISLPQSDATYLSKFSDRTKVASWAKSDLAKAVYMGVITGQTE 1447 Query: 1314 TEFQPQGNATRAQAAVMLQRML 1335 T F P NATRA+A VM++R+L Sbjct: 1448 TTFGPTKNATRAEAIVMIKRLL 1469 Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 92/314 (29%), Positives = 157/314 (50%), Gaps = 33/314 (10%) Query: 211 VQTDGTTTSVSMTLASKLNPGSTYYVLIDNYALKDDENRT-FSGVSSGSMWSFTAKST-- 267 ++ D T + ++ + LN + YYVLID A + N ++G+SS + W+F + Sbjct: 96 IRLDATGRTATINPDANLNVNTDYYVLIDYGAFANVSNGAYYAGISSATTWNFRTAAVVD 155 Query: 268 GVGANV---SPAGGSTGVNPTSDLQLGFDRPMMPNAGVISLTPANNPGGTRYFNVNSTAV 324 G ++ SP G+T V S + L F P+ +G ++L+ + T+ V S+ V Sbjct: 156 TTGPSIIAKSPDSGATKVAVDSKMILQFSEPVYAASGSVTLSSVTD---TKNIPVTSSMV 212 Query: 325 TGGGTPTITIDAASEANPLLEKTMYTVTVPQGAFHDQDGNLFPASGP--LTWSYTTSEVK 382 G GT TITI + P+ T Y+VT+P+ AF D GN+ G ++WS+ T ++ Sbjct: 213 QGSGTSTITI---TPNAPMDSNTDYSVTIPRTAFQDAAGNVMETGGASYVSWSFRT-DIA 268 Query: 383 GFGIEALSPADRSESVS-LNPPIKITFNRNVVLNNAVAGPVILYKGDGTKLESTLS-VGS 440 I PA+ + SVS L + +TF+ N+ AG + K +T + + + Sbjct: 269 PLNILTAIPANYATSVSVLTDKLTMTFDHNI-----AAGTEKYIEIRDVKNNTTFARIKT 323 Query: 441 SAKEFIVT--------PAAA-FDNNTTYYLDIANGAFVDANNS-QVIYGGLSGKNAWSFQ 490 S+ + +T PA+ F+ NT+YY+ + GAF++ ++ + G++ AW+F Sbjct: 324 SSSQVAITGMTATVTLPASPRFNANTSYYVLVDAGAFIETDSGLNYPFPGIANAAAWNFT 383 Query: 491 T-YSLDKTAPVLKT 503 T Y D T P LK+ Sbjct: 384 TGYGNDTTKPALKS 397 Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 74/236 (31%), Positives = 107/236 (45%), Gaps = 30/236 (12%) Query: 273 VSPAGGSTGVNPTSDLQLGFDRPMMPNA--GVISLTPANN-------PGGTRYFNVNSTA 323 +SPA + GV PTSDL L FD + A VI++ N P + +++T Sbjct: 43 MSPADNAIGVTPTSDLTLTFDEAVTKGADSAVITIYNYNTSDIVESIPMSSYKIRLDAT- 101 Query: 324 VTGGGTPTITIDAASEANPLLEKTMYTVTVPQGAFHDQDGNLFPA--SGPLTWSYTTSEV 381 G T TI DA N T Y V + GAF + + A S TW++ T+ V Sbjct: 102 ---GRTATINPDANLNVN-----TDYYVLIDYGAFANVSNGAYYAGISSATTWNFRTAAV 153 Query: 382 ---KGFGIEALSPADRSESVSLNPPIKITFNRNVVLNNAVAGPVILYKGDGTK---LEST 435 G I A SP + V+++ + + F+ V A +G V L TK + S+ Sbjct: 154 VDTTGPSIIAKSPDSGATKVAVDSKMILQFSEPVY---AASGSVTLSSVTDTKNIPVTSS 210 Query: 436 LSVGSSAKEFIVTPAAAFDNNTTYYLDIANGAFVDANNSQVIYGGLSGKNAWSFQT 491 + GS +TP A D+NT Y + I AF DA + + GG S +WSF+T Sbjct: 211 MVQGSGTSTITITPNAPMDSNTDYSVTIPRTAFQDAAGNVMETGGAS-YVSWSFRT 265 >B1DBG7.1 B1DBG7_9BACL S-layer domain protein Length = 2206 Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 86/315 (27%), Positives = 143/315 (45%), Gaps = 7/315 (2%) Query: 1028 LAATLIADSNNISLVLRLEKVPAGTFTPFEQKLQSQGLQTVTGLMDIRLSAAVSSNYANT 1087 L A I+D+ N ++ A + + QG+ TV +D ++ + Sbjct: 1896 LKANGISDTANAIWTFSIQSPSADLTAKLNKDAEDQGVTTVGSALDFSITVQSGAQTVVI 1955 Query: 1088 TALS-VPAEYAVRTTATLNSDQXXXXXXXXXXXXXXXXPTKLSSAGSYTVITASTIGNQV 1146 T+ V E + + + P ++ TV+T ++GN + Sbjct: 1956 TSFGGVYVERTITVDGVQEAGKLTVLVYDPATGTFSSVPALITVKDGKTVVTIKSMGNSI 2015 Query: 1147 VGTFLSTRSFTDMNTHWSKAIVSQLAAKNIIDSSYGSTFKPEQKITRAEFAVMXXXXXXX 1206 R+FTD +HW+KA ++ LA K I++ F+PE+ +TRAEFA M Sbjct: 2016 YTAAKLDRTFTDTASHWAKADIALLAGKGILNGVSAGKFEPERAVTRAEFAAMLVRALGI 2075 Query: 1207 XXXXETAQRFRDVQPSTQTGDYXXXXXXXXXXXXNTDATFRPNDNITREQLAIMIIRAME 1266 E A+ F+DV + +D TFRPN +TRE++A+M ++A+E Sbjct: 2076 RQIGE-ARTFKDVPAGGWYEETVKLASGAGIINGYSDGTFRPNSKVTREEMAMMAVKAIE 2134 Query: 1267 YTGRPITLNGTSATALVAFKDRSKIQNQAAEFVAKAVQQGIILGMTTTEFQPQGNATRAQ 1326 + + A A + +KD +I + A++ V KA G++ GM F P G+ TRA+ Sbjct: 2135 -----LATSSKLAAADLNYKDAGRISDWASDAVGKATGAGLLKGMPDGSFAPAGSVTRAE 2189 Query: 1327 AAVMLQRMLTMAGYL 1341 AA +L+R+L AG L Sbjct: 2190 AATLLKRLLVSAGLL 2204 >C1TBX3.1 C1TBX3_9FIRM Putative molybodpterin-dependent oxidoreductase/S-layer protein Length = 935 Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 75/220 (34%), Positives = 111/220 (50%), Gaps = 5/220 (2%) Query: 1125 PTKLSS--AGSYTVITASTIGNQVVGTFLSTRSFTDMNTHWSKAIVSQLAAKNIIDSSYG 1182 PT+ + SY +I T N + S++SF+D+ +W+K + LA K +I Sbjct: 696 PTRFETRDGKSYAIILNRT--NSLYTVLQSSKSFSDIQGNWAKDDIEMLAGKMLISGKND 753 Query: 1183 STFKPEQKITRAEFAVMXXXXXXXXXXXETAQRFRDVQPSTQTGDYXXXXXXXXXXXXNT 1242 +T++P+ ITRAEFA + +F+DV S Sbjct: 754 TTYEPDSNITRAEFATLLVRALALEEGVLHEGQFKDVLVSDWYAGSVAAATGENIIAGYD 813 Query: 1243 DATFRPNDNITREQLAIMIIRAMEYTGRPITLNGTSATA-LVAFKDRSKIQNQAAEFVAK 1301 F+P DNITRE++A+MI RA G+ TL+ + L FKD+ +I + A + VA Sbjct: 814 GGLFKPADNITREKVAVMIARAARVAGKEDTLSASEQVQQLDQFKDKKEIASWATKDVAL 873 Query: 1302 AVQQGIILGMTTTEFQPQGNATRAQAAVMLQRMLTMAGYL 1341 AV+ GII GM F P+ NA RAQ+AVML+R LT ++ Sbjct: 874 AVKIGIIEGMPGGNFAPKANADRAQSAVMLKRFLTYINFI 913 >B1DD79.1 B1DD79_9BACL Metallophosphoesterase Length = 2168 Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 88/356 (24%), Positives = 155/356 (43%), Gaps = 15/356 (4%) Query: 989 SVPLKPLLDAVNRDSKAAFLLRHGDHLYRLALNDVNMNSLAATLIADSNNISLVLRLEKV 1048 +P + LLDA+ + + G+ Y L + +N+ + T + S+V+++ + Sbjct: 1825 ELPARVLLDALKQAPNLTISVVMGNASYDLPIRALNLPTTIGT------DASIVIKINQA 1878 Query: 1049 PAGTFTPFEQKLQSQGLQTVTGLMDIRLSAAVSSNYANTTALSVPAEYAVRT---TATLN 1105 + + K G++ + + S + +N Y RT TL+ Sbjct: 1879 DSTLSGTMKDKAAKAGVKLIG--TPVEFSVILQANGNTKEIHDFGKTYVSRTLDINQTLD 1936 Query: 1106 SDQXXXXXXXXXXXXXXXXPTKLSSAGSYTVITASTIGNQVVGTFLSTRSFTDMNTHWSK 1165 + P +T++T GN + ++F+D++ HW+K Sbjct: 1937 ASHSTAVMYNEATGAFTFVPATFKKVNGHTIVTIQRNGNSIYAVAQLNKTFSDLSKHWAK 1996 Query: 1166 AIVSQLAAKNIIDSSYGSTFKPEQKITRAEFAVMXXXXXXXXXXXETAQRFRDVQPSTQT 1225 A + +A+K I+ + + F P +TRAEFA M + A F+DV Sbjct: 1997 ADIELMASKLIVKGTSNTKFAPNAVVTRAEFAAM-VVRALGISEDQAAASFKDVSSKNWF 2055 Query: 1226 GDYXXXXXXXXXXXXNTDATFRPNDNITREQLAIMIIRAMEYTGRPITLNGTSATALVAF 1285 +F+PN +ITRE++A+MI RA+ + G+ +A+ L F Sbjct: 2056 AGAVGAAVKAGIVKGYDGNSFKPNASITREEMAVMISRALVFAGKQ---PAGAASQLNVF 2112 Query: 1286 KDRSKIQNQAAEFVAKAVQQGIILGMTTTEFQPQGNATRAQAAVMLQRMLTMAGYL 1341 KD++ I+ A + VA+AV+ II G T F P ATRA+A VML+R+L ++ Sbjct: 2113 KDKASIEAWAKQAVAQAVEAKIIEGKTGGNFAPGSKATRAEATVMLKRLLEYVDFI 2168 >B1I5D6.1 B1I5D6_DESAP S-layer domain protein Length = 573 Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 66/187 (35%), Positives = 92/187 (49%), Gaps = 1/187 (0%) Query: 1156 FTDMNTHWSKAIVSQLAAKNIIDSSYGSTFKPEQKITRAEFAVMXXXXXXXXXXXETAQR 1215 FTD++ HW++ ++ +A K I TF+P +TRA+FA + R Sbjct: 387 FTDISGHWAEHDINLMAGKGIAGGYPDGTFRPNANVTRAQFAALLIRTLGITEQAAKGGR 446 Query: 1216 FRDVQPSTQTGDYXXXXXXXXXXXXNTDATFRPNDNITREQLAIMIIRAMEYTGRPITLN 1275 F DV D +F+PN NITR++LA M+ R + Y G+ + L+ Sbjct: 447 FTDVAAKAWYAGAVETAAAAGLVGGYPDGSFKPNANITRQELAAMVTRGLAYQGKDVKLS 506 Query: 1276 GTSATALVA-FKDRSKIQNQAAEFVAKAVQQGIILGMTTTEFQPQGNATRAQAAVMLQRM 1334 A++A F D +KI A A A QGI+ G T F PQ NATRA+A VML+RM Sbjct: 507 AAEVEAILARFSDAAKISPWARNVAAVAADQGIVGGRTGNTFAPQENATRAEAIVMLKRM 566 Query: 1335 LTMAGYL 1341 L G L Sbjct: 567 LAATGKL 573 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.311 0.127 0.350 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 7,064,139,266 Number of extensions: 290600576 Number of successful extensions: 606823 Number of sequences better than 1.0e-05: 575 Number of HSP's gapped: 605290 Number of HSP's successfully gapped: 685 Length of query: 1341 Length of database: 3,060,696,203 Length adjustment: 148 Effective length of query: 1193 Effective length of database: 1,666,385,983 Effective search space: 1987998477719 Effective search space used: 1987998477719 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 138 (57.8 bits)