BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0327.0019.p (393 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K7H4.1 B3K7H4_9BACI S-adenosylmethionine synthetase EC=2.5.1.6 741 0.0 B1DEC5.1 B1DEC5_9BACL S-adenosylmethionine synthetase EC=2.5.1.6 688 0.0 C5D6E9.1 C5D6E9_9BACI S-adenosylmethionine synthetase EC=2.5.1.6 644 0.0 B7GK42.1 B7GK42_ANOFW S-adenosylmethionine synthetase EC=2.5.1.6 642 0.0 B4ANN1.1 B4ANN1_BACPU S-adenosylmethionine synthetase EC=2.5.1.6 642 0.0 >B3K7H4.1 B3K7H4_9BACI S-adenosylmethionine synthetase EC=2.5.1.6 Length = 401 Score = 741 bits (1912), Expect = 0.0, Method: Compositional matrix adjust. Identities = 359/393 (91%), Positives = 376/393 (95%) Query: 1 LFTSESVTEGHPDKICDQISDAVLDAFLANDPNARVACEVAVATGLVLVIGEISTKSEYV 60 LFTSESVTEGHPDKICDQISDAVLDAFLANDPNARVACEV+VATGLVLVIGEISTKSEYV Sbjct: 8 LFTSESVTEGHPDKICDQISDAVLDAFLANDPNARVACEVSVATGLVLVIGEISTKSEYV 67 Query: 61 DIPAIVRNTLKEIGYTRAKYGFDYNTCAVLTSLNEQSADIAQGVNAALENRDPAQVAEET 120 DIP+IVRNT+KEIGYTRAKYGFD NTCAVLTSLNEQSADIAQGVNAALENRDP+QV +ET Sbjct: 68 DIPSIVRNTVKEIGYTRAKYGFDSNTCAVLTSLNEQSADIAQGVNAALENRDPSQVDKET 127 Query: 121 ANIGAGDQGLMFGFATNETPELMPLPIALSHRIARRLSEVRKDGTLNYLRPDGKTQVTIE 180 NIGAGDQGLMFGFATNETPELMPLPIALSHRIARRLSEVRKDGTL+YLRPDGKTQVTIE Sbjct: 128 ENIGAGDQGLMFGFATNETPELMPLPIALSHRIARRLSEVRKDGTLDYLRPDGKTQVTIE 187 Query: 181 YDNERPVRVDTIVVSTQHAEEISLEQIQADIKEYVILPVVPSELLDENTKYFINPTGRFV 240 YD PVRVDTIVVSTQHAEE +LEQIQ DIKE VILPVVP+ELLD TKYFINPTGRFV Sbjct: 188 YDGNTPVRVDTIVVSTQHAEEATLEQIQKDIKEQVILPVVPAELLDAETKYFINPTGRFV 247 Query: 241 IGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNLVAAGLA 300 IGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNLVAAGLA Sbjct: 248 IGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNLVAAGLA 307 Query: 301 DKCEIQLAYAIGVANPVSINVDTYGTGKISEEKLAELISSNFDLRPAGIISMLDLRKPRY 360 DKCEIQLAYAIGVANPVSI+VDTYGTGK+SEEKL EL+ +NFDLRPAGII MLDLR+P Y Sbjct: 308 DKCEIQLAYAIGVANPVSISVDTYGTGKVSEEKLVELVRNNFDLRPAGIIRMLDLRRPIY 367 Query: 361 RQTAAYGHFGRTDVDLPWERVDKAEMLRGQAGL 393 +QTAAYGHFGRTD+DLPWERVDKAE L+ QAG+ Sbjct: 368 KQTAAYGHFGRTDLDLPWERVDKAEALKEQAGV 400 >B1DEC5.1 B1DEC5_9BACL S-adenosylmethionine synthetase EC=2.5.1.6 Length = 402 Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/391 (86%), Positives = 357/391 (91%) Query: 1 LFTSESVTEGHPDKICDQISDAVLDAFLANDPNARVACEVAVATGLVLVIGEISTKSEYV 60 LFTSESVTEGHPDKICDQISDAVLDAFL DP ARVACEV+VATGLVLVIGEIS++++YV Sbjct: 8 LFTSESVTEGHPDKICDQISDAVLDAFLEADPYARVACEVSVATGLVLVIGEISSRADYV 67 Query: 61 DIPAIVRNTLKEIGYTRAKYGFDYNTCAVLTSLNEQSADIAQGVNAALENRDPAQVAEET 120 DI AI R T+KEIGYTRAKYGFD +TCAVLTSLNEQSADIAQGVNAALE+RD V +E Sbjct: 68 DISAIARRTIKEIGYTRAKYGFDSSTCAVLTSLNEQSADIAQGVNAALESRDGKDVQKEN 127 Query: 121 ANIGAGDQGLMFGFATNETPELMPLPIALSHRIARRLSEVRKDGTLNYLRPDGKTQVTIE 180 +IGAGDQGLMFGFATNETPELMPLPIALSHRIARRLSEVRK+ TL YLRPDGKTQVTIE Sbjct: 128 EDIGAGDQGLMFGFATNETPELMPLPIALSHRIARRLSEVRKNDTLGYLRPDGKTQVTIE 187 Query: 181 YDNERPVRVDTIVVSTQHAEEISLEQIQADIKEYVILPVVPSELLDENTKYFINPTGRFV 240 Y + +PVRVDTIVVSTQHAEEISLEQIQ DI E+VI PVVP E LDE TKYFINPTGRFV Sbjct: 188 YVDGKPVRVDTIVVSTQHAEEISLEQIQKDILEHVIKPVVPVEWLDEQTKYFINPTGRFV 247 Query: 241 IGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNLVAAGLA 300 IGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKN+VAAGLA Sbjct: 248 IGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLA 307 Query: 301 DKCEIQLAYAIGVANPVSINVDTYGTGKISEEKLAELISSNFDLRPAGIISMLDLRKPRY 360 DKCEIQLAYAIGVA PVSINVDTYGTGK+SEE L ++I NFDLRPAGII MLDLR+P Y Sbjct: 308 DKCEIQLAYAIGVAQPVSINVDTYGTGKVSEELLVDVIKKNFDLRPAGIIKMLDLRRPIY 367 Query: 361 RQTAAYGHFGRTDVDLPWERVDKAEMLRGQA 391 QTAAYGHFGRTDVDLPWERVDKAE L+ A Sbjct: 368 AQTAAYGHFGRTDVDLPWERVDKAENLKADA 398 >C5D6E9.1 C5D6E9_9BACI S-adenosylmethionine synthetase EC=2.5.1.6 Length = 403 Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust. Identities = 309/392 (78%), Positives = 348/392 (88%), Gaps = 2/392 (0%) Query: 1 LFTSESVTEGHPDKICDQISDAVLDAFLANDPNARVACEVAVATGLVLVIGEISTKSEYV 60 LFTSESVTEGHPDKICDQISDA+LDA L DPNARVACE +V TGLVLV GEI+T S YV Sbjct: 7 LFTSESVTEGHPDKICDQISDAILDAILEKDPNARVACETSVTTGLVLVSGEITT-STYV 65 Query: 61 DIPAIVRNTLKEIGYTRAKYGFDYNTCAVLTSLNEQSADIAQGVNAALENRDPAQVAEET 120 DIP IVR+T++EIGYTRAKYGFD +TCAVLTS++EQS DIA GV+ ALE R+ EE Sbjct: 66 DIPKIVRDTVREIGYTRAKYGFDADTCAVLTSIDEQSPDIAMGVDKALEAREGQMTDEEI 125 Query: 121 ANIGAGDQGLMFGFATNETPELMPLPIALSHRIARRLSEVRKDGTLNYLRPDGKTQVTIE 180 IGAGDQGLMFGFA NET ELMPLPI+L+HR+ARRLSEVRK+ L YLRPDGKTQVT+E Sbjct: 126 EAIGAGDQGLMFGFACNETKELMPLPISLAHRLARRLSEVRKEAILPYLRPDGKTQVTVE 185 Query: 181 YD-NERPVRVDTIVVSTQHAEEISLEQIQADIKEYVILPVVPSELLDENTKYFINPTGRF 239 YD N +PVR+DTIVVS QH EI+ EQI+ DIKE+VI P+VP+EL+DENTKYFINPTGRF Sbjct: 186 YDENGKPVRIDTIVVSAQHHPEITQEQIERDIKEHVIKPIVPAELIDENTKYFINPTGRF 245 Query: 240 VIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNLVAAGL 299 VIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKN+VA+GL Sbjct: 246 VIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVASGL 305 Query: 300 ADKCEIQLAYAIGVANPVSINVDTYGTGKISEEKLAELISSNFDLRPAGIISMLDLRKPR 359 ADKCE+QLAYAIGVA PVSI++DT+GTGK+SE+ L E++ +NFDLRPAGII MLDLR+P Sbjct: 306 ADKCEVQLAYAIGVARPVSISIDTFGTGKVSEDILIEVVRNNFDLRPAGIIKMLDLRRPI 365 Query: 360 YRQTAAYGHFGRTDVDLPWERVDKAEMLRGQA 391 Y+QTAAYGHFGRTD+DLPWER DKAE L+ QA Sbjct: 366 YKQTAAYGHFGRTDIDLPWERTDKAETLKEQA 397 >B7GK42.1 B7GK42_ANOFW S-adenosylmethionine synthetase EC=2.5.1.6 Length = 401 Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust. Identities = 310/392 (79%), Positives = 349/392 (89%), Gaps = 2/392 (0%) Query: 1 LFTSESVTEGHPDKICDQISDAVLDAFLANDPNARVACEVAVATGLVLVIGEISTKSEYV 60 LFTSESVTEGHPDKICDQISDA+LDA LANDPNARVACE +V TGLVLV GEI+T S YV Sbjct: 6 LFTSESVTEGHPDKICDQISDAILDAILANDPNARVACETSVTTGLVLVSGEITT-STYV 64 Query: 61 DIPAIVRNTLKEIGYTRAKYGFDYNTCAVLTSLNEQSADIAQGVNAALENRDPAQVAEET 120 DIP IVR T++EIGYTRAKYGFD +TCAVLTS++EQS DIA GV+ ALE R+ EE Sbjct: 65 DIPKIVRETIREIGYTRAKYGFDADTCAVLTSIDEQSPDIAMGVDKALEAREGQMTDEEI 124 Query: 121 ANIGAGDQGLMFGFATNETPELMPLPIALSHRIARRLSEVRKDGTLNYLRPDGKTQVTIE 180 IGAGDQGLMFGFA NET ELMPLPI+L+H++ARRL+EVRK+ L YLRPDGKTQVT+E Sbjct: 125 EAIGAGDQGLMFGFACNETKELMPLPISLAHKLARRLAEVRKEDILPYLRPDGKTQVTVE 184 Query: 181 YD-NERPVRVDTIVVSTQHAEEISLEQIQADIKEYVILPVVPSELLDENTKYFINPTGRF 239 YD N +PVR+DTIVVSTQH EI+ +QI +IKE+VI PVVP+EL+DENTKYFINPTGRF Sbjct: 185 YDENGKPVRIDTIVVSTQHHPEITQDQIVRNIKEHVIQPVVPAELIDENTKYFINPTGRF 244 Query: 240 VIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNLVAAGL 299 VIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKN+VAAGL Sbjct: 245 VIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGL 304 Query: 300 ADKCEIQLAYAIGVANPVSINVDTYGTGKISEEKLAELISSNFDLRPAGIISMLDLRKPR 359 ADKCE+QLAYAIGVA PVSI++DT+GTGK+SE+ L E++ +NFDLRPAGII MLDLR+P Sbjct: 305 ADKCEVQLAYAIGVAQPVSISIDTFGTGKVSEDVLIEVVRNNFDLRPAGIIKMLDLRRPI 364 Query: 360 YRQTAAYGHFGRTDVDLPWERVDKAEMLRGQA 391 Y+QTAAYGHFGRTD+DLPWER DKAE L+ QA Sbjct: 365 YKQTAAYGHFGRTDIDLPWERTDKAEALKQQA 396 >B4ANN1.1 B4ANN1_BACPU S-adenosylmethionine synthetase EC=2.5.1.6 Length = 400 Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust. Identities = 305/392 (77%), Positives = 348/392 (88%), Gaps = 2/392 (0%) Query: 1 LFTSESVTEGHPDKICDQISDAVLDAFLANDPNARVACEVAVATGLVLVIGEISTKSEYV 60 LFTSESVTEGHPDKICDQISD++LD L DPNARVACE +V TGLVLV GEI+T S YV Sbjct: 7 LFTSESVTEGHPDKICDQISDSILDEILKKDPNARVACETSVTTGLVLVSGEITT-STYV 65 Query: 61 DIPAIVRNTLKEIGYTRAKYGFDYNTCAVLTSLNEQSADIAQGVNAALENRDPAQVAEET 120 DIP VR+T+KEIGYTRAKYGFD TCAVLTS++EQSADIAQGV+ ALE R+ EE Sbjct: 66 DIPKTVRDTIKEIGYTRAKYGFDAETCAVLTSIDEQSADIAQGVDKALEAREGTMTEEEL 125 Query: 121 ANIGAGDQGLMFGFATNETPELMPLPIALSHRIARRLSEVRKDGTLNYLRPDGKTQVTIE 180 IGAGDQGLMFGFA NET ELMPLPI+L+H+++ RL+EVRKD TL YLRPDGKTQVT+E Sbjct: 126 DAIGAGDQGLMFGFANNETEELMPLPISLAHKLSLRLTEVRKDQTLAYLRPDGKTQVTVE 185 Query: 181 YDNE-RPVRVDTIVVSTQHAEEISLEQIQADIKEYVILPVVPSELLDENTKYFINPTGRF 239 YD++ +PVR+DT+V+STQHA E++LEQIQ+D+KE+VI PVVPSEL+DE TKYFINPTGRF Sbjct: 186 YDDQNKPVRIDTVVISTQHAPEVTLEQIQSDLKEHVISPVVPSELIDEQTKYFINPTGRF 245 Query: 240 VIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNLVAAGL 299 VIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKD TKVDRSAAYAARYVAKN+VAAGL Sbjct: 246 VIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSAAYAARYVAKNIVAAGL 305 Query: 300 ADKCEIQLAYAIGVANPVSINVDTYGTGKISEEKLAELISSNFDLRPAGIISMLDLRKPR 359 AD CE+QLAYAIGVA PVSI++DT+GTGK SEEKL E++ +NFDLRPAGII MLDLR+P Sbjct: 306 ADSCEVQLAYAIGVAQPVSISIDTFGTGKASEEKLIEVVRANFDLRPAGIIKMLDLRRPI 365 Query: 360 YRQTAAYGHFGRTDVDLPWERVDKAEMLRGQA 391 Y+QTAAYGHFGR D+DLPWE+ DKA+ LR +A Sbjct: 366 YKQTAAYGHFGRHDLDLPWEKTDKADTLRKEA 397 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.316 0.135 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,376,582,035 Number of extensions: 103221480 Number of successful extensions: 280509 Number of sequences better than 1.0e-05: 2073 Number of HSP's gapped: 274013 Number of HSP's successfully gapped: 2082 Length of query: 393 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 255 Effective length of database: 1,760,596,133 Effective search space: 448952013915 Effective search space used: 448952013915 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 132 (55.5 bits)