BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0327.0012.p (363 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K7I0.1 B3K7I0_9BACI Glycosyl transferase family 4 478 e-133 B1DED2.1 B1DED2_9BACL Glycosyl transferase family 4 384 e-105 Q2BF31.1 Q2BF31_9BACI Putative uncharacterized protein 297 8e-79 A2RH65.1 A2RH65_BACME TagO protein 285 6e-75 A4ISX0.1 A4ISX0_GEOTN Glycosyl transferase group 4 family protein 273 2e-71 >B3K7I0.1 B3K7I0_9BACI Glycosyl transferase family 4 Length = 396 Score = 478 bits (1230), Expect = e-133, Method: Compositional matrix adjust. Identities = 240/362 (66%), Positives = 269/362 (74%) Query: 1 MGLALLLTPLVKKFAVKIGATDVPNARKVHTKIMPRXXXXXXXXXXXXXXXXXXPIIPYD 60 + LAL LTPLVKKFAVKIGA DVPNARKVHT+IMPR P +P Sbjct: 35 LALALFLTPLVKKFAVKIGAVDVPNARKVHTRIMPRLGGLGIYLAFILGLIAVLPFLPDS 94 Query: 61 FTPREANFIKXXXXXXXXXXXXXXXDDRFELSAKVKLLGQIAAACIVVFGFGITVDFVNI 120 +PR+ANF+K DDRFELSAKVK L QIAAAC+VVFGF ITVDFVNI Sbjct: 95 LSPRDANFMKAFLIGGSMIVLIGALDDRFELSAKVKFLAQIAAACVVVFGFNITVDFVNI 154 Query: 121 PFNNSYSSLESWIAIPLTIFWIVGVTNAVNLIDGLDGLAAGVSGIAIATIAVMAFLMGNT 180 PF + YS LESW++IPLTIFWIVGVTNA+NLIDGLDGLAAGVSGIAI TI VMA LMGNT Sbjct: 155 PFQDRYSMLESWVSIPLTIFWIVGVTNAINLIDGLDGLAAGVSGIAIGTILVMAVLMGNT 214 Query: 181 MVAXXXXXXXXXXXXXXXXXXHPAKIFMGDTGSXXXXXXXXXXXXXXXKQIAVVSFITPL 240 VA HPAKIFMGDTGS KQIA+VSFITPL Sbjct: 215 TVALLCLLLLGSIIGFLFFNFHPAKIFMGDTGSLFLGFSLAMLSLLGFKQIAIVSFITPL 274 Query: 241 LIIGVPLSDTFFAIVRRKLQKKPIFAPDKGHLHHCLRELGFSHRQTVLIIYGIAGFFGIL 300 +IIGVPLSDTFFAI+RRK+QKKPIFAPDKGHLHHCLRELGFSHRQTVLIIY IA FFG+L Sbjct: 275 IIIGVPLSDTFFAIIRRKIQKKPIFAPDKGHLHHCLRELGFSHRQTVLIIYVIAAFFGVL 334 Query: 301 AVIQTSASLYEANWVTFVVICVMLFFLQIGAEITGVISKTKRPLIDFLLRMRVKANPERG 360 AVIQ+SA++YEANWVTFVVICVM+ F+QIGAE+ G++ KTKRP++ + RMR+KANPE Sbjct: 335 AVIQSSAAMYEANWVTFVVICVMMCFMQIGAEVIGLVGKTKRPILGLINRMRMKANPESR 394 Query: 361 SK 362 +K Sbjct: 395 TK 396 >B1DED2.1 B1DED2_9BACL Glycosyl transferase family 4 Length = 378 Score = 384 bits (987), Expect = e-105, Method: Compositional matrix adjust. Identities = 197/362 (54%), Positives = 239/362 (66%), Gaps = 2/362 (0%) Query: 3 LALLLTPLVKKFAVKIGATDVPNARKVHTKIMPRXXXXXXXXXXXXXXXXXXPIIPYDFT 62 +AL++TPLVKKFA K+GA D PN RKVHT+IMPR P IP Sbjct: 17 IALVMTPLVKKFAFKVGAIDKPNHRKVHTRIMPRMGGLGIYLAFAVGFLILMPFIPDGLL 76 Query: 63 PREA-NFIKXXXXXXXXXXXXXXXDDRFELSAKVKLLGQIAAACIVVFGFGITVDFVNIP 121 E N I+ DDRFELSAKVKL+ QIAAAC+VVFGFG+ +D +N+P Sbjct: 77 NHEGENLIRAVLVGGTMIILIGAFDDRFELSAKVKLVAQIAAACVVVFGFGVKIDLLNVP 136 Query: 122 FNNSYSSLESWIAIPLTIFWIVGVTNAVNLIDGLDGLAAGVSGIAIATIAVMAFLMGNTM 181 F + +E+WI+IP+TIFWIVGVTNA+NLIDGLDGLA GVS IAI TI VMA +MGN Sbjct: 137 FGATMQPIEAWISIPITIFWIVGVTNAINLIDGLDGLAGGVSAIAIGTILVMAIIMGNVP 196 Query: 182 VAXXXXXXXXXXXXXXXXXXHPAKIFMGDTGSXXXXXXXXXXXXXXXKQIAVVSFITPLL 241 + HPAKIFMGD+GS KQI +VSF+TPLL Sbjct: 197 IILLSVLLLGGIVGFLYFNFHPAKIFMGDSGSLFLGFCLAMLSMTSFKQITIVSFVTPLL 256 Query: 242 IIGVPLSDTFFAIVRRKLQKKPIFAPDKGHLHHCLRELGFSHRQTVLIIYGIAGFFGILA 301 IIGVPLSDTFFAI+RR + K+PIFAPDKGHLHHCL+ELGFSHR+TVLII+ +A FG A Sbjct: 257 IIGVPLSDTFFAIIRRLVNKRPIFAPDKGHLHHCLQELGFSHRKTVLIIWSVAAVFGGFA 316 Query: 302 VIQ-TSASLYEANWVTFVVICVMLFFLQIGAEITGVISKTKRPLIDFLLRMRVKANPERG 360 V+Q T ANW+TF+VIC+++F LQIGAE+ G++ K++RPLI+FL RM R Sbjct: 317 VLQSTVVQSTSANWITFIVICLVIFSLQIGAELIGIVDKSRRPLINFLNRMLRSKVDARS 376 Query: 361 SK 362 SK Sbjct: 377 SK 378 >Q2BF31.1 Q2BF31_9BACI Putative uncharacterized protein Length = 378 Score = 297 bits (761), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 166/357 (46%), Positives = 213/357 (59%), Gaps = 17/357 (4%) Query: 4 ALLLTPLVKKFAVKIGATDVPNARKVHTKIMPRXXXXXXXXXXXXXXXXXXPIIPYDFTP 63 ++L+TPLVKK A KIGATD PN RKVH KIMPR P PY+ Sbjct: 38 SILITPLVKKLAFKIGATDKPNQRKVHQKIMPRLGGLAIYISFIAGLLILQPEAPYNMAI 97 Query: 64 REANFIKXXXXXXXXXXXXXXXDDRFELSAKVKLLGQIAAACIVVFGFGITVDFVNIPFN 123 + I DD E+SAKVKL GQ+AAA IVV G+ V+FVN+PF Sbjct: 98 ILGSLI---------IIATGVLDDMIEISAKVKLAGQLAAAAIVVIWGGVHVEFVNLPFG 148 Query: 124 NSYSSLE-SWIAIPLTIFWIVGVTNAVNLIDGLDGLAAGVSGIAIATIAVMAFLMGNTMV 182 LE ++IPLTI WIVG+TNA+NLIDGLDGLAAGVS IA+ TI+ MA +MG+ V Sbjct: 149 GM---LEFGMLSIPLTILWIVGITNAINLIDGLDGLAAGVSSIALITISGMAIIMGDPYV 205 Query: 183 AXXXXXXXXXXXXXXXXXXHPAKIFMGDTGSXXXXXXXXXXXXXXXKQIAVVSFITPLLI 242 HPAKIFMGDTG+ K + ++SFI P++I Sbjct: 206 VAIGSITLASTLGFLIYNFHPAKIFMGDTGALFLGYIISVLSLLGFKNVTMISFIVPVII 265 Query: 243 IGVPLSDTFFAIVRRKLQKKPIFAPDKGHLHHCLRELGFSHRQTVLIIYGIAGFFGILAV 302 +GVP+SDTFFAI+RR + KKP+ APDK HLHHCL LG+SHRQTV++IY +A FFG+ AV Sbjct: 266 LGVPISDTFFAIIRRIVTKKPLSAPDKSHLHHCLLRLGYSHRQTVILIYAMAAFFGLTAV 325 Query: 303 IQTSASLYEANWVTFVVICVMLFFLQIGAEITGVISKTKRPLIDFLLRMRVKANPER 359 I + A + W +FVVI V+L +++ AE G++ K RPL+ + +R +R Sbjct: 326 IFSQAKV----WGSFVVIGVLLLLIEVFAEKVGLMGKDHRPLLKVMRDIRYSTAKDR 378 >A2RH65.1 A2RH65_BACME TagO protein Length = 350 Score = 285 bits (728), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 156/352 (44%), Positives = 211/352 (59%), Gaps = 16/352 (4%) Query: 4 ALLLTPLVKKFAVKIGATDVPNARKVHTKIMPRXXXXXXXXXXXXXXXXXXPIIPYDFTP 63 ++L+TPLVKK A KIGATD PN RKVH KIMPR +I Y Sbjct: 13 SILITPLVKKLAFKIGATDKPNQRKVHQKIMPRLGGLAIFFSF---------LIGYLVLQ 63 Query: 64 REANFIKXXXXXXXXXXXXXXXDDRFELSAKVKLLGQIAAACIVVFGFGITVDFVNIPFN 123 ++ + DD ELSAK+KL GQ+ A IVV G+ +DF+N+PF Sbjct: 64 PDSKYALPILIGSIIIIITGVLDDMIELSAKIKLGGQLVATLIVVVYGGVQIDFINLPFG 123 Query: 124 NSYSSLE-SWIAIPLTIFWIVGVTNAVNLIDGLDGLAAGVSGIAIATIAVMAFLMGNTMV 182 LE ++IP+T+ WIVG+TNA+NLIDGLDGLAAGVS I + TI+ MA +MGN V Sbjct: 124 GK---LEFGMLSIPITVLWIVGITNAINLIDGLDGLAAGVSSIVLITISGMAIMMGNVFV 180 Query: 183 AXXXXXXXXXXXXXXXXXXHPAKIFMGDTGSXXXXXXXXXXXXXXXKQIAVVSFITPLLI 242 HPAKIFMGDTG+ K +AV+SFI P++I Sbjct: 181 TSMGFIVLGSTLGFLFYNFHPAKIFMGDTGALFLGYMISVLSLLGFKNVAVISFIVPVII 240 Query: 243 IGVPLSDTFFAIVRRKLQKKPIFAPDKGHLHHCLRELGFSHRQTVLIIYGIAGFFGILAV 302 +GVP+SDTFFAI+RR ++ +P+ APDK HLHHCL LG+SHRQTVLIIYG++ FG+ AV Sbjct: 241 LGVPISDTFFAIIRRIVKNQPLSAPDKSHLHHCLLRLGYSHRQTVLIIYGMSAIFGLAAV 300 Query: 303 IQTSASLYEANWVTFVVICVMLFFLQIGAEITGVISKTKRPLIDFLLRMRVK 354 I + + W +F+V+ ++L ++I E G++ KT RP+++ + +R+K Sbjct: 301 IFSKV---QTMWGSFLVLAILLVAIEIIVEKIGLVDKTYRPILNMVRGLRLK 349 >A4ISX0.1 A4ISX0_GEOTN Glycosyl transferase group 4 family protein Length = 354 Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 152/346 (43%), Positives = 202/346 (58%), Gaps = 15/346 (4%) Query: 7 LTPLVKKFAVKIGATDVPNARKVHTKIMPRXXXXXXXXXXXXXXXXXXPIIPYDFTPREA 66 +TPLVKK A +GATD PN RKVH KIMPR P + Sbjct: 17 ITPLVKKLAFIVGATDRPNQRKVHQKIMPRLGGLAIYIAFMVGVLVLDPDNAVEMHILLG 76 Query: 67 NFIKXXXXXXXXXXXXXXXDDRFELSAKVKLLGQIAAACIVVFGFGITVDFVNIPFNNSY 126 + I DD ELS KVKL GQ+ AA +VV GI V+++N+PF + Sbjct: 77 SAI---------IIITGMLDDLIELSPKVKLAGQLLAAFVVVVFGGIQVEYINLPFGSQL 127 Query: 127 SSLESWIAIPLTIFWIVGVTNAVNLIDGLDGLAAGVSGIAIATIAVMAFLMGNTMVAXXX 186 +IPLTI WIVG+TNA+NLIDGLDGLAAGVS IA+ TI+ MAFL G+ VA Sbjct: 128 HF--GVFSIPLTILWIVGITNAINLIDGLDGLAAGVSAIALITISWMAFLKGDLFVAGMS 185 Query: 187 XXXXXXXXXXXXXXXHPAKIFMGDTGSXXXXXXXXXXXXXXXKQIAVVSFITPLLIIGVP 246 HPAKIFMGDTG+ K + +SFI P++I+GVP Sbjct: 186 IILIGSILGFLVYNFHPAKIFMGDTGALFLGYMISVLSLLGFKNVTAISFIIPVIILGVP 245 Query: 247 LSDTFFAIVRRKLQKKPIFAPDKGHLHHCLRELGFSHRQTVLIIYGIAGFFGILAVIQTS 306 +SDTFFAI+RR ++++P+ APDK HLHHCL LG+SHRQTVLIIYG++ FG++AVI + Sbjct: 246 ISDTFFAIIRRLVKRQPLSAPDKSHLHHCLLRLGYSHRQTVLIIYGVSALFGLIAVILSK 305 Query: 307 ASLYEANWVTFVVICVMLFFLQIGAEITGVISKTKRPLIDFLLRMR 352 A A WV+ +++ V++ L++ AE G++ RP++ + +R Sbjct: 306 A----AAWVSLIILTVVVLALEVMAEKIGLVGHNYRPILRIVQGIR 347 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.328 0.143 0.426 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,656,390,209 Number of extensions: 56203864 Number of successful extensions: 182199 Number of sequences better than 1.0e-05: 1494 Number of HSP's gapped: 179122 Number of HSP's successfully gapped: 1498 Length of query: 363 Length of database: 3,060,696,203 Length adjustment: 137 Effective length of query: 226 Effective length of database: 1,770,017,148 Effective search space: 400023875448 Effective search space used: 400023875448 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 132 (55.5 bits)