BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0327.0007.p (215 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K7I5.1 B3K7I5_9BACI Beta-hydroxyacyl-(Acyl-carrier-protein) de... 198 3e-49 B1DED7.1 B1DED7_9BACL Beta-hydroxyacyl-(Acyl-carrier-protein) de... 194 3e-48 C0Z750.1 C0Z750_BREBN (3R)-hydroxymyristoyl-[acyl carrier protei... 166 1e-39 B6FVX4.1 B6FVX4_9CLOT Putative uncharacterized protein 156 1e-36 C2YI73.1 C2YI73_BACCE (3R)-hydroxymyristoyl-[acyl-carrier-protei... 154 3e-36 >B3K7I5.1 B3K7I5_9BACI Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabZ Length = 143 Score = 198 bits (503), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 104/140 (74%), Positives = 114/140 (81%) Query: 76 MLNINEIQEIIPHRPPFLLVDKITEIEMGKRAVGIKNVTVNEXXXXXXXXXXXXXXXXLI 135 MLNI +IQEIIPHRPPFLLVDKI EIE GKRAVGIKNVT+NE LI Sbjct: 1 MLNIKQIQEIIPHRPPFLLVDKIVEIEDGKRAVGIKNVTINEPFFVGHFPEYAVMPGVLI 60 Query: 136 TEALAQVGAVAILGVEANKGKIGFLAGLDGFRFRGQVVPGDTLVLEVEITRLKGSIGKGQ 195 EALAQVGAVAIL VE+N+GK+GFLAG+DGFRFRGQVVPGDTL LEVEI RLKG IGKG+ Sbjct: 61 VEALAQVGAVAILNVESNRGKLGFLAGIDGFRFRGQVVPGDTLRLEVEIIRLKGMIGKGK 120 Query: 196 ATAKVEGKVVASGEIMFALS 215 ATA V+G+VVA GEIMFAL+ Sbjct: 121 ATATVDGRVVAEGEIMFALA 140 >B1DED7.1 B1DED7_9BACL Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabZ Length = 142 Score = 194 bits (494), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 101/140 (72%), Positives = 115/140 (82%) Query: 76 MLNINEIQEIIPHRPPFLLVDKITEIEMGKRAVGIKNVTVNEXXXXXXXXXXXXXXXXLI 135 ML+IN+IQEIIPHRPPFLLVD+ITE+E G RAVGIKNVT+NE LI Sbjct: 1 MLDINQIQEIIPHRPPFLLVDRITEVEPGVRAVGIKNVTMNEPHFVGHFPGYPVMPGVLI 60 Query: 136 TEALAQVGAVAILGVEANKGKIGFLAGLDGFRFRGQVVPGDTLVLEVEITRLKGSIGKGQ 195 EALAQVG+VA+L VEAN+GK+GF AG+DGFRFRGQV PGDTL LEVEITRLKG IGKG+ Sbjct: 61 VEALAQVGSVAMLMVEANRGKLGFFAGIDGFRFRGQVKPGDTLELEVEITRLKGPIGKGK 120 Query: 196 ATAKVEGKVVASGEIMFALS 215 ATAKV+G+VVA GE+MFALS Sbjct: 121 ATAKVDGQVVAEGELMFALS 140 >C0Z750.1 C0Z750_BREBN (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase EC=4.2.1.- Length = 152 Score = 166 bits (420), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 87/139 (62%), Positives = 105/139 (75%) Query: 77 LNINEIQEIIPHRPPFLLVDKITEIEMGKRAVGIKNVTVNEXXXXXXXXXXXXXXXXLIT 136 L+I +IQEIIPHR PFLL+DKI E+E+GKRAVGIKNVTVNE LI Sbjct: 7 LDIMQIQEIIPHRYPFLLIDKIEELELGKRAVGIKNVTVNEPFFQGHFPGFPVMPGVLIV 66 Query: 137 EALAQVGAVAILGVEANKGKIGFLAGLDGFRFRGQVVPGDTLVLEVEITRLKGSIGKGQA 196 EALAQVGAVA+L +E ++GKIG AG+D FRF+ QV PGDTLVLEVE+TR++G++GKG Sbjct: 67 EALAQVGAVAMLSMEEHQGKIGLFAGIDEFRFKDQVKPGDTLVLEVELTRVRGTVGKGHG 126 Query: 197 TAKVEGKVVASGEIMFALS 215 A V GKVVA G +MFAL+ Sbjct: 127 RALVNGKVVAEGGLMFALT 145 >B6FVX4.1 B6FVX4_9CLOT Putative uncharacterized protein Length = 142 Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 81/140 (57%), Positives = 101/140 (72%) Query: 76 MLNINEIQEIIPHRPPFLLVDKITEIEMGKRAVGIKNVTVNEXXXXXXXXXXXXXXXXLI 135 MLNI++I+EIIPHR PFLLVDKI E+E GKRAVGIKNVT NE LI Sbjct: 1 MLNIDQIKEIIPHRYPFLLVDKIVELEAGKRAVGIKNVTANEPFFQGHFPEYPLMPGVLI 60 Query: 136 TEALAQVGAVAILGVEANKGKIGFLAGLDGFRFRGQVVPGDTLVLEVEITRLKGSIGKGQ 195 EA+AQVGAVA++ +E NKGK+G AG+D RF+ +V PGDTL +EVE+ LK +IGK Sbjct: 61 IEAMAQVGAVAMMSLEENKGKLGVFAGIDKVRFKREVRPGDTLTMEVEMKALKRNIGKAD 120 Query: 196 ATAKVEGKVVASGEIMFALS 215 A A V+G++V GE+MFAL+ Sbjct: 121 AAAYVDGELVCKGELMFALT 140 >C2YI73.1 C2YI73_BACCE (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase Length = 144 Score = 154 bits (390), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 81/139 (58%), Positives = 99/139 (71%) Query: 76 MLNINEIQEIIPHRPPFLLVDKITEIEMGKRAVGIKNVTVNEXXXXXXXXXXXXXXXXLI 135 MLNI +I+EIIPHR PFLLVDKI E++ GKRAVGIKNV+VNE LI Sbjct: 1 MLNIEQIKEIIPHRYPFLLVDKILEVDEGKRAVGIKNVSVNEEFFNGHFPDYAVMPGVLI 60 Query: 136 TEALAQVGAVAILGVEANKGKIGFLAGLDGFRFRGQVVPGDTLVLEVEITRLKGSIGKGQ 195 EALAQVGAVA+L E N+G++ F AG+D RF+ QV PGD L LEVE+TR++G IGKG+ Sbjct: 61 VEALAQVGAVAVLKKEENRGRLAFFAGIDNCRFKKQVRPGDQLRLEVEMTRVRGPIGKGK 120 Query: 196 ATAKVEGKVVASGEIMFAL 214 A A V+G+V EI FA+ Sbjct: 121 AIATVDGEVACEAEITFAI 139 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.140 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,096,399,024 Number of extensions: 39504916 Number of successful extensions: 86419 Number of sequences better than 1.0e-05: 1476 Number of HSP's gapped: 84755 Number of HSP's successfully gapped: 1478 Length of query: 215 Length of database: 3,060,696,203 Length adjustment: 130 Effective length of query: 85 Effective length of database: 1,835,964,253 Effective search space: 156056961505 Effective search space used: 156056961505 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 128 (53.9 bits)