BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0324.0002.p (259 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0ZKN0.1 C0ZKN0_BREBN Putative uncharacterized protein 136 2e-30 B7IZK6.1 B7IZK6_BACC2 F5/8 type C domain protein 95 7e-18 C3L3M7.1 C3L3M7_CLOB6 F5/8 type C domain protein 90 2e-16 B1QH58.1 B1QH58_CLOBO MTA/SAH nucleosidase EC=3.2.2.9 90 2e-16 B1QAJ8.1 B1QAJ8_CLOBO Putative uncharacterized protein 90 3e-16 >C0ZKN0.1 C0ZKN0_BREBN Putative uncharacterized protein Length = 286 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 67/152 (44%), Positives = 94/152 (61%), Gaps = 4/152 (2%) Query: 106 NDLVPTMTSNFAPCGQVSASTEFSPLNAAWTAFNDTIESSGRGWHTEKNITSGWLEYAFH 165 +DL+P MTSN P G SAS+ +S + + AF+DT S GW T + +GWL Y F Sbjct: 36 DDLIPKMTSNTEPNGIASASSYWSNNHLPFAAFDDT--DSAYGWGTVQGTVTGWLAYEFS 93 Query: 166 SPQVVRAYTLQTQNSPNNTVSVARAPKTWTFEAWNGQEWIVLDSQSNITNWVYSESKKFS 225 +PQ ++ YT++ + NN + PKTWTFE W+G +W++LD+Q NI+NW K+F Sbjct: 94 TPQKIQKYTIKPR--LNNIDGIRELPKTWTFEGWDGSKWVILDTQKNISNWAIGVKKEFY 151 Query: 226 FTNEKAYSKYRINITANNGSVEHIVIGEMQLL 257 F N Y KYRINI NNG + IGEM+++ Sbjct: 152 FDNPNNYIKYRINIAENNGYSNFVTIGEMEMM 183 >B7IZK6.1 B7IZK6_BACC2 F5/8 type C domain protein Length = 663 Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 59/159 (37%), Positives = 86/159 (54%), Gaps = 4/159 (2%) Query: 101 SSGEGN-DLVPTMTSNFAPCGQVSASTEFSPLNAAWTAFNDTIESSGRGWHTEKNITSGW 159 S GE N +L+P MTSN AP G VSAS E A+ AFN T S W E ++ W Sbjct: 91 SGGESNVNLIPVMTSNTAPSGVVSASAESLSNGPAYRAFNGTTNSWEDRWFVEDFVSDTW 150 Query: 160 LEYAFHSPQVVRAYTLQTQNSPNNTVSVARAPKTWTFEAWN-GQEWIVLDSQSNITNWVY 218 L+Y + SP VV +Y + +N + RAP+ + F N G+ W ++ ++ I+ W Sbjct: 151 LQYKYDSPVVVTSYEIHPVFG-DNGLEETRAPRDFKFHGSNDGETWNMIGLEAAISGWKA 209 Query: 219 SESKKFSFTNEKAYSKYRINITANNGSVEHIVIGEMQLL 257 K+F N AY YR+ + ANNG + + IGE+++L Sbjct: 210 GNPKRFFTQNRTAYQYYRLTVLANNGD-KSLEIGELKML 247 >C3L3M7.1 C3L3M7_CLOB6 F5/8 type C domain protein Length = 274 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 58/153 (37%), Positives = 84/153 (54%), Gaps = 9/153 (5%) Query: 107 DLVPTMTSNFAPCGQVSASTEFSPLNAAWTAFNDTIESSGRGWHTEKNITSGWLEYAFHS 166 +L+P MTSN P G+ AST + AW AFNDT W T + WL Y F Sbjct: 8 NLIPKMTSNTTPIGKCKASTTYGTTWEAWKAFNDTCVDGDDCWATTN--KNSWLSYEFLE 65 Query: 167 PQVVRAYTLQTQNSPN-NTVSVARAPKTWTFE-AWNGQEWIVLDSQSNITNWVYSESKKF 224 P ++ Y++ +NS + NT S PK W+FE + NG +W LD++ +ITNW + +F Sbjct: 66 PIIINKYSICPRNSGDFNTAS----PKNWSFEGSNNGLDWEKLDTRKDITNWQLMRNNEF 121 Query: 225 SFTNEKAYSKYRINITANNGSVEHIVIGEMQLL 257 F N Y Y+INI NNG ++ IG++ ++ Sbjct: 122 IFNNNIPYKIYKINIFDNNGG-HYLCIGKLCMM 153 >B1QH58.1 B1QH58_CLOBO MTA/SAH nucleosidase EC=3.2.2.9 Length = 274 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 58/153 (37%), Positives = 84/153 (54%), Gaps = 9/153 (5%) Query: 107 DLVPTMTSNFAPCGQVSASTEFSPLNAAWTAFNDTIESSGRGWHTEKNITSGWLEYAFHS 166 +L+P MTSN P G+ AST + AW AFNDT W T + WL Y F Sbjct: 8 NLIPKMTSNTTPIGKCKASTTYGTTWEAWKAFNDTCVDGDDCWATTN--KNSWLSYEFLE 65 Query: 167 PQVVRAYTLQTQNSPN-NTVSVARAPKTWTFE-AWNGQEWIVLDSQSNITNWVYSESKKF 224 P ++ Y++ +NS + NT S PK W+FE + NG +W LD++ +ITNW + +F Sbjct: 66 PIIINKYSICPRNSGDFNTAS----PKNWSFEGSNNGLDWEKLDTRKDITNWQLMRNNEF 121 Query: 225 SFTNEKAYSKYRINITANNGSVEHIVIGEMQLL 257 F N Y Y+INI NNG ++ IG++ ++ Sbjct: 122 IFNNNIPYKIYKINIFDNNGG-HYLCIGKLCMM 153 >B1QAJ8.1 B1QAJ8_CLOBO Putative uncharacterized protein Length = 274 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 58/153 (37%), Positives = 84/153 (54%), Gaps = 9/153 (5%) Query: 107 DLVPTMTSNFAPCGQVSASTEFSPLNAAWTAFNDTIESSGRGWHTEKNITSGWLEYAFHS 166 +L+P MTSN P G+ AST + AW AFNDT W T + WL Y F Sbjct: 8 NLIPKMTSNTTPIGKCKASTTYGTTWEAWKAFNDTCVDGDDCWATTN--KNSWLSYEFLE 65 Query: 167 PQVVRAYTLQTQNSPN-NTVSVARAPKTWTFE-AWNGQEWIVLDSQSNITNWVYSESKKF 224 P ++ Y++ +NS + NT S PK W+FE + NG +W LD++ +ITNW + +F Sbjct: 66 PIIINKYSICPRNSGDFNTAS----PKNWSFEGSNNGLDWGKLDTRKDITNWQLMRNNEF 121 Query: 225 SFTNEKAYSKYRINITANNGSVEHIVIGEMQLL 257 F N Y Y+INI NNG ++ IG++ ++ Sbjct: 122 IFNNNIPYKIYKINIFDNNGGY-YLCIGKLCMM 153 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.313 0.128 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,612,955,901 Number of extensions: 67081940 Number of successful extensions: 106774 Number of sequences better than 1.0e-05: 24 Number of HSP's gapped: 106776 Number of HSP's successfully gapped: 24 Length of query: 259 Length of database: 3,060,696,203 Length adjustment: 133 Effective length of query: 126 Effective length of database: 1,807,701,208 Effective search space: 227770352208 Effective search space used: 227770352208 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 130 (54.7 bits)