BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0320.0008.p (66 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q9K916.1 Q9K916_BACHD BH2835 protein 79 1e-13 B1SF67.1 B1SF67_9STRE Putative uncharacterized protein 78 2e-13 C0YNP4.1 C0YNP4_9FLAO Hydrolase 78 2e-13 A2TR83.1 A2TR83_9FLAO Hydrolase, HD family protein 76 1e-12 Q838Z9.1 Q838Z9_ENTFA HD domain protein 75 2e-12 >Q9K916.1 Q9K916_BACHD BH2835 protein Length = 215 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 36/54 (66%), Positives = 44/54 (81%), Gaps = 1/54 (1%) Query: 3 KEYRDYSKGTAVNHFYEKLLKLKDLMNTPYGRKLAEERHAFMESFLEQFYKEWN 56 +EYR + K TA+NHFYEKL KLKDLMNT G++LA+ERH FME F+E+F EWN Sbjct: 160 EEYR-HGKSTAINHFYEKLFKLKDLMNTETGKQLAKERHVFMEQFIERFLSEWN 212 >B1SF67.1 B1SF67_9STRE Putative uncharacterized protein Length = 216 Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 36/54 (66%), Positives = 45/54 (83%), Gaps = 1/54 (1%) Query: 3 KEYRDYSKGTAVNHFYEKLLKLKDLMNTPYGRKLAEERHAFMESFLEQFYKEWN 56 +EYR+ SK TA+ HFYEKLLKLKDLMNT + RK+AE RHA +E FL++FY EW+ Sbjct: 161 EEYRN-SKDTAIMHFYEKLLKLKDLMNTSHARKMAEHRHAVLEEFLKEFYAEWD 213 >C0YNP4.1 C0YNP4_9FLAO Hydrolase Length = 214 Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 36/56 (64%), Positives = 44/56 (78%) Query: 1 LQKEYRDYSKGTAVNHFYEKLLKLKDLMNTPYGRKLAEERHAFMESFLEQFYKEWN 56 + KE S GT +NHFYEKLL LKD+MNT G+K+AEERH +M +FL+QFYKEWN Sbjct: 157 MSKEEYKKSDGTTINHFYEKLLLLKDMMNTEKGKKMAEERHDYMLNFLDQFYKEWN 212 >A2TR83.1 A2TR83_9FLAO Hydrolase, HD family protein Length = 218 Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 38/62 (61%), Positives = 47/62 (75%), Gaps = 3/62 (4%) Query: 1 LQKEYRDYSKGTA--VNHFYEKLLKLKDLMNTPYGRKLAEERHAFMESFLEQFYKEWNQG 58 L +Y K TA +NHFYEKLL LKD MNT G+K+AE+RHA+ME FLEQFY+EW +G Sbjct: 158 LDMTVDEYKKSTAPTINHFYEKLLLLKDRMNTKTGKKIAEKRHAYMEGFLEQFYREW-EG 216 Query: 59 SR 60 S+ Sbjct: 217 SK 218 >Q838Z9.1 Q838Z9_ENTFA HD domain protein Length = 224 Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 36/55 (65%), Positives = 46/55 (83%), Gaps = 1/55 (1%) Query: 2 QKEYRDYSKGTAVNHFYEKLLKLKDLMNTPYGRKLAEERHAFMESFLEQFYKEWN 56 Q+EYR+ + TA+ HFYEKLLKLK+ MNT YGR LAE+RH FME +LE+FY+EW+ Sbjct: 168 QEEYRN-GEDTAIMHFYEKLLKLKEQMNTNYGRLLAEKRHQFMELYLEEFYQEWD 221 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.316 0.133 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 426,947,483 Number of extensions: 13373555 Number of successful extensions: 31814 Number of sequences better than 1.0e-05: 238 Number of HSP's gapped: 31817 Number of HSP's successfully gapped: 238 Length of query: 66 Length of database: 3,060,696,203 Length adjustment: 38 Effective length of query: 28 Effective length of database: 2,702,697,633 Effective search space: 75675533724 Effective search space used: 75675533724 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 125 (52.8 bits)