BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0320.0005.p (631 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q97J79.1 Q97J79_CLOAB PTS system, beta-glucosides-specific IIABC... 895 0.0 A6LYH2.1 A6LYH2_CLOB8 PTS system, beta-glucoside-specific IIABC ... 872 0.0 B8DAN3.1 B8DAN3_LISMH Pts system beta-glucoside-specific eiibca ... 800 0.0 A0AEL6.1 A0AEL6_LISW6 Complete genome EC=2.7.1.69 798 0.0 Q8YAT6.1 Q8YAT6_LISMO Lmo0027 protein 796 0.0 >Q97J79.1 Q97J79_CLOAB PTS system, beta-glucosides-specific IIABC component Length = 628 Score = 895 bits (2313), Expect = 0.0, Method: Compositional matrix adjust. Identities = 439/631 (69%), Positives = 525/631 (83%), Gaps = 3/631 (0%) Query: 1 MKYEKLAKDIISNVGGKENVNSLTHCITRLRFKLNDESKANTEILKNMDGVVTVVQSGGQ 60 MKYEKLAKDII NVGGKENVNSLTHCITRLRFKL DESKANT++LKNMDGVVTV++SGGQ Sbjct: 1 MKYEKLAKDIIENVGGKENVNSLTHCITRLRFKLKDESKANTDVLKNMDGVVTVIKSGGQ 60 Query: 61 YQVVIGNHVPEVYEDVAAIGGFQAASAEASDEKVGLFNKFIDMISGVFTPTLGVLSATGM 120 YQVVIGNHVP+VY DV AIGGF ++S E + EK LFN FID ISGVFTPTLGVL+ATGM Sbjct: 61 YQVVIGNHVPDVYADVVAIGGFSSSSEEGTKEKTNLFNAFIDTISGVFTPTLGVLAATGM 120 Query: 121 IKGFAALFLSLGVLTNTSGTYQILNAIGDCLFYFFPIFLGYTSAKKFNTHIFIGMAIGAT 180 IKGF A+F++ G LT TSGTY ILNA+GDCLFYFFPIFLGY++AKKF + FIGMAIGA+ Sbjct: 121 IKGFNAMFIAFGWLTKTSGTYNILNAVGDCLFYFFPIFLGYSAAKKFKGNHFIGMAIGAS 180 Query: 181 LVYPTFSSITASGKPLYTLFSGTVIESPVYLTFLGIPVILMSYASSVIPIILSTYVGGKI 240 LVYPT S++ +GKPLYTLF GT+ SPVY+TFLGIPVILMSY+S+VIPIIL++YVG K+ Sbjct: 181 LVYPTLSTLM-TGKPLYTLFQGTIFASPVYVTFLGIPVILMSYSSTVIPIILASYVGVKV 239 Query: 241 EGFFKKIIPSVVRTFLVPFCTLLVIVPLALIFIGPVATWAGQLLGAGTLFIYNLSPVIAG 300 E F KIIP VV+TFLVPFCTLLV+VPL+LI IGP++TWAG+LLGAGTL IYNLSP++AG Sbjct: 240 EKAFAKIIPDVVKTFLVPFCTLLVMVPLSLIVIGPISTWAGKLLGAGTLAIYNLSPILAG 299 Query: 301 VLLGGFWQVFVIFGLHWGFVPIAINNMTVFGYDTILAGVFGASFAQTGVVLAILLRTKNI 360 + +G FWQVFVIFGLHWG VPIA+NN++V YD ILAG GASFAQTGVVLAIL++TKN+ Sbjct: 300 LFIGAFWQVFVIFGLHWGLVPIAMNNLSVLHYDPILAGTLGASFAQTGVVLAILIKTKNV 359 Query: 361 KLKSLSVPAVISGIFGVTEPAIYGITLPRKKPFILSCXXXXXXXXXXXXXXXXXXXXXXL 420 KLK +++PA ISGIFGVTEPAIYG+TLPRKKPFI+SC L Sbjct: 360 KLKGIALPAFISGIFGVTEPAIYGVTLPRKKPFIISCIGAAIGGGITGFMGTKLWMMGGL 419 Query: 421 GIFGIPSYISPEGMDRGFMGAVIGISVSFVLGFLLMYFGGFKDDEVKQDNKEPRSGDPLI 480 GIF IPSYI +GMDRGF GAV+ + +SFV+GFL+M+F GFKD+EVKQ+ + + + L+ Sbjct: 420 GIFAIPSYIGAKGMDRGFYGAVMSVVISFVVGFLIMFFAGFKDEEVKQETTKKK--NELV 477 Query: 481 KQETVSSPLKGEVIALSDVKDEAFSTGALGKGIAIEPAEGKVYSPVDGVLTSLFASGHAI 540 KQET+ SPLKG++ LS+VKDEAFSTG+LGKGIAIEP EGK+ SPVDGVL +LF +GHA+ Sbjct: 478 KQETLVSPLKGKIKTLSEVKDEAFSTGSLGKGIAIEPEEGKLVSPVDGVLATLFPTGHAV 537 Query: 541 GITSEHGVDILIHVGKDTVKLKGKHFTPKVKQGDTVKKGDLLMEFDMEAIRAAGYILTTP 600 GI S+ G +ILIHVG DTV+L+GK+F +KQGD VK GD ++EFD+ I+ AGY LTTP Sbjct: 538 GIISDKGTEILIHVGMDTVQLEGKYFKTILKQGDHVKAGDTILEFDIPKIKKAGYTLTTP 597 Query: 601 VIVSNSGNYLDVIETGKKNIGYKEDLLTVMI 631 V+V+NS +YLDVIET K + K+ LLTVM+ Sbjct: 598 VVVTNSESYLDVIETDKIKVERKDQLLTVML 628 >A6LYH2.1 A6LYH2_CLOB8 PTS system, beta-glucoside-specific IIABC subunit Length = 634 Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust. Identities = 438/634 (69%), Positives = 514/634 (81%), Gaps = 3/634 (0%) Query: 1 MKYEKLAKDIISNVGGKENVNSLTHCITRLRFKLNDESKANTEILKNMDGVVTVVQSGGQ 60 MKYE+LAKDII NVGGKENVNSLTHCITRLRFKL DESKANTE+LKNMDGVVTVV+SGGQ Sbjct: 1 MKYEQLAKDIIKNVGGKENVNSLTHCITRLRFKLKDESKANTEVLKNMDGVVTVVKSGGQ 60 Query: 61 YQVVIGNHVPEVYEDVAAIGGFQA-ASAEASDEKVGLFNKFIDMISGVFTPTLGVLSATG 119 YQVVIGNHVP+V+ DV AIGGF+ AS + S+EK+ FN+FID +SGVFTP LGVL+ATG Sbjct: 61 YQVVIGNHVPDVFADVVAIGGFKTGASEDVSEEKMSPFNRFIDTVSGVFTPILGVLAATG 120 Query: 120 MIKGFAALFLSLGVLTNTSGTYQILNAIGDCLFYFFPIFLGYTSAKKFNTHIFIGMAIGA 179 MIKGF ALF++L +L T GTYQILNA GDCLF FFPIFLGYT+A KF + FIGMAIGA Sbjct: 121 MIKGFNALFIALHILNTTDGTYQILNATGDCLFNFFPIFLGYTAANKFKVNKFIGMAIGA 180 Query: 180 TLVYPTFSSITAS-GKPLYTLFSGTVIESPVYLTFLGIPVILMSYASSVIPIILSTYVGG 238 LVYP+ + +TA +PLYTLF+G++IESPVY+TFLGIPVILMSY SSVIPIIL+TYVGG Sbjct: 181 ALVYPSLAGLTAPPAQPLYTLFAGSIIESPVYITFLGIPVILMSYTSSVIPIILATYVGG 240 Query: 239 KIEGFFKKIIPSVVRTFLVPFCTLLVIVPLALIFIGPVATWAGQLLGAGTLFIYNLSPVI 298 KIE FKK+IP VV+TFLVPFCTLLVIVPL I IGP+ATWAG+LLGA TL IY+LSPV+ Sbjct: 241 KIENGFKKVIPDVVKTFLVPFCTLLVIVPLTFIVIGPIATWAGKLLGALTLSIYSLSPVV 300 Query: 299 AGVLLGGFWQVFVIFGLHWGFVPIAINNMTVFGYDTILAGVFGASFAQTGVVLAILLRTK 358 AG+ +G FWQVFVIFGLHWGF+PIAINN+TV D IL +F ASFAQTGVV AILL+TK Sbjct: 301 AGLFMGAFWQVFVIFGLHWGFIPIAINNLTVLHQDPILGLIFAASFAQTGVVGAILLKTK 360 Query: 359 NIKLKSLSVPAVISGIFGVTEPAIYGITLPRKKPFILSCXXXXXXXXXXXXXXXXXXXXX 418 N KLK L +PA ISGIFGVTEPAIYGITLPRKKPFILSC Sbjct: 361 NSKLKGLCIPAFISGIFGVTEPAIYGITLPRKKPFILSCIGGSLGGAILGFMGSNVYMIG 420 Query: 419 XLGIFGIPSYISPEGMDRGFMGAVIGISVSFVLGFLLMYFGGFKDD-EVKQDNKEPRSGD 477 LGIFGIP YI P GMDRGF G++I + F++GF+LM F +D+ + + + ++ Sbjct: 421 GLGIFGIPGYIGPNGMDRGFYGSIIAMIAGFLIGFILMLFTKLEDNTDSGKSKNDLKTVQ 480 Query: 478 PLIKQETVSSPLKGEVIALSDVKDEAFSTGALGKGIAIEPAEGKVYSPVDGVLTSLFASG 537 PL++QE + SPLKGEV LS+VKDEAFS GALGKGIAIEP EGK+ +PVDGVLT+ F +G Sbjct: 481 PLVRQEILVSPLKGEVKPLSEVKDEAFSKGALGKGIAIEPKEGKILAPVDGVLTTFFPTG 540 Query: 538 HAIGITSEHGVDILIHVGKDTVKLKGKHFTPKVKQGDTVKKGDLLMEFDMEAIRAAGYIL 597 HAIGITS +G +ILIHVG DTV+L+GK+F PK KQGDTVK G +L+EFD+++I GY L Sbjct: 541 HAIGITSANGAEILIHVGMDTVQLEGKYFYPKAKQGDTVKAGQVLLEFDIDSIEKEGYSL 600 Query: 598 TTPVIVSNSGNYLDVIETGKKNIGYKEDLLTVMI 631 TPV+++NS +YLDVIET +K I YKE+LLTVMI Sbjct: 601 ITPVVITNSDSYLDVIETDRKIIDYKEELLTVMI 634 >B8DAN3.1 B8DAN3_LISMH Pts system beta-glucoside-specific eiibca component (Eiibca-bgl) (Eii-bgl) EC=2.7.1.69 Length = 633 Score = 800 bits (2066), Expect = 0.0, Method: Compositional matrix adjust. Identities = 393/634 (61%), Positives = 497/634 (78%), Gaps = 4/634 (0%) Query: 1 MKYEKLAKDIISNVGGKENVNSLTHCITRLRFKLNDESKANTEILKNMDGVVTVVQSGGQ 60 MKYE+LAKDI+ NVGGKEN+NS+ HCITRLRFKL DE+ ANT+ ++ +DGV++V++SGGQ Sbjct: 1 MKYEQLAKDILKNVGGKENINSVFHCITRLRFKLKDENSANTKEIEKLDGVISVIKSGGQ 60 Query: 61 YQVVIGNHVPEVYEDVAAIGGFQAASAEASDEKVG-LFNKFIDMISGVFTPTLGVLSATG 119 YQVVIGNHVP+V++ V +GG A +++ G +FN+FIDMISGVFTP LGVL+ATG Sbjct: 61 YQVVIGNHVPDVFKAVLEVGGISAEGDDSNAPASGNIFNRFIDMISGVFTPVLGVLAATG 120 Query: 120 MIKGFAALFLSLGVLTNTSGTYQILNAIGDCLFYFFPIFLGYTSAKKFNTHIFIGMAIGA 179 MIKGF A+F + G +T TSGTYQ+L AIGDCLFYFFPIFLGYT+ KKF +IFIGMAIGA Sbjct: 121 MIKGFTAMFAAFGWITVTSGTYQLLYAIGDCLFYFFPIFLGYTAMKKFGGNIFIGMAIGA 180 Query: 180 TLVYPTFSSITASGKPLYTLFSGTVIESPVYLTFLGIPVILMSYASSVIPIILSTYVGGK 239 +LVYPT + I+A G P+YTLF GT+ ESP+++TFLGIPVILMSYASSVIPIIL+TY G K Sbjct: 181 SLVYPTLAGISA-GDPIYTLFQGTIFESPIHVTFLGIPVILMSYASSVIPIILATYFGSK 239 Query: 240 IEGFFKKIIPSVVRTFLVPFCTLLVIVPLALIFIGPVATWAGQLLGAGTLFIYNLSPVIA 299 +E FKKIIP V++TF+VPFCTLLV+VPL + IGP+ATWAGQLLGAGT++IYNLSPV+A Sbjct: 240 VEKGFKKIIPDVIKTFVVPFCTLLVVVPLTFLVIGPIATWAGQLLGAGTIWIYNLSPVVA 299 Query: 300 GVLLGGFWQVFVIFGLHWGFVPIAINNMTVFGYDTILAGVFGASFAQTGVVLAILLRTKN 359 G++LGGFWQVFVIFGLHWG +P+AINN+T G D +LA +FGASFAQ G VLA+ +TKN Sbjct: 300 GLILGGFWQVFVIFGLHWGLIPVAINNLTTLGADPVLAMMFGASFAQIGAVLAVFFKTKN 359 Query: 360 IKLKSLSVPAVISGIFGVTEPAIYGITLPRKKPFILSCXXXXXXXXXXXXXXXXXXXXXX 419 KLKSLS+PA ISGIFGVTEPAIYG+TLP KKPFI+SC Sbjct: 360 TKLKSLSIPAFISGIFGVTEPAIYGVTLPLKKPFIMSCIAGAIGGGIIGFASAKVYIMGG 419 Query: 420 LGIFGIPSYISP-EGMDRGFMGAVIGISVSFVLGFLLMYFGGFKDD-EVKQDNKEPRSGD 477 LGIFG+P++ P G+ F VI I +SF+LGF+L Y GFKD E + G+ Sbjct: 420 LGIFGLPNFFQPGSGITSAFWWVVIAIVISFILGFILTYVAGFKDPAEAVVEPSNTVEGE 479 Query: 478 PLIKQETVSSPLKGEVIALSDVKDEAFSTGALGKGIAIEPAEGKVYSPVDGVLTSLFASG 537 LI++ET+ +P+ GE++ L+DVKDEAFS+GALGKG+AI P G+V +P G +T++F +G Sbjct: 480 TLIERETIPAPVVGEIVTLADVKDEAFSSGALGKGVAIIPTVGRVVAPAAGTVTTIFPTG 539 Query: 538 HAIGITSEHGVDILIHVGKDTVKLKGKHFTPKVKQGDTVKKGDLLMEFDMEAIRAAGYIL 597 HAIGIT++ G ++LIH+G DTV+L+GK FT VKQGD ++KG LL EFD+E I+AAGY + Sbjct: 540 HAIGITTKDGAEVLIHIGMDTVQLEGKFFTAHVKQGDVIEKGQLLTEFDIEGIKAAGYDV 599 Query: 598 TTPVIVSNSGNYLDVIETGKKNIGYKEDLLTVMI 631 TTPV+V+NS YLDV+ T K +E L+T++I Sbjct: 600 TTPVVVTNSNQYLDVMITDAKEAKLEERLITLVI 633 >A0AEL6.1 A0AEL6_LISW6 Complete genome EC=2.7.1.69 Length = 634 Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust. Identities = 393/635 (61%), Positives = 496/635 (78%), Gaps = 5/635 (0%) Query: 1 MKYEKLAKDIISNVGGKENVNSLTHCITRLRFKLNDESKANTEILKNMDGVVTVVQSGGQ 60 MKYE+LAKDI+ NVGGKEN+NS+ HCITRLRFKL DE+ ANT+ ++ +DGV++V++SGGQ Sbjct: 1 MKYEQLAKDILKNVGGKENINSVFHCITRLRFKLKDENIANTKEIEKLDGVISVIKSGGQ 60 Query: 61 YQVVIGNHVPEVYEDVAAIGGFQAASAEASDEKV--GLFNKFIDMISGVFTPTLGVLSAT 118 YQVVIGNHVP+V++ V +GG A E S +FN+FIDMISGVFTP LGVL+AT Sbjct: 61 YQVVIGNHVPDVFKAVLEVGGISAEGDEGSSAPATGNIFNRFIDMISGVFTPVLGVLAAT 120 Query: 119 GMIKGFAALFLSLGVLTNTSGTYQILNAIGDCLFYFFPIFLGYTSAKKFNTHIFIGMAIG 178 GMIKGFAA+FL+ G LT TSGTY +L AIGDCLFYFFPIFLGYT+ KKF ++FIGMAIG Sbjct: 121 GMIKGFAAMFLAFGWLTETSGTYILLYAIGDCLFYFFPIFLGYTAMKKFGGNVFIGMAIG 180 Query: 179 ATLVYPTFSSITASGKPLYTLFSGTVIESPVYLTFLGIPVILMSYASSVIPIILSTYVGG 238 A LVYPT + I+A GKP++TLF+GTV ESP+++TFLGIPVILM+YASSVIPIIL+TY G Sbjct: 181 AALVYPTLAGISA-GKPIFTLFAGTVFESPIHITFLGIPVILMNYASSVIPIILATYFGS 239 Query: 239 KIEGFFKKIIPSVVRTFLVPFCTLLVIVPLALIFIGPVATWAGQLLGAGTLFIYNLSPVI 298 K+E FKKIIP V++TF+VPFCTLLV+VP+ + IGP+ATWAGQLLGAGT+++YNLSPVI Sbjct: 240 KVEKGFKKIIPDVIKTFVVPFCTLLVVVPITFLLIGPIATWAGQLLGAGTIWVYNLSPVI 299 Query: 299 AGVLLGGFWQVFVIFGLHWGFVPIAINNMTVFGYDTILAGVFGASFAQTGVVLAILLRTK 358 AG++LGGFWQVFVIFGLHWG VP+AINN+ +D ILA FGASFAQ G VLA+ +T+ Sbjct: 300 AGLILGGFWQVFVIFGLHWGLVPVAINNLASLHHDPILAMTFGASFAQIGAVLAVFFKTR 359 Query: 359 NIKLKSLSVPAVISGIFGVTEPAIYGITLPRKKPFILSCXXXXXXXXXXXXXXXXXXXXX 418 N K+K+LS+PA ISGIFGVTEPAIYG+TLP KKPFI+SC Sbjct: 360 NTKIKALSIPAFISGIFGVTEPAIYGVTLPLKKPFIMSCIAGGIGGGIIGFAGSQTYIMG 419 Query: 419 XLGIFGIPSYISP-EGMDRGFMGAVIGISVSFVLGFLLMYFGGFKDD-EVKQDNKEPRSG 476 LGIFG+P++ P EG+ F VI I +SF+LGF+L Y GFKD E + G Sbjct: 420 GLGIFGLPNFFKPGEGITGAFWWVVIAIVISFILGFILTYVVGFKDPAEAVVEESNTVEG 479 Query: 477 DPLIKQETVSSPLKGEVIALSDVKDEAFSTGALGKGIAIEPAEGKVYSPVDGVLTSLFAS 536 + LI++ET+ +P+ GE++ L+DVKDEAFS+GALGKG+AI P+ G+V +P G +T++F + Sbjct: 480 ETLIERETIPAPVVGEIVTLADVKDEAFSSGALGKGVAIIPSVGRVVAPAAGTVTTIFPT 539 Query: 537 GHAIGITSEHGVDILIHVGKDTVKLKGKHFTPKVKQGDTVKKGDLLMEFDMEAIRAAGYI 596 GHAIGIT+ G ++LIH+G DTV+L+GK FT VKQGDT+ KG LL EFD+E I+AAGY Sbjct: 540 GHAIGITTNDGAEVLIHIGMDTVQLEGKFFTAHVKQGDTITKGQLLTEFDIEGIKAAGYD 599 Query: 597 LTTPVIVSNSGNYLDVIETGKKNIGYKEDLLTVMI 631 +TTPV+V+NS YLDV+ T K +E L+T++I Sbjct: 600 VTTPVVVTNSNQYLDVMITDAKEAKLEERLITLVI 634 >Q8YAT6.1 Q8YAT6_LISMO Lmo0027 protein Length = 634 Score = 796 bits (2055), Expect = 0.0, Method: Compositional matrix adjust. Identities = 392/635 (61%), Positives = 497/635 (78%), Gaps = 5/635 (0%) Query: 1 MKYEKLAKDIISNVGGKENVNSLTHCITRLRFKLNDESKANTEILKNMDGVVTVVQSGGQ 60 MKYE+LAKDI+ NVGGKEN+NS+ HCITRLRFKL DE+ ANT+ ++ +DGV++V++SGGQ Sbjct: 1 MKYEQLAKDILKNVGGKENINSVFHCITRLRFKLKDENIANTKEIEKLDGVISVIKSGGQ 60 Query: 61 YQVVIGNHVPEVYEDVAAIGGFQAASAEASDEKV--GLFNKFIDMISGVFTPTLGVLSAT 118 YQVVIGNHVP+V++ V +GG A E S +FN+FIDMISGVFTP LGVL+AT Sbjct: 61 YQVVIGNHVPDVFKAVLEVGGISAEGDEGSSAPATGNIFNRFIDMISGVFTPVLGVLAAT 120 Query: 119 GMIKGFAALFLSLGVLTNTSGTYQILNAIGDCLFYFFPIFLGYTSAKKFNTHIFIGMAIG 178 GMIKGF A+F++ G +T TSGTYQ+L AIGDCLFYFFPIFLGYT+ KKF +IFIGMAIG Sbjct: 121 GMIKGFTAMFVAFGWITVTSGTYQLLYAIGDCLFYFFPIFLGYTAMKKFGGNIFIGMAIG 180 Query: 179 ATLVYPTFSSITASGKPLYTLFSGTVIESPVYLTFLGIPVILMSYASSVIPIILSTYVGG 238 LVYPT + ITA G PLYTLF+GT+ ESP+++TFLGIPVILMSYASSVIPII++TY G Sbjct: 181 GALVYPTLAGITA-GDPLYTLFAGTIFESPIHVTFLGIPVILMSYASSVIPIIVATYFGS 239 Query: 239 KIEGFFKKIIPSVVRTFLVPFCTLLVIVPLALIFIGPVATWAGQLLGAGTLFIYNLSPVI 298 K+E FKKIIP V++TF+VPFCTLL++VP+ I IGP+ATWAGQLLGAGT+++YNLSP+I Sbjct: 240 KVEKGFKKIIPDVIKTFVVPFCTLLIVVPITFIVIGPIATWAGQLLGAGTIWVYNLSPII 299 Query: 299 AGVLLGGFWQVFVIFGLHWGFVPIAINNMTVFGYDTILAGVFGASFAQTGVVLAILLRTK 358 AG++LGGFWQVFVIFGLHWG VP+AINN+TV G+D ILA FGASFAQ G VLA+ +++ Sbjct: 300 AGLILGGFWQVFVIFGLHWGLVPVAINNLTVLGHDPILAMTFGASFAQIGAVLAVFFKSR 359 Query: 359 NIKLKSLSVPAVISGIFGVTEPAIYGITLPRKKPFILSCXXXXXXXXXXXXXXXXXXXXX 418 N K+KSLS+PA ISGIFGVTEPAIYG+TLP KKPFI+SC Sbjct: 360 NKKIKSLSIPAFISGIFGVTEPAIYGVTLPLKKPFIMSCIAGGIGGGIIGFAGSQTYIMG 419 Query: 419 XLGIFGIPSYISP-EGMDRGFMGAVIGISVSFVLGFLLMYFGGFKDD-EVKQDNKEPRSG 476 LGIFG+P++ P G+ F VI I +SF+LGF+L Y GFKD +V + G Sbjct: 420 GLGIFGLPNFFKPGSGISGEFWWVVIAIVISFILGFILTYVVGFKDPADVVVEQSNTVEG 479 Query: 477 DPLIKQETVSSPLKGEVIALSDVKDEAFSTGALGKGIAIEPAEGKVYSPVDGVLTSLFAS 536 + LI++ET+ +P+ GE++ L+DVKDEAFS+GALGKG+AI P G+V +P G +T++F + Sbjct: 480 ETLIERETIPAPVVGEIVTLADVKDEAFSSGALGKGVAIIPTVGRVVAPAAGTVTTIFPT 539 Query: 537 GHAIGITSEHGVDILIHVGKDTVKLKGKHFTPKVKQGDTVKKGDLLMEFDMEAIRAAGYI 596 GHAIGIT++ G ++LIH+G DTV+L+GK FT VKQGD ++KG LL EFD+E I+AAGY Sbjct: 540 GHAIGITTKDGAEVLIHIGMDTVQLEGKFFTAHVKQGDVIEKGQLLTEFDIEGIKAAGYD 599 Query: 597 LTTPVIVSNSGNYLDVIETGKKNIGYKEDLLTVMI 631 +TTPV+V+NS YLDV+ T K +E L+T++I Sbjct: 600 VTTPVVVTNSNQYLDVMITDAKEAKLEERLITLVI 634 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.322 0.142 0.413 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,648,850,631 Number of extensions: 162792211 Number of successful extensions: 502629 Number of sequences better than 1.0e-05: 3092 Number of HSP's gapped: 495613 Number of HSP's successfully gapped: 3239 Length of query: 631 Length of database: 3,060,696,203 Length adjustment: 142 Effective length of query: 489 Effective length of database: 1,722,912,073 Effective search space: 842504003697 Effective search space used: 842504003697 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 135 (56.6 bits)