BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0320.0002.p (419 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K3A9.1 B3K3A9_9BACI Pyridine nucleotide-disulphide oxidoreductase 647 0.0 B1D7W2.1 B1D7W2_9BACL Pyridine nucleotide-disulphide oxidoreductase 641 0.0 B3KF64.1 B3KF64_9BACI Pyridine nucleotide-disulphide oxidoreductase 625 e-177 A6M208.1 A6M208_CLOB8 Pyridine nucleotide-disulphide oxidoreductase 568 e-160 B1VSW2.1 B1VSW2_STRGG Putative uncharacterized protein 553 e-155 >B3K3A9.1 B3K3A9_9BACI Pyridine nucleotide-disulphide oxidoreductase Length = 751 Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust. Identities = 302/380 (79%), Positives = 336/380 (88%) Query: 32 VWVCGATAHGTNRYARETGIMGELFLENQYRNPEGNPYLWDLVVLEAVKAEANITLYLNT 91 VWVCGATAHG NRYARETGIMGE+F+ENQYRNP+GNPYLWDL+VLE V+AE NITL+LNT Sbjct: 52 VWVCGATAHGINRYARETGIMGEMFVENQYRNPDGNPYLWDLIVLETVRAEPNITLFLNT 111 Query: 92 DVHEVQAEGPDDDRTITAVVGWMMASERRITFKSSMYLDCTGDGLIGFLAGAKFSLGREA 151 DVHEV+A+G D R I +V GWMM SERRI F+S ++LDCTGDGL+GFLAGAK+ LGREA Sbjct: 112 DVHEVEADGDSDARQIRSVTGWMMGSERRIRFESPVFLDCTGDGLVGFLAGAKYRLGREA 171 Query: 152 RSEYNEEWAPEAADGITLGSTILFYTKDAGVPVNFVPPSFAKDISETTIPLRRVIRSGDS 211 RSEY EEWAPE AD +TLGST+LFYTKDAG PV FVPP+FAKDI++T IP++RVIRSGDS Sbjct: 172 RSEYEEEWAPETADDVTLGSTLLFYTKDAGHPVKFVPPAFAKDITQTPIPIKRVIRSGDS 231 Query: 212 GCHYWWIEWGGEHDTVHDNEMIRDELWSVIYGIWDYIKNSGKFGAENMTLEWVGALPGKR 271 GCHYWWIEWGGE DTVHDNE IRDELWSVIYGIWDYIKNSGKF A NMTLEWVGA PGKR Sbjct: 232 GCHYWWIEWGGELDTVHDNERIRDELWSVIYGIWDYIKNSGKFDAANMTLEWVGAQPGKR 291 Query: 272 EYRRFIGDYVLNQNDIIAQREFADAVAFGGWSIDLHPPQGMYAEASGSKHMHADGVYHIP 331 EYRRF+GDYVL QNDI+AQ F D VAFGGWSIDLHPPQGMYAE SGSKHMHADG YHIP Sbjct: 292 EYRRFVGDYVLTQNDIMAQEPFEDRVAFGGWSIDLHPPQGMYAEESGSKHMHADGNYHIP 351 Query: 332 FRSLYSANVRNMLMAGRDISASHVAFGTTRVMATCAVIGEAAGTGAALSSRLGITPRGLH 391 FRSLYSANV N+L AGR+ISA+HVAFGTTRVMATCAV+GEAAGT AAL + G++PR L Sbjct: 352 FRSLYSANVANLLFAGRNISATHVAFGTTRVMATCAVLGEAAGTAAALCIQHGLSPRELS 411 Query: 392 ARHLTELRQTLLRQDASIIG 411 EL+QTLL+QDAS++G Sbjct: 412 RSRSGELQQTLLKQDASVLG 431 >B1D7W2.1 B1D7W2_9BACL Pyridine nucleotide-disulphide oxidoreductase Length = 749 Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust. Identities = 296/381 (77%), Positives = 336/381 (88%) Query: 32 VWVCGATAHGTNRYARETGIMGELFLENQYRNPEGNPYLWDLVVLEAVKAEANITLYLNT 91 VWVCGAT HG NRYARETGIMGELF++NQYRNPEGNPYLWD+ +LEAV+AE+N+TLY+NT Sbjct: 52 VWVCGATGHGVNRYARETGIMGELFIQNQYRNPEGNPYLWDVTLLEAVRAESNLTLYMNT 111 Query: 92 DVHEVQAEGPDDDRTITAVVGWMMASERRITFKSSMYLDCTGDGLIGFLAGAKFSLGREA 151 DV EV+A+G D R I +V GWMM SER +TF+S ++LDCTGDGL+GFLAGA + +GREA Sbjct: 112 DVREVEADGELDARIIRSVTGWMMGSEREMTFESDVFLDCTGDGLVGFLAGAAYRIGREA 171 Query: 152 RSEYNEEWAPEAADGITLGSTILFYTKDAGVPVNFVPPSFAKDISETTIPLRRVIRSGDS 211 R EY E+WAPEAAD ITLGST+LFYTKD G PV FV PSFAKDI+ T+IPL+RVIRSGDS Sbjct: 172 RQEYGEDWAPEAADDITLGSTLLFYTKDTGKPVRFVAPSFAKDITTTSIPLKRVIRSGDS 231 Query: 212 GCHYWWIEWGGEHDTVHDNEMIRDELWSVIYGIWDYIKNSGKFGAENMTLEWVGALPGKR 271 GCHYWWIEWGGE DTVH+NE IRDELWSVIYGIWDYIKNSG+F AENMTLEWVG++PGKR Sbjct: 232 GCHYWWIEWGGELDTVHENERIRDELWSVIYGIWDYIKNSGQFEAENMTLEWVGSIPGKR 291 Query: 272 EYRRFIGDYVLNQNDIIAQREFADAVAFGGWSIDLHPPQGMYAEASGSKHMHADGVYHIP 331 EYRRF+GD +L QND+IAQR F D +AFGGWSIDLHPPQGMYA SGSKH+HADG+YHIP Sbjct: 292 EYRRFLGDTILTQNDVIAQRPFEDRIAFGGWSIDLHPPQGMYATESGSKHLHADGIYHIP 351 Query: 332 FRSLYSANVRNMLMAGRDISASHVAFGTTRVMATCAVIGEAAGTGAALSSRLGITPRGLH 391 F SLYS NV N+L AGR++SASHVAFGTTRVMATCAV+GEAAG GAALS+ GITPR L Sbjct: 352 FGSLYSRNVGNLLFAGRNVSASHVAFGTTRVMATCAVMGEAAGVGAALSASKGITPRELR 411 Query: 392 ARHLTELRQTLLRQDASIIGF 412 RHLTEL+QT+LR DASIIG Sbjct: 412 ERHLTELQQTMLRMDASIIGL 432 >B3KF64.1 B3KF64_9BACI Pyridine nucleotide-disulphide oxidoreductase Length = 750 Score = 625 bits (1613), Expect = e-177, Method: Compositional matrix adjust. Identities = 290/381 (76%), Positives = 336/381 (88%) Query: 32 VWVCGATAHGTNRYARETGIMGELFLENQYRNPEGNPYLWDLVVLEAVKAEANITLYLNT 91 VWVCGATAHGT RYARETGIMGE+F+ENQ+RNP+GNPYLWDLVVLE V+AE NI L+LNT Sbjct: 52 VWVCGATAHGTQRYARETGIMGEMFVENQFRNPDGNPYLWDLVVLETVRAEPNIALFLNT 111 Query: 92 DVHEVQAEGPDDDRTITAVVGWMMASERRITFKSSMYLDCTGDGLIGFLAGAKFSLGREA 151 DVHEV+AEG +++R + +V GWMM SER+I F+S MY+DCTGDGL GFLAGAK+ +GREA Sbjct: 112 DVHEVEAEGTEEERIMKSVTGWMMGSERKIRFESDMYIDCTGDGLAGFLAGAKYRIGREA 171 Query: 152 RSEYNEEWAPEAADGITLGSTILFYTKDAGVPVNFVPPSFAKDISETTIPLRRVIRSGDS 211 EYNE+WAPE AD ITLGST+LFYTK+A PV ++PPSFAKDI++T IP++RVIRSGDS Sbjct: 172 AEEYNEDWAPETADDITLGSTLLFYTKEADRPVKYIPPSFAKDITQTAIPMKRVIRSGDS 231 Query: 212 GCHYWWIEWGGEHDTVHDNEMIRDELWSVIYGIWDYIKNSGKFGAENMTLEWVGALPGKR 271 GCHYWWIEWGGE DTVHDNE IRDELWSVIYG+WDYIKNSG F A+ MTLEWVG+LPGKR Sbjct: 232 GCHYWWIEWGGELDTVHDNERIRDELWSVIYGVWDYIKNSGNFDADRMTLEWVGSLPGKR 291 Query: 272 EYRRFIGDYVLNQNDIIAQREFADAVAFGGWSIDLHPPQGMYAEASGSKHMHADGVYHIP 331 EYRRF GDY+LNQNDIIAQ F D +AFGGWSIDLHPPQGMY+ SGSKH+ +DG+YHIP Sbjct: 292 EYRRFTGDYMLNQNDIIAQEPFTDRIAFGGWSIDLHPPQGMYSTESGSKHLFSDGIYHIP 351 Query: 332 FRSLYSANVRNMLMAGRDISASHVAFGTTRVMATCAVIGEAAGTGAALSSRLGITPRGLH 391 FR LYS+NV N++ AGRDISA+HVAFGTTRVMATCAVIGEAAG+GAAL + GI+PR LH Sbjct: 352 FRCLYSSNVSNLMFAGRDISATHVAFGTTRVMATCAVIGEAAGSGAALCVQKGISPRALH 411 Query: 392 ARHLTELRQTLLRQDASIIGF 412 H+ +L+QT+LRQDASIIG Sbjct: 412 RDHMNDLQQTMLRQDASIIGI 432 >A6M208.1 A6M208_CLOB8 Pyridine nucleotide-disulphide oxidoreductase Length = 745 Score = 568 bits (1465), Expect = e-160, Method: Compositional matrix adjust. Identities = 262/416 (62%), Positives = 317/416 (76%), Gaps = 4/416 (0%) Query: 1 VCGHCCGQTGAKGGAGAEPSRPRR----XXXXXXXVWVCGATAHGTNRYARETGIMGELF 56 + G C + A+ G + R VWVCGAT HG NRYARETGIMGELF Sbjct: 17 LAGVCAAISAARNGKSVSLVQNRGILGGNSSSEIRVWVCGATKHGVNRYARETGIMGELF 76 Query: 57 LENQYRNPEGNPYLWDLVVLEAVKAEANITLYLNTDVHEVQAEGPDDDRTITAVVGWMMA 116 LENQYRNP+GNPY WD+++LE VK E NI+L+LNT+V E+ + + I +V GW + Sbjct: 77 LENQYRNPDGNPYFWDMLLLEKVKDEKNISLFLNTEVSEIDVIEGEKENKIKSVTGWTIG 136 Query: 117 SERRITFKSSMYLDCTGDGLIGFLAGAKFSLGREARSEYNEEWAPEAADGITLGSTILFY 176 SE + F+S +YLDC+GDG IG LAGAK++LGRE+R EYNE APE D I LGSTILFY Sbjct: 137 SETKTKFESEVYLDCSGDGFIGALAGAKYNLGRESRYEYNELLAPEKEDKILLGSTILFY 196 Query: 177 TKDAGVPVNFVPPSFAKDISETTIPLRRVIRSGDSGCHYWWIEWGGEHDTVHDNEMIRDE 236 TKDAG PV F+PP+FAKDIS+T+IP RVI+S DSGC YWWIE GGE D V DNE+IRDE Sbjct: 197 TKDAGHPVKFIPPNFAKDISKTSIPKNRVIKSNDSGCCYWWIELGGEVDIVKDNEIIRDE 256 Query: 237 LWSVIYGIWDYIKNSGKFGAENMTLEWVGALPGKREYRRFIGDYVLNQNDIIAQREFADA 296 LW+++YGIWDYIKNSG + A+N+TLEWVG++PGKREYRRFIGDYVLNQNDII Q EF D Sbjct: 257 LWTLVYGIWDYIKNSGNYDADNLTLEWVGSIPGKREYRRFIGDYVLNQNDIIEQTEFDDR 316 Query: 297 VAFGGWSIDLHPPQGMYAEASGSKHMHADGVYHIPFRSLYSANVRNMLMAGRDISASHVA 356 +AFGGWSIDLHP +G+Y E+ GS+++ ADGV+HIPFRS YS NV N++ AGR+ISASH+A Sbjct: 317 IAFGGWSIDLHPEKGIYEESCGSRNIQADGVFHIPFRSTYSVNVSNLMFAGRNISASHIA 376 Query: 357 FGTTRVMATCAVIGEAAGTGAALSSRLGITPRGLHARHLTELRQTLLRQDASIIGF 412 FG TRVMATCA IGEA G AA+ I PR L+ +H+ +L+Q LLRQD SIIG Sbjct: 377 FGATRVMATCATIGEAVGLAAAMCVEDKIIPRDLYMKHIKKLQQILLRQDGSIIGI 432 >B1VSW2.1 B1VSW2_STRGG Putative uncharacterized protein Length = 762 Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust. Identities = 260/382 (68%), Positives = 310/382 (81%), Gaps = 1/382 (0%) Query: 32 VWVCGATAHGTNRYARETGIMGELFLENQYRNPEGNPYLWDLVVLEAVKAEANITLYLNT 91 VWVCGA+AHG +R+ARETGIMGEL+ ENQYRNPEGNPY WD VVL+AV+AE NI LYLNT Sbjct: 52 VWVCGASAHGVHRWARETGIMGELYTENQYRNPEGNPYYWDQVVLDAVRAEPNIDLYLNT 111 Query: 92 DVHEVQAEGPDDDRTITAVVGWMMASERRITFKSSMYLDCTGDGLIGFLAGAKFSLGREA 151 DV EV A GP+D R + + GWMM SERRITF + +LDCTGDGL+G LAGA+ +GRE+ Sbjct: 112 DVREVDASGPEDSREVHSCTGWMMGSERRITFHARQFLDCTGDGLLGHLAGARHRVGRES 171 Query: 152 RSEYNEEWAPEAADGITLGSTILFYTKDAGVPVNFVPPSFAKDISETTIPLRRVIRSGDS 211 R+E++E WAP+ ADG LGSTILF+TKD G PV FV P+ AKD+S+T I RV+R+GD+ Sbjct: 172 RAEFDEPWAPDEADGALLGSTILFHTKDTGRPVKFVAPAHAKDLSDTPILRNRVLRTGDN 231 Query: 212 GCHYWWIEWGGEHDTVHDNEMIRDELWSVIYGIWDYIKNSGKF-GAENMTLEWVGALPGK 270 GC YWWIEWGGE DTVHDNE IRDEL SVI GIWD+IKNSG+F A N+TLEWVG+LPGK Sbjct: 232 GCDYWWIEWGGELDTVHDNERIRDELQSVIMGIWDHIKNSGRFPDAANLTLEWVGSLPGK 291 Query: 271 REYRRFIGDYVLNQNDIIAQREFADAVAFGGWSIDLHPPQGMYAEASGSKHMHADGVYHI 330 REYRRF+GDYVL Q DI+ QR+F D +AFGGWS+DLHP QGMYA+ G++ +ADG++HI Sbjct: 292 REYRRFLGDYVLTQRDILQQRQFEDRIAFGGWSVDLHPVQGMYADEPGARQRYADGIFHI 351 Query: 331 PFRSLYSANVRNMLMAGRDISASHVAFGTTRVMATCAVIGEAAGTGAALSSRLGITPRGL 390 P RSLYSANV N+ AGR+ISA+H+AFG TRVMATCA +GEAAGT AAL G+TPR L Sbjct: 352 PLRSLYSANVTNLHFAGRNISATHIAFGATRVMATCATLGEAAGTAAALCVAEGLTPRQL 411 Query: 391 HARHLTELRQTLLRQDASIIGF 412 +R+TLLRQDAS+IG Sbjct: 412 ATERPELVRRTLLRQDASVIGL 433 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.136 0.432 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,612,454,615 Number of extensions: 112411855 Number of successful extensions: 223481 Number of sequences better than 1.0e-05: 265 Number of HSP's gapped: 223231 Number of HSP's successfully gapped: 269 Length of query: 419 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 281 Effective length of database: 1,760,596,133 Effective search space: 494727513373 Effective search space used: 494727513373 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 133 (55.8 bits)