BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0308.0003.p (225 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A0AC77.1 A0AC77_STRAM Putative NADP oxidoreductase 194 5e-48 Q889D1.1 Q889D1_PSESM Putative uncharacterized protein 186 1e-45 Q8PBA7.1 Q8PBA7_XANCP Putative uncharacterized protein 186 2e-45 Q4US99.1 Q4US99_XANC8 Putative uncharacterized protein 186 2e-45 B0RX86.1 B0RX86_XANCB Putative F420-dependent NADP reductase 186 2e-45 >A0AC77.1 A0AC77_STRAM Putative NADP oxidoreductase Length = 244 Score = 194 bits (493), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 90/221 (40%), Positives = 141/221 (63%), Gaps = 2/221 (0%) Query: 4 NGHDVKIADARGIERLEGKKLT--GTPVIVEDVIKNIDVLITSIPFHALPSIRXXXXXXX 61 GHDV++A++RG E ++ L V + +++ DV+I S+PF +P + Sbjct: 22 GGHDVEVANSRGPETVDAAVLEFGARAVTSREAVRDKDVIILSVPFGRIPDLAPLLASVP 81 Query: 62 XXXXXXDTSNYYPQMSGKIEEIENGMVESVWVSNHLGRPIIKAFNNFLAYTLEHHGTPEG 121 DTSNY+P++SG++E ++ G VES+WV+ LGRP++KA+N LA TL+ G P G Sbjct: 82 TETVVIDTSNYFPELSGRVEAVDQGQVESLWVAEQLGRPVVKAWNAVLAGTLQTRGVPAG 141 Query: 122 THGRIAIAIAGDNLSHKQIIIGVANVLGFDAVDSGSLSDSWRQQPGTPAYCTELTKEELA 181 T GRIA+ +A D+ + +++ +G+ + GFD D+G L+DSWRQQP TPAYCTELT EL Sbjct: 142 TPGRIALPVAADSDAARRVGMGLVDESGFDPCDAGVLADSWRQQPMTPAYCTELTLPELE 201 Query: 182 IALNQANKEKAPFLRDKVMEKLSASQGALSIQDIVKANREI 222 AL A++++AP RD+ M + + A ++ + V+ NR + Sbjct: 202 QALAAADRDEAPRNRDRQMSRFATLTSAPTLDETVELNRSL 242 >Q889D1.1 Q889D1_PSESM Putative uncharacterized protein Length = 248 Score = 186 bits (473), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 98/224 (43%), Positives = 136/224 (60%), Gaps = 2/224 (0%) Query: 1 LVENGHDVKIADARGIERLE--GKKLTGTPVIVEDVIKNIDVLITSIPFHALPSIRXXXX 58 L +GH++K+A++RG + + + + + V E+ + +DV+ITSIPF P + Sbjct: 19 LAASGHEIKLANSRGPDSIGDLARDVGASAVSKEEAVNGVDVVITSIPFANYPDLANLFS 78 Query: 59 XXXXXXXXXDTSNYYPQMSGKIEEIENGMVESVWVSNHLGRPIIKAFNNFLAYTLEHHGT 118 DTSNYYP G IE I++G ESVWVS +GRP++KA+N LA TL G Sbjct: 79 QVPAHVVVIDTSNYYPIRDGVIEGIDDGQPESVWVSKQIGRPVVKAWNALLAETLASKGL 138 Query: 119 PEGTHGRIAIAIAGDNLSHKQIIIGVANVLGFDAVDSGSLSDSWRQQPGTPAYCTELTKE 178 P G+ R+A+ +AGDN K + + + + GFDAVDSGSLSDSWRQQPGTPAYCTEL Sbjct: 139 PIGSPLRLALPVAGDNDEAKAVALKLVDATGFDAVDSGSLSDSWRQQPGTPAYCTELLVG 198 Query: 179 ELAIALNQANKEKAPFLRDKVMEKLSASQGALSIQDIVKANREI 222 EL AL A+K +A R+ V++ L ++ LS V NR + Sbjct: 199 ELERALAAADKTQAAQHRETVLKALMSAPEPLSHTQTVALNRAV 242 >Q8PBA7.1 Q8PBA7_XANCP Putative uncharacterized protein Length = 244 Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 95/224 (42%), Positives = 132/224 (58%), Gaps = 2/224 (0%) Query: 1 LVENGHDVKIADARGIERLE--GKKLTGTPVIVEDVIKNIDVLITSIPFHALPSIRXXXX 58 V GH VK+A ++ + + + + PV + +K+++V++ SIPF +P + Sbjct: 19 FVAAGHSVKLAGSKSPDSIRELAENIGAEPVAAVEAVKDVEVIVLSIPFAKIPEVAGLFS 78 Query: 59 XXXXXXXXXDTSNYYPQMSGKIEEIENGMVESVWVSNHLGRPIIKAFNNFLAYTLEHHGT 118 DTSNYYPQ+ +I E+++G +ESVW LGRPIIKAFN +A TL G Sbjct: 79 TVPAEVVVIDTSNYYPQLGTRIPEVDDGELESVWAREQLGRPIIKAFNAIIAKTLADGGK 138 Query: 119 PEGTHGRIAIAIAGDNLSHKQIIIGVANVLGFDAVDSGSLSDSWRQQPGTPAYCTELTKE 178 P GT RIAI +AGD+L+ K I + + GFDA+D+G+++DSWRQQPG PAYCTEL Sbjct: 139 PAGTDNRIAIPVAGDSLAGKAIAQQLLDDAGFDALDAGTIADSWRQQPGMPAYCTELPLA 198 Query: 179 ELAIALNQANKEKAPFLRDKVMEKLSASQGALSIQDIVKANREI 222 L ALN A K AP LRD +M + S + IV NR + Sbjct: 199 ALHSALNVAVKGDAPHLRDALMAEFFGGDIPPSHETIVARNRAV 242 >Q4US99.1 Q4US99_XANC8 Putative uncharacterized protein Length = 244 Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 95/224 (42%), Positives = 132/224 (58%), Gaps = 2/224 (0%) Query: 1 LVENGHDVKIADARGIERLE--GKKLTGTPVIVEDVIKNIDVLITSIPFHALPSIRXXXX 58 V GH VK+A ++ + + + + PV + +K+++V++ SIPF +P + Sbjct: 19 FVAAGHSVKLAGSKSPDSIRELAENIGAEPVAAVEAVKDVEVIVLSIPFAKIPEVAGLFS 78 Query: 59 XXXXXXXXXDTSNYYPQMSGKIEEIENGMVESVWVSNHLGRPIIKAFNNFLAYTLEHHGT 118 DTSNYYPQ+ +I E+++G +ESVW LGRPIIKAFN +A TL G Sbjct: 79 TVPAEVVVIDTSNYYPQLGTRIPEVDDGELESVWAREQLGRPIIKAFNAIIAKTLADGGK 138 Query: 119 PEGTHGRIAIAIAGDNLSHKQIIIGVANVLGFDAVDSGSLSDSWRQQPGTPAYCTELTKE 178 P GT RIAI +AGD+L+ K I + + GFDA+D+G+++DSWRQQPG PAYCTEL Sbjct: 139 PAGTDNRIAIPVAGDSLAGKAIAQQLLDDAGFDALDAGTIADSWRQQPGMPAYCTELPLA 198 Query: 179 ELAIALNQANKEKAPFLRDKVMEKLSASQGALSIQDIVKANREI 222 L ALN A K AP LRD +M + S + IV NR + Sbjct: 199 ALHSALNVAVKGDAPHLRDALMAEFFGGDIPPSHETIVARNRAV 242 >B0RX86.1 B0RX86_XANCB Putative F420-dependent NADP reductase Length = 244 Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 95/224 (42%), Positives = 132/224 (58%), Gaps = 2/224 (0%) Query: 1 LVENGHDVKIADARGIERLE--GKKLTGTPVIVEDVIKNIDVLITSIPFHALPSIRXXXX 58 V GH VK+A ++ + + + + PV + +K+++V++ SIPF +P + Sbjct: 19 FVAAGHSVKLAGSKSPDSIRELAENIGAEPVAAVEAVKDVEVIVLSIPFAKIPEVAGLFS 78 Query: 59 XXXXXXXXXDTSNYYPQMSGKIEEIENGMVESVWVSNHLGRPIIKAFNNFLAYTLEHHGT 118 DTSNYYPQ+ +I E+++G +ESVW LGRPIIKAFN +A TL G Sbjct: 79 TVPAEVVVIDTSNYYPQLGTRIPEVDDGELESVWAREQLGRPIIKAFNAIIAKTLADGGK 138 Query: 119 PEGTHGRIAIAIAGDNLSHKQIIIGVANVLGFDAVDSGSLSDSWRQQPGTPAYCTELTKE 178 P GT RIAI +AGD+L+ K I + + GFDA+D+G+++DSWRQQPG PAYCTEL Sbjct: 139 PAGTDNRIAIPVAGDSLAGKAIAQQLLDDAGFDALDAGTIADSWRQQPGMPAYCTELPLA 198 Query: 179 ELAIALNQANKEKAPFLRDKVMEKLSASQGALSIQDIVKANREI 222 L ALN A K AP LRD +M + S + IV NR + Sbjct: 199 ALHSALNVAVKGDAPHLRDALMAEFFGGDIPPSHETIVARNRAV 242 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.315 0.134 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,293,480,615 Number of extensions: 50887562 Number of successful extensions: 117206 Number of sequences better than 1.0e-05: 120 Number of HSP's gapped: 117110 Number of HSP's successfully gapped: 120 Length of query: 225 Length of database: 3,060,696,203 Length adjustment: 131 Effective length of query: 94 Effective length of database: 1,826,543,238 Effective search space: 171695064372 Effective search space used: 171695064372 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 129 (54.3 bits)