BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0307.0075.p (736 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C3AFL3.1 C3AFL3_BACMY Putative uncharacterized protein 647 0.0 C2X5C0.1 C2X5C0_BACCE Putative uncharacterized protein 645 0.0 C2YTM3.1 C2YTM3_BACCE Putative uncharacterized protein 645 0.0 C3HZ88.1 C3HZ88_BACTU Putative uncharacterized protein 644 0.0 C3AVB8.1 C3AVB8_BACMY Putative uncharacterized protein 640 0.0 >C3AFL3.1 C3AFL3_BACMY Putative uncharacterized protein Length = 700 Score = 647 bits (1669), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/702 (48%), Positives = 460/702 (65%), Gaps = 13/702 (1%) Query: 37 MGVHFGEETSIPGLASQKTLEVMEKEFPNPQSGLGKTQLVLKAPDNERLSSETAKQLVTA 96 MG F +E SIP + K +++EKEF Q + ++ KAP NE L S +Q + Sbjct: 1 MGSSFKDELSIPNTPADKAGKIIEKEFKAMQPAGAQVKVAFKAPKNETLESAEVQQKIAG 60 Query: 97 KLKEVAADPEVTSVVSPYDNHSLNADSTIGYATITYAVPGDEVTDESKDSVNEIAESLRD 156 L+E+ D V SV +P +L+ D TIGYA +TY V ++VT+ SKD + + E+ RD Sbjct: 61 VLEEIKKDSAVDSVAAPMQLQNLSEDKTIGYAVVTYKVKAEKVTEASKDKLLDSIETTRD 120 Query: 157 AGWQAELIGDG--YVKMATSSPTEXXXXXXXXXXXXXXXXXXXTGVLPIVTAXXXXXXXX 214 AG Q EL G + TS TE LPI+TA Sbjct: 121 AGIQTELSGGDVTFSDSETSGMTEIVGVLVAFVVLAFTFVSFLVAGLPILTAIIGLAIGM 180 Query: 215 XXXXXXTSFLDVPSFALSLAGMLGLAVGIDYALFIIARYRQQLAEGYERREAIAIANGTA 274 T+++++ S +LSLA MLGLAVGIDYALFII R+RQQLA+G E++AIA GTA Sbjct: 181 LGIMIGTNYVEIQSVSLSLAAMLGLAVGIDYALFIINRFRQQLAQGDSVPESVAIATGTA 240 Query: 275 GSAVVFAGVTVIIALVGFSFVGVPFLTAMGMAGALTVFTAILMTIFVVPAILDLLGGKVK 334 GSAV+FAG+TVII L+G S +PFLTAMG++ A TV A+L+++ ++PAIL L+G K+ Sbjct: 241 GSAVIFAGLTVIIGLLGLSVTKIPFLTAMGVSAAFTVLAAVLVSVIILPAILGLVGHKI- 299 Query: 335 APAKR-------AGSKQKPAGRSNLWGRFVTGHPXXXXXXXXXXXXXXXXPFFHMETGLG 387 AP+K+ G+ +K AG SN WG FV P PFFHM GL Sbjct: 300 APSKQNRFLQKMTGAGKKHAG-SNKWGEFVIRRPLIVTIFAIGLLAVISIPFFHMNLGLP 358 Query: 388 NDGH-KSPDKTERRAYDLLSEAYGEGYHGPLVLLAETDGGKEAAAN-LNKVIEEVKTYPN 445 +DG KS + TERRAYDLL+EAYGEG+H L+++A+++ N +N + +E+ P+ Sbjct: 359 SDGTTKSTETTERRAYDLLTEAYGEGFHASLMVVAKSEEATAETQNAMNTIAKELGNLPD 418 Query: 446 VAMVNPAVTAPSGKVSLITVMPATGPNDSATIDLVHLIRDKAPEIEQQDHIKIGVTGSTA 505 V V PA+ PSGK+ +I++ P TGP+D+ T DLV IRDK+ + E+++ I++ VTG+ A Sbjct: 419 VKSVTPAIPGPSGKIYMISITPKTGPDDTKTKDLVKAIRDKSNQTEKKNEIELMVTGTAA 478 Query: 506 VNIDITQKLNQALPEFCLIIVGLAFVLLMLVFRSILVPIKAVLGFILSLGATLGFVTYVV 565 +NIDI QKL+ ALP F +IVGLA+VLL+LVFRS+L+P+KAVLGF+LSLGATLG V + V Sbjct: 479 MNIDIVQKLSDALPVFAALIVGLAYVLLVLVFRSLLIPLKAVLGFLLSLGATLGAVVFFV 538 Query: 566 QDGHFQKLFGFYAEAPVFNFLPIIVVGVLFGLAMDYEVFLVSRMREEFKKSGDAKKSVLA 625 QDGHFQ +FGF A P+ FLP+I++G+LFGLAMDYEVFLVS+MRE + +GD K+++L Sbjct: 539 QDGHFQNIFGFPAAGPILAFLPVILIGILFGLAMDYEVFLVSKMREVYTHTGDPKRAILE 598 Query: 626 GIRHSGGVVTAAGLIMVAVFTGFILAEEPMVKVMGLALAFGVLFDAFIVRMLIVPGVMTL 685 G+R SG VV AAGLIM++VF GF+LA + ++K +G+AL FGV FDAFIVRM IVP VM L Sbjct: 599 GMRESGRVVVAAGLIMMSVFIGFMLAPDTIIKSIGMALTFGVFFDAFIVRMTIVPAVMIL 658 Query: 686 LGKSAWYFPKWLDRLLPNLDXXXXXXXXXXXKKQREFTKESN 727 +GKSAWY PKWLD++LPN+D K + K+++ Sbjct: 659 MGKSAWYLPKWLDKILPNIDVEGESIIHRVENKSEKIYKQNS 700 >C2X5C0.1 C2X5C0_BACCE Putative uncharacterized protein Length = 706 Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/703 (48%), Positives = 460/703 (65%), Gaps = 13/703 (1%) Query: 36 SMGVHFGEETSIPGLASQKTLEVMEKEFPNPQSGLGKTQLVLKAPDNERLSSETAKQLVT 95 ++G F +E SIP + K +V+EKEF Q + ++ KAP NE L S +Q + Sbjct: 6 NIGSSFKDELSIPNTPADKAGKVIEKEFKAMQPAGAQVKVAFKAPKNETLESAEVQQKIA 65 Query: 96 AKLKEVAADPEVTSVVSPYDNHSLNADSTIGYATITYAVPGDEVTDESKDSVNEIAESLR 155 L+E+ D V SV +P +L+ D TIGYA +TY V ++VT+ SKD + + E+ R Sbjct: 66 GVLEEIKKDSAVDSVAAPMQLQNLSEDKTIGYAVVTYKVKAEKVTEASKDKILDSIETTR 125 Query: 156 DAGWQAELIGDG--YVKMATSSPTEXXXXXXXXXXXXXXXXXXXTGVLPIVTAXXXXXXX 213 DAG Q EL G + TS TE LPI+TA Sbjct: 126 DAGIQTELSGGDVTFSDSETSGMTEIVGVLVAFVVLAFTFVSFLVAGLPILTAIIGLAIG 185 Query: 214 XXXXXXXTSFLDVPSFALSLAGMLGLAVGIDYALFIIARYRQQLAEGYERREAIAIANGT 273 T+++++ S +LSLA MLGLAVGIDYALFII R+RQQLA+G E++AIA GT Sbjct: 186 MLGIMIGTNYVEIQSVSLSLAAMLGLAVGIDYALFIINRFRQQLAQGDSVPESVAIATGT 245 Query: 274 AGSAVVFAGVTVIIALVGFSFVGVPFLTAMGMAGALTVFTAILMTIFVVPAILDLLGGKV 333 AGSAV+FAG+TVII L+G S +PFLTAMG++ A TV A+L+++ ++PAIL L+G K+ Sbjct: 246 AGSAVIFAGLTVIIGLLGLSVTKIPFLTAMGVSAAFTVLAAVLVSVIILPAILGLVGHKI 305 Query: 334 KAPAKR-------AGSKQKPAGRSNLWGRFVTGHPXXXXXXXXXXXXXXXXPFFHMETGL 386 AP+K+ G+ +K AG SN WG FV P PFFHM GL Sbjct: 306 -APSKQNRFLQKMTGAGKKHAG-SNKWGEFVIRRPLIVTIFSIGLLAVISIPFFHMNLGL 363 Query: 387 GNDGH-KSPDKTERRAYDLLSEAYGEGYHGPLVLLAETDGGKEAAAN-LNKVIEEVKTYP 444 +DG KS + TERRAYDLL+EAYGEG+H L+++A++D N +N + +E+ P Sbjct: 364 PSDGTTKSTETTERRAYDLLTEAYGEGFHASLMVVAKSDEATAETQNAMNTIAKELGNLP 423 Query: 445 NVAMVNPAVTAPSGKVSLITVMPATGPNDSATIDLVHLIRDKAPEIEQQDHIKIGVTGST 504 +V V PA+ PSGK+ +I++ P GP+D+ T DLV IRDK+ + E+++ +++ VTG+ Sbjct: 424 DVKSVTPAIPGPSGKIHMISITPKAGPDDTKTKDLVKAIRDKSNQTEKKNEVELMVTGTA 483 Query: 505 AVNIDITQKLNQALPEFCLIIVGLAFVLLMLVFRSILVPIKAVLGFILSLGATLGFVTYV 564 A+NIDI QKL+ ALP F +IVGLA+VLL+LVFRS+LVP+KAVLGF+LSLGATLG V + Sbjct: 484 AMNIDIVQKLSDALPVFAALIVGLAYVLLVLVFRSLLVPLKAVLGFLLSLGATLGAVVFF 543 Query: 565 VQDGHFQKLFGFYAEAPVFNFLPIIVVGVLFGLAMDYEVFLVSRMREEFKKSGDAKKSVL 624 VQDGHFQ +FGF A P+ FLP+I++G+LFGLAMDYEVFLVS+MRE + +GD K++++ Sbjct: 544 VQDGHFQNIFGFPAAGPILAFLPVILIGILFGLAMDYEVFLVSKMREVYTHTGDPKRAIV 603 Query: 625 AGIRHSGGVVTAAGLIMVAVFTGFILAEEPMVKVMGLALAFGVLFDAFIVRMLIVPGVMT 684 G+R SG VV AAGLIM++VF GF+LA + ++K +G+AL FGV FDAFIVRM IVP VM Sbjct: 604 EGMRESGRVVVAAGLIMMSVFIGFMLAPDTIIKSIGMALTFGVFFDAFIVRMTIVPAVMI 663 Query: 685 LLGKSAWYFPKWLDRLLPNLDXXXXXXXXXXXKKQREFTKESN 727 L+GKSAWY PKWLD++LPN+D K + K+++ Sbjct: 664 LMGKSAWYLPKWLDKILPNIDVEGESIIHRVENKSEKIYKQNS 706 >C2YTM3.1 C2YTM3_BACCE Putative uncharacterized protein Length = 700 Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/701 (48%), Positives = 456/701 (65%), Gaps = 11/701 (1%) Query: 37 MGVHFGEETSIPGLASQKTLEVMEKEFPNPQSGLGKTQLVLKAPDNERLSSETAKQLVTA 96 MG F +E SIP + K +V+EKEF Q + ++ KAP NE L S +Q + Sbjct: 1 MGSSFKDELSIPNTPADKAGKVIEKEFKAMQPAGAQVKVAFKAPKNETLESAEVQQKIAG 60 Query: 97 KLKEVAADPEVTSVVSPYDNHSLNADSTIGYATITYAVPGDEVTDESKDSVNEIAESLRD 156 L+E+ D V SV +P +L+ D TIGYA +TY V ++VT+ SKD + + E++RD Sbjct: 61 VLEEIKKDSAVDSVAAPMQLQNLSEDKTIGYAVVTYKVKAEKVTEASKDKILDSIETIRD 120 Query: 157 AGWQAELIGDG--YVKMATSSPTEXXXXXXXXXXXXXXXXXXXTGVLPIVTAXXXXXXXX 214 AG Q EL G + TS TE LPI+TA Sbjct: 121 AGIQTELSGGNVTFSDSETSGMTEIVGVLVAFVVLAFTFVSFLVAGLPILTAIIGLAIGM 180 Query: 215 XXXXXXTSFLDVPSFALSLAGMLGLAVGIDYALFIIARYRQQLAEGYERREAIAIANGTA 274 T+++++ S +LSLA MLGLAVGIDYALFII R+RQQLA+G E++AIA GTA Sbjct: 181 LGIMIGTNYVEIQSVSLSLAAMLGLAVGIDYALFIINRFRQQLAQGDSVPESVAIATGTA 240 Query: 275 GSAVVFAGVTVIIALVGFSFVGVPFLTAMGMAGALTVFTAILMTIFVVPAILDLLGGKVK 334 GSAV+FAG+TVII L+G S +PFLTAMG++ A TV A+L+++ ++PAIL L+G K+ Sbjct: 241 GSAVIFAGLTVIIGLLGLSVTKIPFLTAMGVSAAFTVLAAVLVSVIILPAILGLVGHKI- 299 Query: 335 APAKRAGSKQKPAGR------SNLWGRFVTGHPXXXXXXXXXXXXXXXXPFFHMETGLGN 388 AP+K+ QK G SN WG FV P PFFHM GL + Sbjct: 300 APSKQNRFLQKMTGAGKKHVGSNKWGEFVIRRPLIVTIFAIGLLAVISIPFFHMNLGLPS 359 Query: 389 DGH-KSPDKTERRAYDLLSEAYGEGYHGPLVLLAETDGGKEAAAN-LNKVIEEVKTYPNV 446 DG KS + TERRAYDLL+EAYGEG+H L+++A+++ N +N + +E+ P+V Sbjct: 360 DGTTKSTETTERRAYDLLTEAYGEGFHASLMVVAKSEEATAETQNAMNTIAKELGNLPDV 419 Query: 447 AMVNPAVTAPSGKVSLITVMPATGPNDSATIDLVHLIRDKAPEIEQQDHIKIGVTGSTAV 506 V PA+ PSGK+ +I++ P TGP+D+ T DLV IRDK+ + E+++ I++ VTG+ A+ Sbjct: 420 KSVTPAIPGPSGKIYMISITPKTGPDDTKTKDLVKAIRDKSNQTEKKNEIELMVTGTAAM 479 Query: 507 NIDITQKLNQALPEFCLIIVGLAFVLLMLVFRSILVPIKAVLGFILSLGATLGFVTYVVQ 566 NIDI QKL+ ALP F +IVGLA+VLL+LVFRS+L+P+KAVLGF+LSLGATLG V + VQ Sbjct: 480 NIDIVQKLSDALPVFAALIVGLAYVLLVLVFRSLLIPLKAVLGFLLSLGATLGAVVFFVQ 539 Query: 567 DGHFQKLFGFYAEAPVFNFLPIIVVGVLFGLAMDYEVFLVSRMREEFKKSGDAKKSVLAG 626 DGHFQ +FGF A P+ FLP+I++G+LFGLAMDYEVFLVS+MRE + +GD K++++ G Sbjct: 540 DGHFQNIFGFPAAGPILAFLPVILIGILFGLAMDYEVFLVSKMREVYTHTGDPKRAIVEG 599 Query: 627 IRHSGGVVTAAGLIMVAVFTGFILAEEPMVKVMGLALAFGVLFDAFIVRMLIVPGVMTLL 686 +R SG VV AAGLIM++VF GF+LA + ++K +G+AL FGV FDAFIVRM IVP VM L+ Sbjct: 600 MRESGRVVVAAGLIMMSVFIGFMLAPDTIIKSIGMALTFGVFFDAFIVRMTIVPAVMILM 659 Query: 687 GKSAWYFPKWLDRLLPNLDXXXXXXXXXXXKKQREFTKESN 727 G SAWY PKWLD++LPN+D K + K++ Sbjct: 660 GNSAWYLPKWLDKILPNIDVEGESIIHRVENKNEKIYKQNR 700 >C3HZ88.1 C3HZ88_BACTU Putative uncharacterized protein Length = 700 Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/702 (48%), Positives = 458/702 (65%), Gaps = 13/702 (1%) Query: 37 MGVHFGEETSIPGLASQKTLEVMEKEFPNPQSGLGKTQLVLKAPDNERLSSETAKQLVTA 96 MG F +E SIP + K +V+EKEF Q + ++ KAP NE L S +Q + Sbjct: 1 MGSSFKDELSIPNTPADKAGKVIEKEFKAMQPAGAQVKVTFKAPKNETLESAEVQQKIAG 60 Query: 97 KLKEVAADPEVTSVVSPYDNHSLNADSTIGYATITYAVPGDEVTDESKDSVNEIAESLRD 156 L+E+ D V SV +P +L+ D TIGYA +TY V ++VT+ SKD + + E+ RD Sbjct: 61 VLEEIKKDSAVDSVAAPMQLQNLSEDKTIGYAVVTYKVKAEKVTEASKDKILDSIETTRD 120 Query: 157 AGWQAELIGDG--YVKMATSSPTEXXXXXXXXXXXXXXXXXXXTGVLPIVTAXXXXXXXX 214 AG Q EL G + TS TE LPI+TA Sbjct: 121 AGIQTELSGGDVTFSDSETSGMTEIVGVLVAFVVLAFTFVSFLVAGLPILTAIIGLAIGM 180 Query: 215 XXXXXXTSFLDVPSFALSLAGMLGLAVGIDYALFIIARYRQQLAEGYERREAIAIANGTA 274 T+++++ S +LSLA MLGLAVGIDYALFII R+RQQLA+G E++AIA GTA Sbjct: 181 LGIIIGTNYVEIQSVSLSLAAMLGLAVGIDYALFIINRFRQQLAQGDSVPESVAIATGTA 240 Query: 275 GSAVVFAGVTVIIALVGFSFVGVPFLTAMGMAGALTVFTAILMTIFVVPAILDLLGGKVK 334 GSAV+FAG+TVII L+G S +PFLTAMG++ A TV A+L+++ ++PAIL L+G K+ Sbjct: 241 GSAVIFAGLTVIIGLLGLSVTKIPFLTAMGVSAAFTVLAAVLVSVIILPAILGLVGHKI- 299 Query: 335 APAKR-------AGSKQKPAGRSNLWGRFVTGHPXXXXXXXXXXXXXXXXPFFHMETGLG 387 AP+K+ G+ +K AG SN WG FV P PFFHM GL Sbjct: 300 APSKQNRFLQKMTGAGKKHAG-SNKWGEFVIRRPLIVTIFAIGLLAVISIPFFHMNLGLP 358 Query: 388 NDGH-KSPDKTERRAYDLLSEAYGEGYHGPLVLLAETDGGKEAAAN-LNKVIEEVKTYPN 445 +DG KS + TERRAYDLL+EAYGEG+H L+++A+++ N +N + +E+ P+ Sbjct: 359 SDGTTKSTETTERRAYDLLTEAYGEGFHASLMVVAKSEEATAETQNAMNTIAKELGNLPD 418 Query: 446 VAMVNPAVTAPSGKVSLITVMPATGPNDSATIDLVHLIRDKAPEIEQQDHIKIGVTGSTA 505 V V PA+ PSGK+ +I++ P TGP+D+ T DLV IRDK+ + E+++ I++ VTG+ A Sbjct: 419 VKSVTPAIPGPSGKIYMISITPKTGPDDTKTKDLVKAIRDKSNQAEKKNEIELMVTGTAA 478 Query: 506 VNIDITQKLNQALPEFCLIIVGLAFVLLMLVFRSILVPIKAVLGFILSLGATLGFVTYVV 565 +NIDI QKL+ ALP F +IVGLA+VLL+LVFRS+L+P+KAVLGF+LSLGATLG V + V Sbjct: 479 MNIDIVQKLSDALPVFAALIVGLAYVLLVLVFRSLLIPLKAVLGFLLSLGATLGAVVFFV 538 Query: 566 QDGHFQKLFGFYAEAPVFNFLPIIVVGVLFGLAMDYEVFLVSRMREEFKKSGDAKKSVLA 625 QDGHFQ +FGF A P+ FLP+I++G+LFGLAMDYEVFLVS+MRE + +GD K++++ Sbjct: 539 QDGHFQNIFGFPAAGPILAFLPVILIGILFGLAMDYEVFLVSKMREVYTHTGDPKRAIVE 598 Query: 626 GIRHSGGVVTAAGLIMVAVFTGFILAEEPMVKVMGLALAFGVLFDAFIVRMLIVPGVMTL 685 G+R SG VV AAGLIM++VF GF+LA + ++K +G+AL FGV FDAFIVRM IVP VM L Sbjct: 599 GMRESGRVVVAAGLIMMSVFIGFMLAPDTIIKSIGMALTFGVFFDAFIVRMTIVPAVMIL 658 Query: 686 LGKSAWYFPKWLDRLLPNLDXXXXXXXXXXXKKQREFTKESN 727 +G SAWY PKWLD++LPN+D K + K++ Sbjct: 659 MGNSAWYLPKWLDKILPNIDVEGESIIHRVENKNEKIYKQNR 700 >C3AVB8.1 C3AVB8_BACMY Putative uncharacterized protein Length = 700 Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust. Identities = 335/701 (47%), Positives = 456/701 (65%), Gaps = 11/701 (1%) Query: 37 MGVHFGEETSIPGLASQKTLEVMEKEFPNPQSGLGKTQLVLKAPDNERLSSETAKQLVTA 96 MG F +E SIP + K +V+EKEF Q + ++V KA NE L S +Q + Sbjct: 1 MGSSFKDELSIPNTPADKAGKVIEKEFKEMQPAGAQVKVVFKAQKNETLESAEVQQKIAG 60 Query: 97 KLKEVAADPEVTSVVSPYDNHSLNADSTIGYATITYAVPGDEVTDESKDSVNEIAESLRD 156 L+E+ D V SV +P +L+ D TIGYA +TY V ++VT+ SKD + + E+ R+ Sbjct: 61 VLEEIKKDSAVDSVAAPMQLQNLSEDKTIGYAVVTYKVKAEKVTEASKDKILDSIETTRN 120 Query: 157 AGWQAELIGDG--YVKMATSSPTEXXXXXXXXXXXXXXXXXXXTGVLPIVTAXXXXXXXX 214 AG Q EL G + TS TE LPI+TA Sbjct: 121 AGIQTELSGGDVTFSDSETSGMTEIVGVLVAFVVLAFTFVSFLVAGLPILTAIIGLAIGM 180 Query: 215 XXXXXXTSFLDVPSFALSLAGMLGLAVGIDYALFIIARYRQQLAEGYERREAIAIANGTA 274 T+++++ S +LSLA MLGLAVGIDYALFII R+RQQLA+G E++AIA GTA Sbjct: 181 LAIMIGTNYVEIQSVSLSLAAMLGLAVGIDYALFIINRFRQQLAQGDSVPESVAIATGTA 240 Query: 275 GSAVVFAGVTVIIALVGFSFVGVPFLTAMGMAGALTVFTAILMTIFVVPAILDLLGGKVK 334 GSAV+FAG+TVII L+G S +PFL AMG++ A TV A+L+++ ++PAIL L+G K+ Sbjct: 241 GSAVIFAGLTVIIGLLGLSVTKIPFLIAMGVSAAFTVLAAVLVSLVILPAILGLVGHKI- 299 Query: 335 APAKRAGSKQKPAGR------SNLWGRFVTGHPXXXXXXXXXXXXXXXXPFFHMETGLGN 388 AP+K+ QK G SN WG FV P PFFHM GL + Sbjct: 300 APSKQNRFLQKMTGAGKNHAGSNKWGEFVIRRPLIVTIFAIGLLAVISIPFFHMNLGLPS 359 Query: 389 DGH-KSPDKTERRAYDLLSEAYGEGYHGPLVLLAETDGGKEAAAN-LNKVIEEVKTYPNV 446 DG KS + TERRAYDLL++AYGEG+H L+++A+++ N +N + +E+ P+V Sbjct: 360 DGTTKSTETTERRAYDLLTQAYGEGFHASLMVVAKSEEATAETQNAMNTIAKELGNLPDV 419 Query: 447 AMVNPAVTAPSGKVSLITVMPATGPNDSATIDLVHLIRDKAPEIEQQDHIKIGVTGSTAV 506 V PA+ PSGK+ +I++ P TGP+D+ T DLV IRDK+ + E+++ I++ VTG+ A+ Sbjct: 420 KSVTPAIPGPSGKIYMISITPKTGPDDTKTKDLVKAIRDKSNQTEKKNEIELMVTGTAAM 479 Query: 507 NIDITQKLNQALPEFCLIIVGLAFVLLMLVFRSILVPIKAVLGFILSLGATLGFVTYVVQ 566 NIDI QKL+ ALP F +IVGLA+VLL+LVFRS+L+P+KAVLGF+LSLGATLG V + VQ Sbjct: 480 NIDIVQKLSDALPVFAALIVGLAYVLLVLVFRSLLIPLKAVLGFLLSLGATLGAVVFFVQ 539 Query: 567 DGHFQKLFGFYAEAPVFNFLPIIVVGVLFGLAMDYEVFLVSRMREEFKKSGDAKKSVLAG 626 DGHFQ +FGF A P+ FLP+I++G+LFGLAMDYEVFLVS+MRE + +GD K++++ G Sbjct: 540 DGHFQNIFGFPAAGPILAFLPVILIGILFGLAMDYEVFLVSKMREVYTHTGDPKRAIVEG 599 Query: 627 IRHSGGVVTAAGLIMVAVFTGFILAEEPMVKVMGLALAFGVLFDAFIVRMLIVPGVMTLL 686 +R SG VV AAGLIM++VF GF+LA + ++K +G+AL FGV FDAFIVRM IVP VM L+ Sbjct: 600 MRESGRVVVAAGLIMMSVFIGFMLAPDTIIKSIGMALTFGVFFDAFIVRMTIVPAVMILM 659 Query: 687 GKSAWYFPKWLDRLLPNLDXXXXXXXXXXXKKQREFTKESN 727 GKSAWY PKWLD++LPN+D K + K+++ Sbjct: 660 GKSAWYLPKWLDKILPNIDVEGESIIHRVENKSEKIYKQNS 700 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.137 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,829,672,445 Number of extensions: 153732898 Number of successful extensions: 507110 Number of sequences better than 1.0e-05: 1165 Number of HSP's gapped: 503099 Number of HSP's successfully gapped: 1931 Length of query: 736 Length of database: 3,060,696,203 Length adjustment: 143 Effective length of query: 593 Effective length of database: 1,713,491,058 Effective search space: 1016100197394 Effective search space used: 1016100197394 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 135 (56.6 bits)