BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0307.0039.p (682 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KAU4.1 B3KAU4_9BACI Transketolase 1096 0.0 B1DJI7.1 B1DJI7_9BACL Transketolase 1053 0.0 C5D9K8.1 C5D9K8_9BACI Transketolase 907 0.0 A4IMK5.1 A4IMK5_GEOTN Transketolase 902 0.0 B4BKU7.1 B4BKU7_9BACI Transketolase 902 0.0 >B3KAU4.1 B3KAU4_9BACI Transketolase Length = 673 Score = 1096 bits (2835), Expect = 0.0, Method: Compositional matrix adjust. Identities = 526/670 (78%), Positives = 577/670 (86%) Query: 13 EENSTVDNLAITTIRTLAIDAIEKANSGHPGMPMGSAPMGYQLFAKTMNHNPEHPTWVNR 72 E N T+DNL+I TIRTLAIDAIEKANSGHPGMPMGSAPMGYQLFAKTMNHNP+ P W+NR Sbjct: 4 EHNQTIDNLSIATIRTLAIDAIEKANSGHPGMPMGSAPMGYQLFAKTMNHNPDQPAWINR 63 Query: 73 DRFVLSAGHGSMLLYSLLHLSGYDLPMEELKQFRQWGSLTPGHPEFGHTAGVDATTGPLG 132 DRFVLSAGHGSMLLYSLLHLSGYDL +E+LKQFRQWGS TPGHPEFGHTAGVDATTGPLG Sbjct: 64 DRFVLSAGHGSMLLYSLLHLSGYDLSIEDLKQFRQWGSKTPGHPEFGHTAGVDATTGPLG 123 Query: 133 QGIGMAVGMAMAEAQLGATYNKGDHNVIDHYTYAICGDGDLMEGISSESASLAGHLKLGK 192 QG+ MAVGMAMAEA LGATYNK NV+DHYTYAICGDGD+MEG++SE+ASLAGHLKLGK Sbjct: 124 QGVAMAVGMAMAEAHLGATYNKDGFNVVDHYTYAICGDGDMMEGVASEAASLAGHLKLGK 183 Query: 193 LIVLYDSNDISLDGKLNLAFSENVAKRFEAYGWQVLRVEDGNDLPAISQAISEAQAESGK 252 LI+LYDSNDISLDG+LNLAFSENVAKRFEAYGWQVLRVEDGNDLPAI +AI EA+ +S + Sbjct: 184 LIMLYDSNDISLDGELNLAFSENVAKRFEAYGWQVLRVEDGNDLPAIEKAIEEAKGDSNR 243 Query: 253 PTLIEVKTVIGYXXXXXXXXXXXXXXXXXXXXAEEAKLTKDFYKWVYEENFYVPDEVRVR 312 PTLIEVKTVIGY A+EAKLTK+FYKWVYEE+FYVP+EVR Sbjct: 244 PTLIEVKTVIGYGSPNKQGKGGHGGTHGSPLGADEAKLTKEFYKWVYEEDFYVPEEVREH 303 Query: 313 FAEVKEKGIAANKAWDEKFAAYKKAYPELAAQLERALNGELPEGWDANLPFYKAEDKAVS 372 F +VKE+GIAA +AW ++FA YK+AYPELAAQ ER +GEL EGWD +LP Y +DKAVS Sbjct: 304 FGKVKERGIAAYQAWVDQFAKYKEAYPELAAQFERGESGELAEGWDKDLPKYSTDDKAVS 363 Query: 373 TRVASGNALNGLTAGVPQLVGGSADLESSTMTHLNGLDQFTPDSYGGRNIYFGVREFGMA 432 TRVASG ALNGLTAGVPQL+GGSADLESSTMTHLN L FT +SY GRN+Y+GVREF MA Sbjct: 364 TRVASGKALNGLTAGVPQLLGGSADLESSTMTHLNDLASFTAESYEGRNVYYGVREFAMA 423 Query: 433 AAMNGIALHSGLKVFGGTFFVFTDYLRPAVRLASIMKLPVTYVLTHDSIAVGEDGPTHEP 492 AMNGIALH GLK+FGGTFFVFTDYLRPA+RLA+IMKLPVTYVLTHDSIAVGEDGPTHEP Sbjct: 424 GAMNGIALHGGLKIFGGTFFVFTDYLRPAIRLAAIMKLPVTYVLTHDSIAVGEDGPTHEP 483 Query: 493 IEQLASLRIIPGLTVIRPADGNETSAAWAYAMENTSNPVALVLTRQNLPILQGTVDGVRD 552 IEQLASLRIIPG+TVIRPAD NETSAAWAYA+ENT PVALVLTRQNLPIL GT D R+ Sbjct: 484 IEQLASLRIIPGVTVIRPADANETSAAWAYAVENTDRPVALVLTRQNLPILAGTADHARE 543 Query: 553 NIKRGGYVISDSKNGTPQAQIIATGSEXXXXXXXXXXXXXXGIDVRVISLPSWDLFEKQD 612 IKRG YV+SD+K+G QAQIIATGSE GI VRVIS+PSWDLF+ QD Sbjct: 544 GIKRGAYVVSDAKDGNVQAQIIATGSEVQLAVKAQAALAEEGIAVRVISMPSWDLFDSQD 603 Query: 613 KAYRDSVILPEVKARLAIEMAQTFGWERYTGDQGDILGITTFGASAPGDTVIKEYGFTVE 672 +AY+DSV+LP+VKARLAIEMA FGWERY GD+GDILGI TFGASAPGD VI EYGFTVE Sbjct: 604 QAYKDSVLLPDVKARLAIEMAHPFGWERYVGDKGDILGINTFGASAPGDRVIAEYGFTVE 663 Query: 673 NVVSRVKALL 682 NVVSRVK LL Sbjct: 664 NVVSRVKGLL 673 >B1DJI7.1 B1DJI7_9BACL Transketolase Length = 672 Score = 1053 bits (2723), Expect = 0.0, Method: Compositional matrix adjust. Identities = 502/666 (75%), Positives = 565/666 (84%) Query: 17 TVDNLAITTIRTLAIDAIEKANSGHPGMPMGSAPMGYQLFAKTMNHNPEHPTWVNRDRFV 76 +++ L+I TIRTLAID+IEKANSGHPGMPMG+APMGYQLFAK M HNP +PTW+NRDRFV Sbjct: 7 SIEQLSIDTIRTLAIDSIEKANSGHPGMPMGAAPMGYQLFAKNMTHNPSNPTWINRDRFV 66 Query: 77 LSAGHGSMLLYSLLHLSGYDLPMEELKQFRQWGSLTPGHPEFGHTAGVDATTGPLGQGIG 136 LSAGHGSMLLYSLLHLSGYDLP+EEL+ FRQWGSLTPGHPEFGHTAGVDATTGPLGQG+ Sbjct: 67 LSAGHGSMLLYSLLHLSGYDLPLEELQNFRQWGSLTPGHPEFGHTAGVDATTGPLGQGVA 126 Query: 137 MAVGMAMAEAQLGATYNKGDHNVIDHYTYAICGDGDLMEGISSESASLAGHLKLGKLIVL 196 MAVGMAMAEA L ATYNK ++V++H+TY+ICGDGDLMEGIS E+AS AGHLKLGKL+VL Sbjct: 127 MAVGMAMAEAHLAATYNKEGYDVVNHFTYSICGDGDLMEGISHEAASFAGHLKLGKLVVL 186 Query: 197 YDSNDISLDGKLNLAFSENVAKRFEAYGWQVLRVEDGNDLPAISQAISEAQAESGKPTLI 256 YDSNDISLDG L+L++SE+V KRFE YGWQVLRVEDGNDL A+++AI+EAQAE+GKPTLI Sbjct: 187 YDSNDISLDGALDLSYSESVQKRFEGYGWQVLRVEDGNDLNALTKAIAEAQAETGKPTLI 246 Query: 257 EVKTVIGYXXXXXXXXXXXXXXXXXXXXAEEAKLTKDFYKWVYEENFYVPDEVRVRFAEV 316 EVKTVIGY A+E KLTK FY W E+ F+VPDEVR FAEV Sbjct: 247 EVKTVIGYGSPNKGGKGGHAGPHGSPLGADETKLTKQFYGWNEEDKFHVPDEVRAHFAEV 306 Query: 317 KEKGIAANKAWDEKFAAYKKAYPELAAQLERALNGELPEGWDANLPFYKAEDKAVSTRVA 376 K+ G AN AW+E+F AYKKAYPELAAQ E A +G+LPEGWD +LP Y EDK +STRVA Sbjct: 307 KQNGEKANAAWNEQFEAYKKAYPELAAQFELATSGQLPEGWDKDLPKYTTEDKPLSTRVA 366 Query: 377 SGNALNGLTAGVPQLVGGSADLESSTMTHLNGLDQFTPDSYGGRNIYFGVREFGMAAAMN 436 SGNALNGL VP L GGSADLESSTMTHL GL QF P SY GRNIY+GVREFGMAAAMN Sbjct: 367 SGNALNGLVHNVPALAGGSADLESSTMTHLKGLAQFKPGSYDGRNIYYGVREFGMAAAMN 426 Query: 437 GIALHSGLKVFGGTFFVFTDYLRPAVRLASIMKLPVTYVLTHDSIAVGEDGPTHEPIEQL 496 G++LH G+KVFGGTFFVFTDYLRPA+RLA+IMK PVTYVLTHDSIAVGEDGPTHEPIEQL Sbjct: 427 GMSLHGGMKVFGGTFFVFTDYLRPAIRLAAIMKQPVTYVLTHDSIAVGEDGPTHEPIEQL 486 Query: 497 ASLRIIPGLTVIRPADGNETSAAWAYAMENTSNPVALVLTRQNLPILQGTVDGVRDNIKR 556 AS+RIIP LTVIRPAD NETSAAWAYA+EN SNPVALVLTRQNLPIL+GTV G R+NIKR Sbjct: 487 ASIRIIPDLTVIRPADANETSAAWAYAVENQSNPVALVLTRQNLPILEGTVSGSRENIKR 546 Query: 557 GGYVISDSKNGTPQAQIIATGSEXXXXXXXXXXXXXXGIDVRVISLPSWDLFEKQDKAYR 616 G YV+SD+ NG PQAQIIATGSE GI VRVIS+PSWDLF+KQD+AY+ Sbjct: 547 GAYVVSDAANGAPQAQIIATGSEVQLAVAAQKALAEEGIQVRVISMPSWDLFDKQDQAYK 606 Query: 617 DSVILPEVKARLAIEMAQTFGWERYTGDQGDILGITTFGASAPGDTVIKEYGFTVENVVS 676 DSVILPEVKAR+A+EMA FGW+R+ GD+G ++GI FGASAPGD VIKEYGFTVENVVS Sbjct: 607 DSVILPEVKARVAVEMAHPFGWDRFVGDKGVVIGIDRFGASAPGDRVIKEYGFTVENVVS 666 Query: 677 RVKALL 682 VK++L Sbjct: 667 NVKSVL 672 >C5D9K8.1 C5D9K8_9BACI Transketolase Length = 668 Score = 907 bits (2343), Expect = 0.0, Method: Compositional matrix adjust. Identities = 437/667 (65%), Positives = 520/667 (77%), Gaps = 5/667 (0%) Query: 17 TVDNLAITTIRTLAIDAIEKANSGHPGMPMGSAPMGYQLFAKTMNHNPEHPTWVNRDRFV 76 T++ LAITTIRTL+IDAIEKA SGHPGMPMG+APM Y L+ K MNHNP +P W NRDRFV Sbjct: 4 TIEELAITTIRTLSIDAIEKAKSGHPGMPMGAAPMAYTLWTKFMNHNPSNPKWFNRDRFV 63 Query: 77 LSAGHGSMLLYSLLHLSGYDLPMEELKQFRQWGSLTPGHPEFGHTAGVDATTGPLGQGIG 136 LSAGHGSMLLYSLLHLSGYD+ ME++KQFRQWGS TPGHPE+GHT GV+ATTGPLGQGI Sbjct: 64 LSAGHGSMLLYSLLHLSGYDVSMEDIKQFRQWGSKTPGHPEYGHTPGVEATTGPLGQGIA 123 Query: 137 MAVGMAMAEAQLGATYNKGDHNVIDHYTYAICGDGDLMEGISSESASLAGHLKLGKLIVL 196 MAVGMAMAE L ATYN+ + +I+HYTYAICGDGDLMEG++SE+ASLAGHLKLG+LIVL Sbjct: 124 MAVGMAMAERHLAATYNRENFEIINHYTYAICGDGDLMEGVASEAASLAGHLKLGRLIVL 183 Query: 197 YDSNDISLDGKLNLAFSENVAKRFEAYGWQVLRVEDGNDLPAISQAISEAQAESGKPTLI 256 YDSNDISLDG+LNL+FSENV +RF+AYGWQ LRVEDGN++ I++AI EA+A++ +PTLI Sbjct: 184 YDSNDISLDGELNLSFSENVEQRFKAYGWQYLRVEDGNNIEEIAKAIEEAKADTTRPTLI 243 Query: 257 EVKTVIGYXXXXXXXXXXXXXXXXXXXXAEEAKLTKDFYKWVYEENFYVPDEVRVRFAE- 315 EVKT IGY AEE KLTK+ YKW +EE+FYVP EV F + Sbjct: 244 EVKTTIGY---GSPNKAGTSNVHGAPLGAEELKLTKEAYKWTFEEDFYVPQEVYDHFRQV 300 Query: 316 VKEKGIAANKAWDEKFAAYKKAYPELAAQLERALNGELPEGWDANLPFYKAEDKAVSTRV 375 VKE G W+E FA Y+KAYP+LA QL+ A+NGELPEGW+ LP Y+ E K+++TR Sbjct: 301 VKEAGEKKEAEWNELFAQYEKAYPDLAKQLKLAMNGELPEGWEKALPVYE-EGKSLATRA 359 Query: 376 ASGNALNGLTAGVPQLVGGSADLESSTMTHLNGLDQFTPDSYGGRNIYFGVREFGMAAAM 435 +SG LN + VPQL+GGSADL SS T + G F P+SY GRNI+FGVREF M AA+ Sbjct: 360 SSGEVLNAIAKVVPQLIGGSADLASSNKTLIKGAGNFLPESYEGRNIWFGVREFAMGAAL 419 Query: 436 NGIALHSGLKVFGGTFFVFTDYLRPAVRLASIMKLPVTYVLTHDSIAVGEDGPTHEPIEQ 495 NG+ALH GLKVFGGTFFVF+DYLRPA+RLA++M LPVTYVLTHDSIAVGEDGPTHEPIE Sbjct: 420 NGMALHGGLKVFGGTFFVFSDYLRPAIRLAALMGLPVTYVLTHDSIAVGEDGPTHEPIEH 479 Query: 496 LASLRIIPGLTVIRPADGNETSAAWAYAMENTSNPVALVLTRQNLPILQGTVDGVRDNIK 555 L SLR +P L+VIRPAD NET+AAW A+E+T P ALVLTRQN+P L T + + +K Sbjct: 480 LPSLRAMPNLSVIRPADANETAAAWRLAVESTDQPTALVLTRQNVPTLPNTAERAYEGVK 539 Query: 556 RGGYVISDSKNGTPQAQIIATGSEXXXXXXXXXXXXXXGIDVRVISLPSWDLFEKQDKAY 615 +G YV+S++KNG P+A ++A+GSE GI V VIS+PSWD FEKQ Y Sbjct: 540 KGAYVLSEAKNGNPEALLLASGSEVSLAVKAQQALAEEGIHVSVISMPSWDRFEKQPDEY 599 Query: 616 RDSVILPEVKARLAIEMAQTFGWERYTGDQGDILGITTFGASAPGDTVIKEYGFTVENVV 675 + V+ VK RLAIEMA + GWERY GD+GDIL I FGASAPG+ +++EYGFTVENVV Sbjct: 600 KQQVLPRTVKKRLAIEMAASLGWERYVGDEGDILAIDRFGASAPGEKIMEEYGFTVENVV 659 Query: 676 SRVKALL 682 RVKALL Sbjct: 660 KRVKALL 666 >A4IMK5.1 A4IMK5_GEOTN Transketolase Length = 682 Score = 902 bits (2331), Expect = 0.0, Method: Compositional matrix adjust. Identities = 434/667 (65%), Positives = 521/667 (78%), Gaps = 5/667 (0%) Query: 17 TVDNLAITTIRTLAIDAIEKANSGHPGMPMGSAPMGYQLFAKTMNHNPEHPTWVNRDRFV 76 +++ LAITTIRTL+IDAIEKA SGHPGMPMG+APM Y L+ K MNHNP +P W NRDRFV Sbjct: 18 SIEQLAITTIRTLSIDAIEKAKSGHPGMPMGAAPMAYTLWTKFMNHNPANPNWFNRDRFV 77 Query: 77 LSAGHGSMLLYSLLHLSGYDLPMEELKQFRQWGSLTPGHPEFGHTAGVDATTGPLGQGIG 136 LSAGHGSMLLYSLLHLSGYD+ M++LKQFRQWGS TPGHPE+GHT GV+ATTGPLGQGI Sbjct: 78 LSAGHGSMLLYSLLHLSGYDVSMDDLKQFRQWGSKTPGHPEYGHTPGVEATTGPLGQGIA 137 Query: 137 MAVGMAMAEAQLGATYNKGDHNVIDHYTYAICGDGDLMEGISSESASLAGHLKLGKLIVL 196 MAVGMAMAE L ATYN+ ++IDHYTYAICGDGDLMEG++SE+ASLAGHL+LG+LIVL Sbjct: 138 MAVGMAMAERHLAATYNRDGFDMIDHYTYAICGDGDLMEGVASEAASLAGHLQLGRLIVL 197 Query: 197 YDSNDISLDGKLNLAFSENVAKRFEAYGWQVLRVEDGNDLPAISQAISEAQAESGKPTLI 256 YDSNDISLDG+LNL+FSENVA+RF+AYGWQ LRVEDGN++ I++A+ EA+A+ +PTLI Sbjct: 198 YDSNDISLDGELNLSFSENVAQRFQAYGWQYLRVEDGNNIEEIAKALEEARADLNRPTLI 257 Query: 257 EVKTVIGYXXXXXXXXXXXXXXXXXXXXAEEAKLTKDFYKWVYEENFYVPDEVRVRFAE- 315 EVKT IGY AEEAKLTK+ Y+W + E+FYVP+EV F E Sbjct: 258 EVKTTIGY---GSPTKAGTSSVHGAPLGAEEAKLTKEAYRWTFAEDFYVPEEVYAHFRET 314 Query: 316 VKEKGIAANKAWDEKFAAYKKAYPELAAQLERALNGELPEGWDANLPFYKAEDKAVSTRV 375 V+E G W+E+ AAY++AYPELAAQL++A+ G+LP+GW+A LP Y+A K+++TR Sbjct: 315 VQEVGAKKEAEWNERLAAYEQAYPELAAQLKQAIEGKLPDGWEAALPVYEA-GKSLATRS 373 Query: 376 ASGNALNGLTAGVPQLVGGSADLESSTMTHLNGLDQFTPDSYGGRNIYFGVREFGMAAAM 435 +SG +N + VPQL+GGSADL SS T + F P SY GRNI+FGVREF M AA+ Sbjct: 374 SSGEVINAIAKAVPQLLGGSADLASSNKTLIKEGGNFLPGSYEGRNIWFGVREFAMGAAL 433 Query: 436 NGIALHSGLKVFGGTFFVFTDYLRPAVRLASIMKLPVTYVLTHDSIAVGEDGPTHEPIEQ 495 NG+ALH G+KVFGGTFFVF+DYLRPA+RLA++M LPVTYVLTHDS+AVGEDGPTHEPIEQ Sbjct: 434 NGMALHGGVKVFGGTFFVFSDYLRPAIRLAALMGLPVTYVLTHDSVAVGEDGPTHEPIEQ 493 Query: 496 LASLRIIPGLTVIRPADGNETSAAWAYAMENTSNPVALVLTRQNLPILQGTVDGVRDNIK 555 LASLR +P L+VIRPAD NET+AAW A+E+T P ALVLTRQN+P L T D + +K Sbjct: 494 LASLRAMPNLSVIRPADANETAAAWRLAVESTDKPTALVLTRQNIPTLPTTADLAYEGVK 553 Query: 556 RGGYVISDSKNGTPQAQIIATGSEXXXXXXXXXXXXXXGIDVRVISLPSWDLFEKQDKAY 615 +G YV+S +KNG P+A ++ATGSE GI V V+S+PSWD FE Q KAY Sbjct: 554 KGAYVVSPAKNGAPEALLLATGSEVSLAVQAQEALAAEGIHVSVVSMPSWDRFEAQPKAY 613 Query: 616 RDSVILPEVKARLAIEMAQTFGWERYTGDQGDILGITTFGASAPGDTVIKEYGFTVENVV 675 RD VI P V RLAIEM + GWERY G GDIL I FGASAPG+ ++ EYGFTV+NVV Sbjct: 614 RDEVIPPAVTKRLAIEMGASLGWERYVGADGDILAIDRFGASAPGEKIMAEYGFTVDNVV 673 Query: 676 SRVKALL 682 RVKALL Sbjct: 674 HRVKALL 680 >B4BKU7.1 B4BKU7_9BACI Transketolase Length = 668 Score = 902 bits (2330), Expect = 0.0, Method: Compositional matrix adjust. Identities = 434/667 (65%), Positives = 521/667 (78%), Gaps = 5/667 (0%) Query: 17 TVDNLAITTIRTLAIDAIEKANSGHPGMPMGSAPMGYQLFAKTMNHNPEHPTWVNRDRFV 76 +++ LAITTIRTL+IDAIEKA SGHPGMPMG+APM Y L+ K MNHNP +P W NRDRFV Sbjct: 4 SIEQLAITTIRTLSIDAIEKAKSGHPGMPMGAAPMAYTLWTKFMNHNPANPNWFNRDRFV 63 Query: 77 LSAGHGSMLLYSLLHLSGYDLPMEELKQFRQWGSLTPGHPEFGHTAGVDATTGPLGQGIG 136 LSAGHGSMLLYSLLHLSGYD+ M++LKQFRQWGS TPGHPE+GHT GV+ATTGPLGQGI Sbjct: 64 LSAGHGSMLLYSLLHLSGYDVSMDDLKQFRQWGSKTPGHPEYGHTPGVEATTGPLGQGIA 123 Query: 137 MAVGMAMAEAQLGATYNKGDHNVIDHYTYAICGDGDLMEGISSESASLAGHLKLGKLIVL 196 MAVGMAMAE L ATYN+ ++IDHYTYAICGDGDLMEG++SE+ASLAGHL+LG+LIVL Sbjct: 124 MAVGMAMAERHLAATYNRDGFDMIDHYTYAICGDGDLMEGVASEAASLAGHLQLGRLIVL 183 Query: 197 YDSNDISLDGKLNLAFSENVAKRFEAYGWQVLRVEDGNDLPAISQAISEAQAESGKPTLI 256 YDSNDISLDG+LNL+FSENVA+RF+AYGWQ LRVEDGN++ I++A+ EA+A+ +PTLI Sbjct: 184 YDSNDISLDGELNLSFSENVAQRFQAYGWQYLRVEDGNNIEEIAKALEEARADLNRPTLI 243 Query: 257 EVKTVIGYXXXXXXXXXXXXXXXXXXXXAEEAKLTKDFYKWVYEENFYVPDEVRVRFAE- 315 EVKT IGY AEEAKLTK+ Y+W + E+FYVP+EV F E Sbjct: 244 EVKTTIGY---GSPTKAGTSSVHGAPLGAEEAKLTKEAYRWTFAEDFYVPEEVYAHFRET 300 Query: 316 VKEKGIAANKAWDEKFAAYKKAYPELAAQLERALNGELPEGWDANLPFYKAEDKAVSTRV 375 V+E G W+E+ AAY++AYPELAAQL++A+ G+LP+GW+A LP Y+A K+++TR Sbjct: 301 VQEVGAKKEAEWNERLAAYEQAYPELAAQLKQAIEGKLPDGWEAALPVYEA-GKSLATRS 359 Query: 376 ASGNALNGLTAGVPQLVGGSADLESSTMTHLNGLDQFTPDSYGGRNIYFGVREFGMAAAM 435 +SG +N + VPQL+GGSADL SS T + F P SY GRNI+FGVREF M AA+ Sbjct: 360 SSGEVINAIAKAVPQLLGGSADLASSNKTLIKEGGNFLPGSYEGRNIWFGVREFAMGAAL 419 Query: 436 NGIALHSGLKVFGGTFFVFTDYLRPAVRLASIMKLPVTYVLTHDSIAVGEDGPTHEPIEQ 495 NG+ALH G+KVFGGTFFVF+DYLRPA+RLA++M LPVTYVLTHDS+AVGEDGPTHEPIEQ Sbjct: 420 NGMALHGGVKVFGGTFFVFSDYLRPAIRLAALMGLPVTYVLTHDSVAVGEDGPTHEPIEQ 479 Query: 496 LASLRIIPGLTVIRPADGNETSAAWAYAMENTSNPVALVLTRQNLPILQGTVDGVRDNIK 555 LASLR +P L+VIRPAD NET+AAW A+E+T P ALVLTRQN+P L T D + +K Sbjct: 480 LASLRAMPNLSVIRPADANETAAAWRLAVESTDKPTALVLTRQNIPTLPTTADLAYEGVK 539 Query: 556 RGGYVISDSKNGTPQAQIIATGSEXXXXXXXXXXXXXXGIDVRVISLPSWDLFEKQDKAY 615 +G YV+S +KNG P+A ++ATGSE GI V V+S+PSWD FE Q KAY Sbjct: 540 KGAYVVSPAKNGAPEALLLATGSEVSLAVQAQEALAAEGIHVSVVSMPSWDRFEAQPKAY 599 Query: 616 RDSVILPEVKARLAIEMAQTFGWERYTGDQGDILGITTFGASAPGDTVIKEYGFTVENVV 675 RD VI P V RLAIEM + GWERY G GDIL I FGASAPG+ ++ EYGFTV+NVV Sbjct: 600 RDEVIPPAVTKRLAIEMGASLGWERYVGADGDILAIDRFGASAPGEKIMAEYGFTVDNVV 659 Query: 676 SRVKALL 682 RVKALL Sbjct: 660 HRVKALL 666 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.316 0.134 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 4,021,327,193 Number of extensions: 171777839 Number of successful extensions: 447613 Number of sequences better than 1.0e-05: 3093 Number of HSP's gapped: 435603 Number of HSP's successfully gapped: 3253 Length of query: 682 Length of database: 3,060,696,203 Length adjustment: 143 Effective length of query: 539 Effective length of database: 1,713,491,058 Effective search space: 923571680262 Effective search space used: 923571680262 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 135 (56.6 bits)