BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0307.0038.p
         (72 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KAU5.1 B3KAU5_9BACI Putative uncharacterized protein                108   1e-22
C1T323.1 C1T323_DESBA Uncharacterized conserved protein                97   5e-19
A5G3P2.1 Y2227_GEOUR UPF0345 protein Gura_2227                         94   5e-18
Q055P9.1 Y336_LEPBL UPF0345 protein LBL_0336                           93   7e-18
Q04PM6.1 Y2734_LEPBJ UPF0345 protein LBJ_2734                          93   7e-18

>B3KAU5.1 B3KAU5_9BACI Putative uncharacterized protein
          Length = 105

 Score =  108 bits (271), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 50/72 (69%), Positives = 58/72 (80%)

Query: 1   VTLGIMLPGVYEFGTEGPETMEILSGELKVLLPGTDVWKEIKGTDTFHVPGNSKFALEVF 60
           VTLGIMLPG YEFGT+GPE MEILSG+L+VLLPG   W EI+   TF+VPGNS F LE+ 
Sbjct: 34  VTLGIMLPGSYEFGTDGPEIMEILSGDLRVLLPGEQEWLEIQEPATFNVPGNSSFKLEIR 93

Query: 61  ALTDYCCSYPVL 72
            +TDYCCSYP +
Sbjct: 94  TVTDYCCSYPTM 105


>C1T323.1 C1T323_DESBA Uncharacterized conserved protein
          Length = 104

 Score = 97.1 bits (240), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 43/68 (63%), Positives = 52/68 (76%)

Query: 2   TLGIMLPGVYEFGTEGPETMEILSGELKVLLPGTDVWKEIKGTDTFHVPGNSKFALEVFA 61
           TLG+MLPG YEFGT   E MEILSGEL++LLPG   WK I G   F VP N++F+L++ A
Sbjct: 35  TLGVMLPGDYEFGTAEKELMEILSGELEILLPGETAWKRISGGMAFEVPANARFSLKILA 94

Query: 62  LTDYCCSY 69
           +TDYCCSY
Sbjct: 95  VTDYCCSY 102


>A5G3P2.1 Y2227_GEOUR UPF0345 protein Gura_2227
          Length = 104

 Score = 93.6 bits (231), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 42/68 (61%), Positives = 52/68 (76%)

Query: 2   TLGIMLPGVYEFGTEGPETMEILSGELKVLLPGTDVWKEIKGTDTFHVPGNSKFALEVFA 61
           TLG+M+PG YEF T   E MEILSG+L VLLPG D W+ IKG ++F VP N+ F L+V +
Sbjct: 35  TLGVMMPGDYEFNTGSAELMEILSGDLDVLLPGADSWQTIKGGESFDVPANAAFKLKVKS 94

Query: 62  LTDYCCSY 69
           LTDYCCS+
Sbjct: 95  LTDYCCSF 102


>Q055P9.1 Y336_LEPBL UPF0345 protein LBL_0336
          Length = 104

 Score = 93.2 bits (230), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 39/68 (57%), Positives = 51/68 (75%)

Query: 2   TLGIMLPGVYEFGTEGPETMEILSGELKVLLPGTDVWKEIKGTDTFHVPGNSKFALEVFA 61
           TLGI++PG Y+FGT+  E MEIL G++ V LPG D WKEIKG  +F VP  S+F ++V  
Sbjct: 35  TLGILMPGQYDFGTDEKEIMEILDGDMLVKLPGEDSWKEIKGAQSFEVPAKSRFQMDVKK 94

Query: 62  LTDYCCSY 69
           ++DYCCSY
Sbjct: 95  ISDYCCSY 102


>Q04PM6.1 Y2734_LEPBJ UPF0345 protein LBJ_2734
          Length = 104

 Score = 93.2 bits (230), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 39/68 (57%), Positives = 51/68 (75%)

Query: 2   TLGIMLPGVYEFGTEGPETMEILSGELKVLLPGTDVWKEIKGTDTFHVPGNSKFALEVFA 61
           TLGI++PG Y+FGT+  E MEIL G++ V LPG D WKEIKG  +F VP  S+F ++V  
Sbjct: 35  TLGILMPGQYDFGTDEKEIMEILDGDMLVKLPGEDSWKEIKGAQSFEVPAKSRFQMDVKK 94

Query: 62  LTDYCCSY 69
           ++DYCCSY
Sbjct: 95  ISDYCCSY 102


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.320    0.142    0.442 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 473,109,232
Number of extensions: 16492494
Number of successful extensions: 34303
Number of sequences better than 1.0e-05: 322
Number of HSP's gapped: 34302
Number of HSP's successfully gapped: 322
Length of query: 72
Length of database: 3,060,696,203
Length adjustment: 43
Effective length of query: 29
Effective length of database: 2,655,592,558
Effective search space: 77012184182
Effective search space used: 77012184182
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 126 (53.1 bits)