BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0307.0035.p (160 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C2ZPK4.1 C2ZPK4_BACCE Acetyltransferase 109 8e-23 C2Z803.1 C2Z803_BACCE Acetyltransferase 109 8e-23 Q4MU83.1 Q4MU83_BACCE Acetyltransferase 105 1e-21 B7HR85.1 B7HR85_BACC7 Acetyltransferase, GNAT family 105 1e-21 B9J0T0.1 B9J0T0_BACCQ Possible acetyltransferase 105 2e-21 >C2ZPK4.1 C2ZPK4_BACCE Acetyltransferase Length = 308 Score = 109 bits (272), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 60/141 (42%), Positives = 84/141 (59%), Gaps = 9/141 (6%) Query: 1 MLSILIAEPQDADLLAEIQKRTFDEDARRFQNKEED------GPPGYSSSSWQSEMMEKG 54 ++SI A DA+ L EI KRTFDE+A+R+ +E PPGYSS +E+ Sbjct: 3 IISIEKATILDAEKLTEIMKRTFDEEAKRWLCDQEGVIDYNIQPPGYSSVEMTIYSIEEL 62 Query: 55 LYYKLIADGHIIGGMIVFPSPDGQEY-HLGRIFIDPLHQNRGFGQDVFHFLFSTFPNAHK 113 Y+K+I D I+GG+IV S G+ Y + RIF++P HQ +G G V F+ FP+ Sbjct: 63 DYFKVIMDEEIVGGIIVTIS--GKSYGRIDRIFVNPKHQGKGIGSQVIDFIEEEFPSVRI 120 Query: 114 WTLDTPSWAVRNHYFYKKLGF 134 W L+T S + NH+FYKK+GF Sbjct: 121 WDLETSSRQINNHHFYKKMGF 141 >C2Z803.1 C2Z803_BACCE Acetyltransferase Length = 308 Score = 109 bits (272), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 60/141 (42%), Positives = 84/141 (59%), Gaps = 9/141 (6%) Query: 1 MLSILIAEPQDADLLAEIQKRTFDEDARRFQNKEED------GPPGYSSSSWQSEMMEKG 54 ++SI A DA+ L EI KRTFDE+A+R+ +E PPGYSS +E+ Sbjct: 3 IISIEKATILDAEKLTEIMKRTFDEEAKRWLCDQEGVIDYNIQPPGYSSVEMTIYSIEEL 62 Query: 55 LYYKLIADGHIIGGMIVFPSPDGQEY-HLGRIFIDPLHQNRGFGQDVFHFLFSTFPNAHK 113 Y+K+I D I+GG+IV S G+ Y + RIF++P HQ +G G V F+ FP+ Sbjct: 63 DYFKVIMDEEIVGGIIVTIS--GKSYGRIDRIFVNPKHQGKGIGSQVIDFIEEEFPSVRI 120 Query: 114 WTLDTPSWAVRNHYFYKKLGF 134 W L+T S + NH+FYKK+GF Sbjct: 121 WDLETSSRQINNHHFYKKMGF 141 >Q4MU83.1 Q4MU83_BACCE Acetyltransferase Length = 308 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 57/141 (40%), Positives = 84/141 (59%), Gaps = 9/141 (6%) Query: 1 MLSILIAEPQDADLLAEIQKRTFDEDARRFQNKEED------GPPGYSSSSWQSEMMEKG 54 ++SI A DA+ L EI RTFDE+ +R+ + D PPGYSS +E+ Sbjct: 3 IISIEKATILDAEKLTEIMTRTFDEEKKRWLCGQGDVIDYNIQPPGYSSVEMMRYSIEEL 62 Query: 55 LYYKLIADGHIIGGMIVFPSPDGQEY-HLGRIFIDPLHQNRGFGQDVFHFLFSTFPNAHK 113 YK+I DG IIGG+IV S G+ Y + RIF+DP++Q +G G +V + + +P+ Sbjct: 63 NCYKVIMDGKIIGGIIVTIS--GKSYGRIDRIFVDPVYQGKGIGSNVIKLIEAEYPSIRI 120 Query: 114 WTLDTPSWAVRNHYFYKKLGF 134 W L+T S + NH+FYKK+G+ Sbjct: 121 WDLETSSRQINNHHFYKKMGY 141 >B7HR85.1 B7HR85_BACC7 Acetyltransferase, GNAT family Length = 308 Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 57/141 (40%), Positives = 85/141 (60%), Gaps = 9/141 (6%) Query: 1 MLSILIAEPQDADLLAEIQKRTFDEDARRFQNKEED------GPPGYSSSSWQSEMMEKG 54 ++SI A DA+ L EI RTFDE+A+R+ + D PPGYSS +E+ Sbjct: 3 IISIEKATILDAEKLTEIMTRTFDEEAKRWLYGQGDVIDYNIQPPGYSSVEMMRYSIEEL 62 Query: 55 LYYKLIADGHIIGGMIVFPSPDGQEY-HLGRIFIDPLHQNRGFGQDVFHFLFSTFPNAHK 113 YK+I DG IIGG+IV S G+ Y + RIF++P++Q +G G +V + + +P+ Sbjct: 63 NCYKVIMDGKIIGGIIVTIS--GKSYGRIDRIFVEPVYQGKGIGSNVIKLIEAEYPSIRI 120 Query: 114 WTLDTPSWAVRNHYFYKKLGF 134 W L+T S + NH+FYKK+G+ Sbjct: 121 WDLETSSRQINNHHFYKKMGY 141 >B9J0T0.1 B9J0T0_BACCQ Possible acetyltransferase Length = 308 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 57/141 (40%), Positives = 85/141 (60%), Gaps = 9/141 (6%) Query: 1 MLSILIAEPQDADLLAEIQKRTFDEDARRFQNKEED------GPPGYSSSSWQSEMMEKG 54 ++SI A DA+ L EI RTFDE+A+R+ + D PPGYSS +E+ Sbjct: 3 IISIEKATILDAEKLTEIMTRTFDEEAKRWLYGQGDVIDYNIQPPGYSSVEMMRYSIEEL 62 Query: 55 LYYKLIADGHIIGGMIVFPSPDGQEY-HLGRIFIDPLHQNRGFGQDVFHFLFSTFPNAHK 113 YK+I DG IIGG+IV S G+ Y + RIF++P++Q +G G +V + + +P+ Sbjct: 63 NCYKVIMDGKIIGGIIVTIS--GKSYGRIDRIFVEPVYQGKGIGSNVIKLIEAEYPSIRI 120 Query: 114 WTLDTPSWAVRNHYFYKKLGF 134 W L+T S + NH+FYKK+G+ Sbjct: 121 WDLETSSRQINNHHFYKKMGY 141 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.138 0.423 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,097,079,499 Number of extensions: 48494272 Number of successful extensions: 85841 Number of sequences better than 1.0e-05: 158 Number of HSP's gapped: 85718 Number of HSP's successfully gapped: 158 Length of query: 160 Length of database: 3,060,696,203 Length adjustment: 121 Effective length of query: 39 Effective length of database: 1,920,753,388 Effective search space: 74909382132 Effective search space used: 74909382132 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 125 (52.8 bits)