BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0307.0019.p (406 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A8FCG7.1 A8FCG7_BACP2 Aspartate/tyrosine/aromatic aminotransferase 379 e-103 C2XYK5.1 C2XYK5_BACCE Transaminase mtnE 378 e-103 O31665.1 MTNE_BACSU Transaminase mtnE EC=2.6.1.- 376 e-102 A7Z3X3.1 A7Z3X3_BACA2 MtnE EC=2.6.1.1 374 e-102 C3J317.1 C3J317_9BACI Aminotransferase class I and II 374 e-101 >A8FCG7.1 A8FCG7_BACP2 Aspartate/tyrosine/aromatic aminotransferase Length = 396 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 188/396 (47%), Positives = 246/396 (62%) Query: 3 MDFIPSRIVTELPGNYFNAMKAKIALYRSRGIDVIDLASGNPDQPTPEHIVAALKEAVDK 62 M+F S ++ +LP +F ++ K+ G D+I+L GNPDQPTP HIV A++EAV K Sbjct: 1 MEFQQSDVLKQLPTQFFASLVQKVQKKVEEGADIINLGQGNPDQPTPVHIVKAMQEAVAK 60 Query: 63 PENQGYPPFYGKSATLEAIAAFYQREYGVGLDPETEVAVFXXXXXXXXXXPQSLLNPGDL 122 PEN Y F G + +A AAFY+REYGV LDP TE+A+ PQ LLNPGD Sbjct: 61 PENHQYSSFRGTAKLKKAAAAFYEREYGVTLDPMTEIAILFGGKAGLVELPQCLLNPGDT 120 Query: 123 LLTVDXXXXXXXXXXXXXXXRVHTIPAYEAEGFLPDYGTVPEELARQVKLLMLNYPNNPT 182 LL D ++ T+P E F PDY +PE++ ++ KL+ LNYPNNPT Sbjct: 121 LLVPDPGYPDYWSGAVLAGAQMVTMPLLEQNDFFPDYDRLPEDVKKKAKLMYLNYPNNPT 180 Query: 183 GAVATAEFFERTLAFAARYGFPVLNDFAYGAFGFDGHKPVSLLQQPGGKEYGIETYTASK 242 GA A+ FFE T+ FA + V++DFAYG GFDG KP+S LQ G KE GIE YT SK Sbjct: 181 GATASQSFFEETVTFAKDHKLCVVHDFAYGGIGFDGEKPISFLQTDGAKETGIEIYTLSK 240 Query: 243 TFNMAGWRFGFAVGNASIIAALKHYHTQAYSTVFGAVQDXXXXXXXGPQEGVAELGRLYE 302 T+NMAGWR GFA GN S+I A++ Y + ++F A QD Q V YE Sbjct: 241 TYNMAGWRVGFAAGNPSVINAIELYQDHLFVSLFKATQDAAVEALLSDQTCVQVQNDRYE 300 Query: 303 RRRDVLVAGLRELGWEIKAPQGTFFAWFRVPEGYTAASFAACLLDEAQVAVAEGGGFGVQ 362 +RR+V +A +E+GWE+ AP+G+FFAW +VPEGYT+ SFAA LL++A V VA G GFG Sbjct: 301 KRRNVWIAACKEIGWEVTAPKGSFFAWLKVPEGYTSESFAAVLLEKAHVVVAPGNGFGTH 360 Query: 363 GREYVRVSLVNSEDKLNEAVDRIAAAGIFKRIKLSA 398 G YVRV L+ +E++L EA RIAA +F+ L+ Sbjct: 361 GEGYVRVGLLTNEERLKEAAQRIAALNLFENKPLTT 396 >C2XYK5.1 C2XYK5_BACCE Transaminase mtnE Length = 399 Score = 378 bits (971), Expect = e-103, Method: Compositional matrix adjust. Identities = 184/389 (47%), Positives = 238/389 (61%) Query: 5 FIPSRIVTELPGNYFNAMKAKIALYRSRGIDVIDLASGNPDQPTPEHIVAALKEAVDKPE 64 F PS IVT LP +F ++ AK+ + G DVI+L GNPDQPTP+HIV AL++A +K Sbjct: 7 FQPSEIVTSLPTQFFASLVAKVNKVVAAGHDVINLGQGNPDQPTPQHIVKALQDAAEKTI 66 Query: 65 NQGYPPFYGKSATLEAIAAFYQREYGVGLDPETEVAVFXXXXXXXXXXPQSLLNPGDLLL 124 + YPPF G + EA+A FY+REYGV L+P+TEVA+ P NPGD +L Sbjct: 67 HHKYPPFRGHESLKEAVATFYKREYGVELNPKTEVAILFGGKAGLVELPLCFTNPGDTIL 126 Query: 125 TVDXXXXXXXXXXXXXXXRVHTIPAYEAEGFLPDYGTVPEELARQVKLLMLNYPNNPTGA 184 D T+P FLPDY + + +A++ KL+ LNYPNNPTGA Sbjct: 127 VPDPGYPDYLSGVALAKAHFETMPLIAENNFLPDYTKIDDSIAKKAKLMFLNYPNNPTGA 186 Query: 185 VATAEFFERTLAFAARYGFPVLNDFAYGAFGFDGHKPVSLLQQPGGKEYGIETYTASKTF 244 A+ +FF+ T+ FA ++ V++DFAYGA GFDG KPVS LQ G K+ GIE YT SKTF Sbjct: 187 TASKDFFDATIHFANKHNILVVHDFAYGAIGFDGQKPVSFLQADGAKDTGIEIYTLSKTF 246 Query: 245 NMAGWRFGFAVGNASIIAALKHYHTQAYSTVFGAVQDXXXXXXXGPQEGVAELGRLYERR 304 NMAGWR FAVGN S+I + Y ++FGAVQD G Q V EL YE R Sbjct: 247 NMAGWRIAFAVGNESVIETINLLQDHMYVSIFGAVQDAAREALLGSQSCVVELVNSYESR 306 Query: 305 RDVLVAGLRELGWEIKAPQGTFFAWFRVPEGYTAASFAACLLDEAQVAVAEGGGFGVQGR 364 R+ L+ +GW + P G+FFAW VPEGYT+ F+ LL++A VAVA G GFG G Sbjct: 307 RNALIKACHSIGWNVNIPTGSFFAWLPVPEGYTSEQFSDILLEKAHVAVAPGIGFGEHGE 366 Query: 365 EYVRVSLVNSEDKLNEAVDRIAAAGIFKR 393 YVRV L+++ED+L EA++RI FK+ Sbjct: 367 GYVRVGLLHTEDRLREAINRIDKLNFFKK 395 >O31665.1 MTNE_BACSU Transaminase mtnE EC=2.6.1.- Length = 398 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 191/391 (48%), Positives = 239/391 (61%) Query: 3 MDFIPSRIVTELPGNYFNAMKAKIALYRSRGIDVIDLASGNPDQPTPEHIVAALKEAVDK 62 M F S ++ ELP +F ++ K+ + G DVI+L GNPDQPTPEHIV +K AV Sbjct: 1 MKFEQSHVLKELPKQFFASLVQKVNRKLAEGHDVINLGQGNPDQPTPEHIVEEMKRAVAD 60 Query: 63 PENQGYPPFYGKSATLEAIAAFYQREYGVGLDPETEVAVFXXXXXXXXXXPQSLLNPGDL 122 PEN Y F G A AAFY+REYG+ LDPETEVAV PQ LLNPGD Sbjct: 61 PENHKYSSFRGSYRLKSAAAAFYKREYGIDLDPETEVAVLFGGKAGLVELPQCLLNPGDT 120 Query: 123 LLTVDXXXXXXXXXXXXXXXRVHTIPAYEAEGFLPDYGTVPEELARQVKLLMLNYPNNPT 182 +L D ++ +P + FLPDY ++ E+ Q KL+ LNYPNNPT Sbjct: 121 ILVPDPGYPDYWSGVTLAKAKMEMMPLVKDRAFLPDYSSITAEIREQAKLMYLNYPNNPT 180 Query: 183 GAVATAEFFERTLAFAARYGFPVLNDFAYGAFGFDGHKPVSLLQQPGGKEYGIETYTASK 242 GAVAT+EFFE T+ FAA G V++DFAYGA GFDG KP+S LQ G K+ GIE YT SK Sbjct: 181 GAVATSEFFEDTVRFAAENGICVVHDFAYGAVGFDGCKPLSFLQTEGAKDIGIEIYTLSK 240 Query: 243 TFNMAGWRFGFAVGNASIIAALKHYHTQAYSTVFGAVQDXXXXXXXGPQEGVAELGRLYE 302 T+NMAGWR GFAVGNAS+I A+ Y + ++F A Q+ Q VAE YE Sbjct: 241 TYNMAGWRVGFAVGNASVIEAINLYQDHMFVSLFRATQEAAAEALLADQTCVAEQNARYE 300 Query: 303 RRRDVLVAGLRELGWEIKAPQGTFFAWFRVPEGYTAASFAACLLDEAQVAVAEGGGFGVQ 362 RR+ + RE+GW++ AP G+FFAW VPEGYT+ F+ LL++A VAVA G GFG Sbjct: 301 SRRNAWITACREIGWDVTAPAGSFFAWLPVPEGYTSEQFSDLLLEKANVAVAAGNGFGEY 360 Query: 363 GREYVRVSLVNSEDKLNEAVDRIAAAGIFKR 393 G YVRV L+ SE++L EA RI +F + Sbjct: 361 GEGYVRVGLLTSEERLKEAAYRIGKLNLFTQ 391 >A7Z3X3.1 A7Z3X3_BACA2 MtnE EC=2.6.1.1 Length = 398 Score = 374 bits (960), Expect = e-102, Method: Compositional matrix adjust. Identities = 191/391 (48%), Positives = 242/391 (61%) Query: 3 MDFIPSRIVTELPGNYFNAMKAKIALYRSRGIDVIDLASGNPDQPTPEHIVAALKEAVDK 62 M+F S ++ +LP +F ++ K+ G DVI+L GNPDQPTP+HIV +K AV++ Sbjct: 1 MNFEISDVLKQLPEQFFASLVQKVNQKLKEGRDVINLGQGNPDQPTPQHIVEEMKRAVER 60 Query: 63 PENQGYPPFYGKSATLEAIAAFYQREYGVGLDPETEVAVFXXXXXXXXXXPQSLLNPGDL 122 PEN Y F G + +A AAFY+REYGV LDPETEVAV PQ LLNPGD Sbjct: 61 PENHKYSSFRGAYSFKKAAAAFYEREYGVTLDPETEVAVLFGGKAGLVELPQCLLNPGDT 120 Query: 123 LLTVDXXXXXXXXXXXXXXXRVHTIPAYEAEGFLPDYGTVPEELARQVKLLMLNYPNNPT 182 +L D ++ +P E GFLPDY +PE++ + KLL LNYPNNPT Sbjct: 121 ILVPDPGYPDYWSGVALAKAKMEMMPLTEERGFLPDYSVIPEKVRSEAKLLYLNYPNNPT 180 Query: 183 GAVATAEFFERTLAFAARYGFPVLNDFAYGAFGFDGHKPVSLLQQPGGKEYGIETYTASK 242 GAVAT FFE T+ FA + G V++DFAYGA GFDGHKP+S LQ G KE GIE YT SK Sbjct: 181 GAVATEAFFEETVGFAEQNGICVVHDFAYGAVGFDGHKPLSFLQTEGAKETGIEIYTLSK 240 Query: 243 TFNMAGWRFGFAVGNASIIAALKHYHTQAYSTVFGAVQDXXXXXXXGPQEGVAELGRLYE 302 T+NMAGWR GFAVGNAS+I A+ Y + ++F A Q Q VA YE Sbjct: 241 TYNMAGWRVGFAVGNASVIEAINLYQDHMFVSLFPAAQQAAAAALLADQACVAAQNDRYE 300 Query: 303 RRRDVLVAGLRELGWEIKAPQGTFFAWFRVPEGYTAASFAACLLDEAQVAVAEGGGFGVQ 362 RR+ + R +GW++ AP G+FFAW VP+GYT+ SF+ LL++A VAVA G GFG Sbjct: 301 SRRNAWIKACRNIGWDVTAPAGSFFAWLPVPDGYTSQSFSDLLLEKADVAVAAGNGFGKW 360 Query: 363 GREYVRVSLVNSEDKLNEAVDRIAAAGIFKR 393 G Y+RV L+ SE +L EA +RI +F R Sbjct: 361 GEGYIRVGLLTSEQRLTEAAERIGKLNLFTR 391 >C3J317.1 C3J317_9BACI Aminotransferase class I and II Length = 395 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 189/393 (48%), Positives = 245/393 (62%) Query: 1 MSMDFIPSRIVTELPGNYFNAMKAKIALYRSRGIDVIDLASGNPDQPTPEHIVAALKEAV 60 M+M+ S ++ +LP +F ++ AK+ G DVI+L GNPDQPTP+HIV A++ A Sbjct: 1 MTMEIPFSELLEQLPKQFFASLVAKVGEKIKAGCDVINLGQGNPDQPTPKHIVEAMQRAA 60 Query: 61 DKPENQGYPPFYGKSATLEAIAAFYQREYGVGLDPETEVAVFXXXXXXXXXXPQSLLNPG 120 P+ Y PF G EAIAAFY REYGV +DP+ EVA+ P L+NPG Sbjct: 61 ANPKYHKYSPFQGYFFLKEAIAAFYAREYGVNIDPDREVAILFGGKAGLVELPLCLVNPG 120 Query: 121 DLLLTVDXXXXXXXXXXXXXXXRVHTIPAYEAEGFLPDYGTVPEELARQVKLLMLNYPNN 180 D++L D R+ +P GFLPDY +P +A Q KL+ LNYPNN Sbjct: 121 DVVLVPDPGYPDYWSGIALARARMEMMPLVAENGFLPDYEAIPAAVADQAKLMFLNYPNN 180 Query: 181 PTGAVATAEFFERTLAFAARYGFPVLNDFAYGAFGFDGHKPVSLLQQPGGKEYGIETYTA 240 PTGA AT EFF T+AFAA++G V++DFAYGA GFDG KPVS L+ G K+ G+E YT Sbjct: 181 PTGATATKEFFAETVAFAAKHGIAVVHDFAYGAIGFDGRKPVSFLEVDGAKDVGVEIYTF 240 Query: 241 SKTFNMAGWRFGFAVGNASIIAALKHYHTQAYSTVFGAVQDXXXXXXXGPQEGVAELGRL 300 SKT+NMAGWR FAVGN II AL+ Y ++FGA+Q+ GPQ+ V EL L Sbjct: 241 SKTYNMAGWRVAFAVGNERIIRALELLQDHLYVSLFGAIQEAAAAALLGPQDCVTELVAL 300 Query: 301 YERRRDVLVAGLRELGWEIKAPQGTFFAWFRVPEGYTAASFAACLLDEAQVAVAEGGGFG 360 YE RR+ +A L E GWE++AP G+FFAW +P+G ++A FA LL+ A VAVA G GFG Sbjct: 301 YEARRNAFIAALCEAGWEVQAPSGSFFAWLPLPKGISSAEFADMLLERAHVAVAPGIGFG 360 Query: 361 VQGREYVRVSLVNSEDKLNEAVDRIAAAGIFKR 393 G YVRV L+ E +L EA +RI G+F++ Sbjct: 361 EHGEGYVRVGLLTDEARLREAAERIGRLGLFEK 393 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.137 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,327,257,741 Number of extensions: 95334240 Number of successful extensions: 243633 Number of sequences better than 1.0e-05: 5233 Number of HSP's gapped: 233811 Number of HSP's successfully gapped: 5241 Length of query: 406 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 268 Effective length of database: 1,760,596,133 Effective search space: 471839763644 Effective search space used: 471839763644 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 132 (55.5 bits)