BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0305.0016.p (391 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B8I8W5.1 B8I8W5_CLOCE Glycosidase PH1107-related 583 e-164 B1DML7.1 B1DML7_9BACL Glycosidase PH1107-related 569 e-160 C2I9S3.1 C2I9S3_VIBCH Putative uncharacterized protein 567 e-160 A3YH15.1 A3YH15_9GAMM Putative uncharacterized protein 556 e-156 B5JIB0.1 B5JIB0_9BACT Conserved domain protein 549 e-154 >B8I8W5.1 B8I8W5_CLOCE Glycosidase PH1107-related Length = 396 Score = 583 bits (1502), Expect = e-164, Method: Compositional matrix adjust. Identities = 271/387 (70%), Positives = 311/387 (80%) Query: 4 IFQERKQKLTERYEALIGRKNEKVPYGNGIYDRYQYPLLTAEHAPLIWRYDFNPETNPYF 63 +F ER ++Y LI RKN GNGIYD+Y YP++T +H PL WRYD + TNPY Sbjct: 2 VFDERLNYFIQKYNGLIKRKNSVQEGGNGIYDKYIYPVITKDHTPLFWRYDLDRNTNPYL 61 Query: 64 AERIGVNGIFNPGAIELDGKFYIVARVEGNDRKSFFAVAESDSGVDGFRFWDHPVVLPET 123 ER+GVN FNPGAIEL+GK Y+V R+EGNDRKSFFAVAES+SG+D F FWD+PVV+PET Sbjct: 62 MERLGVNCAFNPGAIELNGKIYLVVRIEGNDRKSFFAVAESESGIDNFTFWDYPVVMPET 121 Query: 124 EDPDINVYDMRLVKHADGWIYGLFCTERKDPDAPHGDLSSAVAQCGITRTKDLKTWERLA 183 ++PDIN+YDMRLVKH DGWIYGLFCTERKDP+A GD SAVA CGI RTKDLK WERL Sbjct: 122 KNPDINIYDMRLVKHEDGWIYGLFCTERKDPEAACGDTFSAVAACGIARTKDLKLWERLP 181 Query: 184 DLKTGSAQQRNVVLHPEFVDGKYAFYTRPQXXXXXXXXXXXXXXXLSDTIENAVITSETI 243 DLKT S QQRNVVLHPEF+ GKYA YTRPQ +D++ENAVI E + Sbjct: 182 DLKTASPQQRNVVLHPEFIKGKYALYTRPQDGFIEIGKGGGIGFGYTDSMENAVIYEEIL 241 Query: 244 MDQRYYHTIKEVKNGQGPAPIKTPRGWLHIAHGVRNTAAGLRYVLYAFLSDLEEPNKVTH 303 M+ + YHTIKEVKNGQGP P+KT +GWLHIAHGVRNTAAGLRYV+YAFLSDLE P VTH Sbjct: 242 MECKEYHTIKEVKNGQGPTPLKTEKGWLHIAHGVRNTAAGLRYVVYAFLSDLEHPEIVTH 301 Query: 304 TPGGHFIAPDGEERVGDVSNVVFCNGVIARDNGDIYIYYASSDTRIHVATTTVDQMLDYV 363 PGG IAP+GEER+GDVSNVVFCNGV+AR NGD+ IYYASSDTR HVA+TT+D++LDYV Sbjct: 302 RPGGFLIAPEGEERIGDVSNVVFCNGVVARQNGDVLIYYASSDTRCHVASTTIDKLLDYV 361 Query: 364 LNTPEDPLRSYACVQQRIALIDRNLQL 390 +NTPEDPLRSYACVQQRI LI RNL+L Sbjct: 362 INTPEDPLRSYACVQQRIDLISRNLRL 388 >B1DML7.1 B1DML7_9BACL Glycosidase PH1107-related Length = 402 Score = 569 bits (1466), Expect = e-160, Method: Compositional matrix adjust. Identities = 268/388 (69%), Positives = 312/388 (80%) Query: 3 TIFQERKQKLTERYEALIGRKNEKVPYGNGIYDRYQYPLLTAEHAPLIWRYDFNPETNPY 62 TIF E+ ++L + L+ R N GNGIYDRY YP++TA HAP+ WRYD NPE+NP+ Sbjct: 4 TIFLEKLKRLHAEHRELLNRPNTPADGGNGIYDRYTYPVVTAAHAPVYWRYDLNPESNPH 63 Query: 63 FAERIGVNGIFNPGAIELDGKFYIVARVEGNDRKSFFAVAESDSGVDGFRFWDHPVVLPE 122 ERIGVN NPGAIEL+G FY+V RVEG+DRKSFFAVAES +G+DGFRFWD+P+V+PE Sbjct: 64 LMERIGVNAALNPGAIELNGMFYLVVRVEGHDRKSFFAVAESANGIDGFRFWDYPIVMPE 123 Query: 123 TEDPDINVYDMRLVKHADGWIYGLFCTERKDPDAPHGDLSSAVAQCGITRTKDLKTWERL 182 T+ PD+NVYDMRL KH DGWIYG+FCTERKDP+A GD SSAVA GI RT+DLK WERL Sbjct: 124 TDIPDVNVYDMRLTKHEDGWIYGVFCTERKDPEAKQGDTSSAVASAGIARTRDLKVWERL 183 Query: 183 ADLKTGSAQQRNVVLHPEFVDGKYAFYTRPQXXXXXXXXXXXXXXXLSDTIENAVITSET 242 DL+T S QQRNVVLHPEFV GKYAFYTRPQ LS +IE+A I ET Sbjct: 184 DDLRTPSPQQRNVVLHPEFVSGKYAFYTRPQDGFIDAGSGGGIGWGLSTSIEHATIELET 243 Query: 243 IMDQRYYHTIKEVKNGQGPAPIKTPRGWLHIAHGVRNTAAGLRYVLYAFLSDLEEPNKVT 302 I+D++ YHTIKEVKNGQG APIKT GWLHIAHGVRNTAAGLRYV+YAF++DL +P+KV Sbjct: 244 IVDEKKYHTIKEVKNGQGAAPIKTDIGWLHIAHGVRNTAAGLRYVIYAFMTDLNDPSKVI 303 Query: 303 HTPGGHFIAPDGEERVGDVSNVVFCNGVIARDNGDIYIYYASSDTRIHVATTTVDQMLDY 362 + PGGH IAPDGEERVGDVSNVVF NG+IARDNG++YIYYASSDTR HVA TTV +++DY Sbjct: 304 YAPGGHLIAPDGEERVGDVSNVVFTNGLIARDNGEVYIYYASSDTRCHVAVTTVQKLIDY 363 Query: 363 VLNTPEDPLRSYACVQQRIALIDRNLQL 390 V++TP DPLRSYACVQQR LI NL+L Sbjct: 364 VVHTPADPLRSYACVQQRSELIANNLKL 391 >C2I9S3.1 C2I9S3_VIBCH Putative uncharacterized protein Length = 390 Score = 567 bits (1461), Expect = e-160, Method: Compositional matrix adjust. Identities = 263/385 (68%), Positives = 310/385 (80%) Query: 3 TIFQERKQKLTERYEALIGRKNEKVPYGNGIYDRYQYPLLTAEHAPLIWRYDFNPETNPY 62 +IF +R L + +N + GNGI+ RY+ P+LTA HAPL WRYD NPETNP+ Sbjct: 2 SIFSQRLSDLKSDFSRNTEYENSPITPGNGIFYRYKKPVLTAAHAPLAWRYDLNPETNPF 61 Query: 63 FAERIGVNGIFNPGAIELDGKFYIVARVEGNDRKSFFAVAESDSGVDGFRFWDHPVVLPE 122 ER+G+N + NPGAIEL+GKFY+VARVEG+DRKSFFAVAES++GVDGF+FWD P V+P+ Sbjct: 62 LMERLGINAVLNPGAIELNGKFYLVARVEGHDRKSFFAVAESENGVDGFKFWDKPCVIPQ 121 Query: 123 TEDPDINVYDMRLVKHADGWIYGLFCTERKDPDAPHGDLSSAVAQCGITRTKDLKTWERL 182 T +PD NVYDMRLVKH DG+IYGLFCTERKDP+AP GD SSAVAQCGI RT DLKTW+RL Sbjct: 122 TIEPDTNVYDMRLVKHEDGYIYGLFCTERKDPEAPKGDESSAVAQCGIVRTTDLKTWQRL 181 Query: 183 ADLKTGSAQQRNVVLHPEFVDGKYAFYTRPQXXXXXXXXXXXXXXXLSDTIENAVITSET 242 DLKT SAQQRNVVLHPEFVDGKYA YTRPQ +D++E+AV+ E Sbjct: 182 PDLKTRSAQQRNVVLHPEFVDGKYALYTRPQDSFIEAGSGGGIGWGYTDSMESAVVDMEY 241 Query: 243 IMDQRYYHTIKEVKNGQGPAPIKTPRGWLHIAHGVRNTAAGLRYVLYAFLSDLEEPNKVT 302 ++D + YHTIKE KNGQGPAPIKT +GWLHIAHGVRNTAAGLRYVLY+F++ L+ P KV Sbjct: 242 VIDPKTYHTIKESKNGQGPAPIKTSQGWLHIAHGVRNTAAGLRYVLYSFMTALDNPTKVI 301 Query: 303 HTPGGHFIAPDGEERVGDVSNVVFCNGVIARDNGDIYIYYASSDTRIHVATTTVDQMLDY 362 H P G+F+AP+GEERVGDVSNVVFCNG+IARDNG+++IYYASSDTR HV TTTVDQ++DY Sbjct: 302 HRPSGYFLAPEGEERVGDVSNVVFCNGLIARDNGEVFIYYASSDTRCHVLTTTVDQLVDY 361 Query: 363 VLNTPEDPLRSYACVQQRIALIDRN 387 V+NTPEDPL SY CV QRI LI N Sbjct: 362 VMNTPEDPLTSYQCVAQRIELIKSN 386 >A3YH15.1 A3YH15_9GAMM Putative uncharacterized protein Length = 389 Score = 556 bits (1432), Expect = e-156, Method: Compositional matrix adjust. Identities = 259/388 (66%), Positives = 307/388 (79%) Query: 3 TIFQERKQKLTERYEALIGRKNEKVPYGNGIYDRYQYPLLTAEHAPLIWRYDFNPETNPY 62 ++FQ+R L ++ L + N+ GNG++ RY+ P+LTA HAPL WRYD N ETNP+ Sbjct: 2 SVFQQRLAMLQAEHQHLHAKVNQAELPGNGVFLRYKDPVLTAAHAPLTWRYDLNAETNPF 61 Query: 63 FAERIGVNGIFNPGAIELDGKFYIVARVEGNDRKSFFAVAESDSGVDGFRFWDHPVVLPE 122 ER+G+N + NPGAIELDGKFY+VARVEG+DRKSFFAVAES++GVDGF FWD P + E Sbjct: 62 LMERLGINAVLNPGAIELDGKFYMVARVEGHDRKSFFAVAESNNGVDGFTFWDKPCEIGE 121 Query: 123 TEDPDINVYDMRLVKHADGWIYGLFCTERKDPDAPHGDLSSAVAQCGITRTKDLKTWERL 182 T+ PD NVYDMRL +H DGWIYGLFCTERKDP+A GD SSAVAQCGI RTKDLK WERL Sbjct: 122 TDVPDTNVYDMRLTRHEDGWIYGLFCTERKDPNAAPGDESSAVAQCGIVRTKDLKIWERL 181 Query: 183 ADLKTGSAQQRNVVLHPEFVDGKYAFYTRPQXXXXXXXXXXXXXXXLSDTIENAVITSET 242 ADLKT SAQQRNVVLHPEFVDGKYA YTRPQ +D++ + V+ E Sbjct: 182 ADLKTNSAQQRNVVLHPEFVDGKYALYTRPQDSFIEAGKGGGIGMAFADSMTDCVVDVEH 241 Query: 243 IMDQRYYHTIKEVKNGQGPAPIKTPRGWLHIAHGVRNTAAGLRYVLYAFLSDLEEPNKVT 302 +++ + YHTIKE KNGQGPAP+KT GWLHI HGVRNTAAGLRYVLY F++DL +P KVT Sbjct: 242 VIEPKTYHTIKESKNGQGPAPMKTDNGWLHIGHGVRNTAAGLRYVLYCFMTDLIDPMKVT 301 Query: 303 HTPGGHFIAPDGEERVGDVSNVVFCNGVIARDNGDIYIYYASSDTRIHVATTTVDQMLDY 362 H P G+F+AP+GEERVGDVSNVVFCNG++ARDNG++YIYYASSDTR HV TT++DQ++DY Sbjct: 302 HRPSGYFLAPEGEERVGDVSNVVFCNGMVARDNGEVYIYYASSDTRCHVLTTSIDQLVDY 361 Query: 363 VLNTPEDPLRSYACVQQRIALIDRNLQL 390 V NT EDPL S CV+QRI LIDRNL L Sbjct: 362 VTNTLEDPLDSAGCVKQRIELIDRNLAL 389 >B5JIB0.1 B5JIB0_9BACT Conserved domain protein Length = 407 Score = 549 bits (1414), Expect = e-154, Method: Compositional matrix adjust. Identities = 257/388 (66%), Positives = 302/388 (77%) Query: 3 TIFQERKQKLTERYEALIGRKNEKVPYGNGIYDRYQYPLLTAEHAPLIWRYDFNPETNPY 62 + ++ R L E+ E + + N V GNGI+ RY+ P+LT +HAPL W YD +PETNP+ Sbjct: 2 STYETRLALLVEKQEVFLAQPNAPVEPGNGIFHRYENPVLTEKHAPLFWSYDLDPETNPH 61 Query: 63 FAERIGVNGIFNPGAIELDGKFYIVARVEGNDRKSFFAVAESDSGVDGFRFWDHPVVLPE 122 ERIGV+ FN GAI+LDGKFY+ ARVEGNDRKSFFA+AES +GVD FRFWDHPV +PE Sbjct: 62 LMERIGVHCAFNAGAIQLDGKFYVAARVEGNDRKSFFAIAESPNGVDNFRFWDHPVTMPE 121 Query: 123 TEDPDINVYDMRLVKHADGWIYGLFCTERKDPDAPHGDLSSAVAQCGITRTKDLKTWERL 182 T+ PD NVYDMRL KH DGWIYGLFCTERKDP+A DLSSAVAQCGI RTKDLKTWERL Sbjct: 122 TDVPDTNVYDMRLTKHEDGWIYGLFCTERKDPNAKPFDLSSAVAQCGIARTKDLKTWERL 181 Query: 183 ADLKTGSAQQRNVVLHPEFVDGKYAFYTRPQXXXXXXXXXXXXXXXLSDTIENAVITSET 242 DLKT SAQQRNVVLHPE+VDGKYA YTRPQ L D + NAV+ ET Sbjct: 182 PDLKTPSAQQRNVVLHPEYVDGKYALYTRPQDGFIDAGSGGGIGWGLCDDMTNAVVEKET 241 Query: 243 IMDQRYYHTIKEVKNGQGPAPIKTPRGWLHIAHGVRNTAAGLRYVLYAFLSDLEEPNKVT 302 I+D R YHTIKEVKNGQG APIKT +GWLHIAHGVR A+GLRYV+YAF++ LE+P+K+T Sbjct: 242 IIDSREYHTIKEVKNGQGDAPIKTTKGWLHIAHGVRGCASGLRYVIYAFMTSLEDPSKLT 301 Query: 303 HTPGGHFIAPDGEERVGDVSNVVFCNGVIARDNGDIYIYYASSDTRIHVATTTVDQMLDY 362 H+PGG IAP+GEE VGDV NV F NG I D+G++YIYYASSDTR+HVAT+T+D+++DY Sbjct: 302 HSPGGFLIAPEGEELVGDVMNVAFTNGTIVTDDGEVYIYYASSDTRLHVATSTIDKLVDY 361 Query: 363 VLNTPEDPLRSYACVQQRIALIDRNLQL 390 V NTP DPL S CV QR LID+NL+ Sbjct: 362 VTNTPADPLYSAMCVAQRNELIDKNLEF 389 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.138 0.424 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,460,255,342 Number of extensions: 106443869 Number of successful extensions: 200505 Number of sequences better than 1.0e-05: 192 Number of HSP's gapped: 200342 Number of HSP's successfully gapped: 195 Length of query: 391 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 253 Effective length of database: 1,760,596,133 Effective search space: 445430821649 Effective search space used: 445430821649 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 132 (55.5 bits)