BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0303.0019.p (387 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KA31.1 B3KA31_9BACI Glucose-1-phosphate adenylyltransferase EC... 604 e-171 A4J4I2.1 GLGC_DESRM Glucose-1-phosphate adenylyltransferase EC=2... 497 e-139 B7GK02.1 B7GK02_ANOFW Glucose-1-phosphate adenylyltransferase EC... 480 e-133 Q6HC16.1 GLGC_BACHK Glucose-1-phosphate adenylyltransferase EC=2... 478 e-133 Q632H2.1 GLGC_BACCZ Glucose-1-phosphate adenylyltransferase EC=2... 478 e-133 >B3KA31.1 B3KA31_9BACI Glucose-1-phosphate adenylyltransferase EC=2.7.7.27 Length = 393 Score = 604 bits (1557), Expect = e-171, Method: Compositional matrix adjust. Identities = 277/372 (74%), Positives = 334/372 (89%) Query: 1 MKKKEMVAMLLAGGQGKRLKGLTKSLAKPAVYFGGTYRIIDFPLSNCSNSGIDTVGVLTQ 60 MKKKE+VAMLLAGGQGKRLKGLTK+LAKPAVYFGGTYRIIDFPLSNCS+SGIDTVGVLTQ Sbjct: 1 MKKKEVVAMLLAGGQGKRLKGLTKTLAKPAVYFGGTYRIIDFPLSNCSHSGIDTVGVLTQ 60 Query: 61 YEPLVLHSYIGVGSDWDLNRKDGGVFVLPPHERENGSSWYRGTADAIYRNLKFVDQFDPE 120 YEPLVLHSYIGVGSDWD++R +GGVFVLPPHERE+G++WYRGTADAI+RNLKF+DQ+DPE Sbjct: 61 YEPLVLHSYIGVGSDWDMDRLNGGVFVLPPHEREDGTTWYRGTADAIFRNLKFIDQYDPE 120 Query: 121 HVLILSGDHIYKMDYHAMLQYHKARNADCTISVIDVPLEEASRFGILNTEEDLKIYEFDE 180 HVLILSGDHIYKMDY ML YHK ++ADCTISVI+V L+EA RFG++NT+ED +I+EF+E Sbjct: 121 HVLILSGDHIYKMDYDRMLAYHKEKDADCTISVIEVSLDEAKRFGMVNTDEDYRIFEFEE 180 Query: 181 KPAKPKSTLASMGVYIFKWEVLRKHLLEDGENSGSSHDFGKDIIPLMLADGQSLYAYPFE 240 KPA PKST ASMGVY+F+W++LR +LL++ + +SHDFG DI+P MLADG++LYAYPFE Sbjct: 181 KPAHPKSTTASMGVYLFRWKLLRSYLLQNADLPDTSHDFGNDILPRMLADGKTLYAYPFE 240 Query: 241 GYWRDVGTVASLWEANMDLLSDTPPLNLNDPDWRIFTRNPNQPAQYVAPGAKVSGCIINE 300 GYW+DVGT+ SLWEANMDLLS+ P L+LNDP WRI+TRNPNQPA+Y++P V +INE Sbjct: 241 GYWKDVGTIESLWEANMDLLSEQPKLDLNDPLWRIYTRNPNQPAEYISPNGIVRNSMINE 300 Query: 301 GCIVHGEVKHSVLFYGVEVGEGSVITDSVIMPKVKIGKNVKIHKAIISENTVIEDYMEIG 360 GC V GEV+HSVLFYGVEVGEGSVITDSVIMPKV+IG +V+IH+AI++E+ VI+D+ IG Sbjct: 301 GCTVCGEVEHSVLFYGVEVGEGSVITDSVIMPKVRIGSHVRIHRAIVTEDMVIQDHARIG 360 Query: 361 IERENEDEILLI 372 E+ +I+L+ Sbjct: 361 PPPEDPSQIVLV 372 >A4J4I2.1 GLGC_DESRM Glucose-1-phosphate adenylyltransferase EC=2.7.7.27 Length = 399 Score = 497 bits (1280), Expect = e-139, Method: Compositional matrix adjust. Identities = 233/368 (63%), Positives = 293/368 (79%) Query: 1 MKKKEMVAMLLAGGQGKRLKGLTKSLAKPAVYFGGTYRIIDFPLSNCSNSGIDTVGVLTQ 60 M++KE VAMLLAGGQG RL LTK LAKPAV FGG YRIIDF LSNC+NSG DTVGVLTQ Sbjct: 1 MQRKECVAMLLAGGQGSRLGVLTKKLAKPAVPFGGRYRIIDFTLSNCNNSGFDTVGVLTQ 60 Query: 61 YEPLVLHSYIGVGSDWDLNRKDGGVFVLPPHERENGSSWYRGTADAIYRNLKFVDQFDPE 120 Y+PL L++YIG+GS WDL+RK+GGV VLPP +E G WY+GTA+AIY+N++FVDQ+ P+ Sbjct: 61 YQPLALNTYIGIGSHWDLDRKNGGVTVLPPFVKEMGGEWYKGTANAIYQNIEFVDQYKPK 120 Query: 121 HVLILSGDHIYKMDYHAMLQYHKARNADCTISVIDVPLEEASRFGILNTEEDLKIYEFDE 180 ++LILSGDHIYKMDY ML +HK + AD TI+VI+VP +EAS FGI+NT +D +I EF+E Sbjct: 121 YILILSGDHIYKMDYSLMLDFHKEKQADATIAVIEVPWQEASGFGIMNTAKDARIVEFEE 180 Query: 181 KPAKPKSTLASMGVYIFKWEVLRKHLLEDGENSGSSHDFGKDIIPLMLADGQSLYAYPFE 240 KP P+S LASMGVYIF WE+L+ +L ED N SS+DFGK+IIPLML GQ ++AYPF+ Sbjct: 181 KPKVPRSNLASMGVYIFNWELLKAYLEEDERNPRSSNDFGKNIIPLMLEAGQRMFAYPFK 240 Query: 241 GYWRDVGTVASLWEANMDLLSDTPPLNLNDPDWRIFTRNPNQPAQYVAPGAKVSGCIINE 300 GYWRDVGT+ SLW+ANMDLL + P L+LND WRI++ P+QP QYVAP A+V+ +INE Sbjct: 241 GYWRDVGTIESLWQANMDLLLENPKLDLNDQKWRIYSVTPHQPPQYVAPSARVNCSLINE 300 Query: 301 GCIVHGEVKHSVLFYGVEVGEGSVITDSVIMPKVKIGKNVKIHKAIISENTVIEDYMEIG 360 GC+V G V HS+LF GV++G+GS I +SVI+ VKIGKNV + +AI+ T+IED IG Sbjct: 301 GCMVFGNVYHSILFPGVDIGKGSTIRESVILSNVKIGKNVIVERAIVGVETIIEDNCHIG 360 Query: 361 IERENEDE 368 + + E Sbjct: 361 CKENSCPE 368 >B7GK02.1 B7GK02_ANOFW Glucose-1-phosphate adenylyltransferase EC=2.7.7.27 Length = 407 Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust. Identities = 236/372 (63%), Positives = 292/372 (78%), Gaps = 1/372 (0%) Query: 1 MKKKEMVAMLLAGGQGKRLKGLTKSLAKPAVYFGGTYRIIDFPLSNCSNSGIDTVGVLTQ 60 M +K+ VAMLLAGGQG RL LTK+LAKPAV FGG YRIIDF LSNC+NSGIDTVGVLTQ Sbjct: 18 MVRKKCVAMLLAGGQGSRLSSLTKNLAKPAVPFGGKYRIIDFTLSNCANSGIDTVGVLTQ 77 Query: 61 YEPLVLHSYIGVGSDWDLNRKDGGVFVLPPHERENGSSWYRGTADAIYRNLKFVDQFDPE 120 Y+PL L++YIG+GS WDL+RK GGV VLPP+ + WY+GTA+AIY+NL +++Q+DPE Sbjct: 78 YQPLELNTYIGIGSAWDLDRKHGGVAVLPPYAESSEMRWYKGTANAIYQNLNYLEQYDPE 137 Query: 121 HVLILSGDHIYKMDYHAMLQYHKARNADCTISVIDVPLEEASRFGILNTEEDLKIYEFDE 180 +VLILSGDHIYKM+Y MLQYH + AD TISVI+VP EEASRFGI+NT E+++I EF+E Sbjct: 138 YVLILSGDHIYKMNYAHMLQYHIEKKADVTISVIEVPWEEASRFGIMNTNEEMEIVEFEE 197 Query: 181 KPAKPKSTLASMGVYIFKWEVLRKHLLEDGENSGSSHDFGKDIIPLMLADGQSLYAYPFE 240 KPA PK+ LASMG+YIFKW VL+++L D N SSHDFGKDIIPL++ + + L AYPF+ Sbjct: 198 KPAHPKNNLASMGIYIFKWSVLKEYLEMDNRNDRSSHDFGKDIIPLLIDEKKRLVAYPFK 257 Query: 241 GYWRDVGTVASLWEANMDLLSDTPPLNLNDPDWRIFTRNPNQPAQYVAPGAKVSGCIINE 300 GYW+DVGTV SLWEANMDLL DTP LNL D WRI++ NPN+P QY+AP A+V ++NE Sbjct: 258 GYWKDVGTVKSLWEANMDLLEDTPALNLFDHTWRIYSVNPNEPPQYIAPYAQVKESLVNE 317 Query: 301 GCIVHGEVKHSVLFYGVEVGEGSVITDSVIMPKVKIGKNVKIHKAIISENTVIEDYMEIG 360 GCIV G V+HSVLF GV + +G+ + D V+MP IGKNV I KAI+ N I D I Sbjct: 318 GCIVEGHVEHSVLFQGVHIAQGATVKDCVVMPNAVIGKNVYIEKAIVPPNIEIPDGTSI- 376 Query: 361 IERENEDEILLI 372 +E E++L+ Sbjct: 377 YASSSEGEVILV 388 >Q6HC16.1 GLGC_BACHK Glucose-1-phosphate adenylyltransferase EC=2.7.7.27 Length = 376 Score = 478 bits (1231), Expect = e-133, Method: Compositional matrix adjust. Identities = 231/374 (61%), Positives = 293/374 (78%) Query: 2 KKKEMVAMLLAGGQGKRLKGLTKSLAKPAVYFGGTYRIIDFPLSNCSNSGIDTVGVLTQY 61 +K++ VAMLLAGG+G RL LTK+LAKPAV FGG YRIIDF LSNC+NSGI+TVG+LTQY Sbjct: 3 QKQKCVAMLLAGGKGSRLSALTKNLAKPAVPFGGKYRIIDFTLSNCANSGIETVGILTQY 62 Query: 62 EPLVLHSYIGVGSDWDLNRKDGGVFVLPPHERENGSSWYRGTADAIYRNLKFVDQFDPEH 121 +PL LH+YIG+G+ WDL+R GGV VLPP+ +G WY GTA AIY+NL ++ Q++PE+ Sbjct: 63 QPLELHNYIGIGNAWDLDRVSGGVTVLPPYAESSGVKWYTGTASAIYQNLNYLSQYEPEY 122 Query: 122 VLILSGDHIYKMDYHAMLQYHKARNADCTISVIDVPLEEASRFGILNTEEDLKIYEFDEK 181 VLILSGDHIYKMDY ML YH + AD +ISVI+VP +EASRFGI+NT E+++I EF+EK Sbjct: 123 VLILSGDHIYKMDYSKMLDYHIEKEADVSISVIEVPWDEASRFGIMNTNEEMEIVEFEEK 182 Query: 182 PAKPKSTLASMGVYIFKWEVLRKHLLEDGENSGSSHDFGKDIIPLMLADGQSLYAYPFEG 241 P P+S LASMG+YIF W +L+++L D N SS+DFGKD++PL+L +G+ L AYPFEG Sbjct: 183 PQFPRSNLASMGIYIFNWAILKEYLEMDARNPESSNDFGKDVLPLLLDEGKKLMAYPFEG 242 Query: 242 YWRDVGTVASLWEANMDLLSDTPPLNLNDPDWRIFTRNPNQPAQYVAPGAKVSGCIINEG 301 YW+DVGTV SLWEANMDLL D LNLND DWRI++ NPN+P QY+A AKV +INEG Sbjct: 243 YWKDVGTVKSLWEANMDLLRDETSLNLNDRDWRIYSVNPNEPPQYIAEKAKVEESLINEG 302 Query: 302 CIVHGEVKHSVLFYGVEVGEGSVITDSVIMPKVKIGKNVKIHKAIISENTVIEDYMEIGI 361 C++ G+VKHSVLF GV V EGS++ DSV+MP KIGKNV I +AI+ VIED I Sbjct: 303 CVIEGDVKHSVLFQGVTVEEGSMVIDSVVMPGAKIGKNVVIERAIVGSEMVIEDGTIIRP 362 Query: 362 ERENEDEILLIDNR 375 E+ +D +L+ + + Sbjct: 363 EKNVDDVVLIAEGK 376 >Q632H2.1 GLGC_BACCZ Glucose-1-phosphate adenylyltransferase EC=2.7.7.27 Length = 376 Score = 478 bits (1231), Expect = e-133, Method: Compositional matrix adjust. Identities = 231/374 (61%), Positives = 293/374 (78%) Query: 2 KKKEMVAMLLAGGQGKRLKGLTKSLAKPAVYFGGTYRIIDFPLSNCSNSGIDTVGVLTQY 61 +K++ VAMLLAGG+G RL LTK+LAKPAV FGG YRIIDF LSNC+NSGI+TVG+LTQY Sbjct: 3 QKQKCVAMLLAGGKGSRLSALTKNLAKPAVPFGGKYRIIDFTLSNCANSGIETVGILTQY 62 Query: 62 EPLVLHSYIGVGSDWDLNRKDGGVFVLPPHERENGSSWYRGTADAIYRNLKFVDQFDPEH 121 +PL LH+YIG+G+ WDL+R GGV VLPP+ +G WY GTA AIY+NL ++ Q++PE+ Sbjct: 63 QPLELHNYIGIGNAWDLDRVSGGVTVLPPYAESSGVKWYTGTASAIYQNLNYLSQYEPEY 122 Query: 122 VLILSGDHIYKMDYHAMLQYHKARNADCTISVIDVPLEEASRFGILNTEEDLKIYEFDEK 181 VLILSGDHIYKMDY ML YH + AD +ISVI+VP +EASRFGI+NT E+++I EF+EK Sbjct: 123 VLILSGDHIYKMDYSKMLDYHIEKEADVSISVIEVPWDEASRFGIMNTNEEMEIVEFEEK 182 Query: 182 PAKPKSTLASMGVYIFKWEVLRKHLLEDGENSGSSHDFGKDIIPLMLADGQSLYAYPFEG 241 P P+S LASMG+YIF W +L+++L D N SS+DFGKD++PL+L +G+ L AYPFEG Sbjct: 183 PQFPRSNLASMGIYIFNWAILKEYLEMDARNPESSNDFGKDVLPLLLDEGKKLMAYPFEG 242 Query: 242 YWRDVGTVASLWEANMDLLSDTPPLNLNDPDWRIFTRNPNQPAQYVAPGAKVSGCIINEG 301 YW+DVGTV SLWEANMDLL D LNLND DWRI++ NPN+P QY+A AKV +INEG Sbjct: 243 YWKDVGTVKSLWEANMDLLRDETSLNLNDRDWRIYSVNPNEPPQYIAEKAKVEESLINEG 302 Query: 302 CIVHGEVKHSVLFYGVEVGEGSVITDSVIMPKVKIGKNVKIHKAIISENTVIEDYMEIGI 361 C++ G+VKHSVLF GV V EGS++ DSV+MP KIGKNV I +AI+ VIED I Sbjct: 303 CVIEGDVKHSVLFQGVTVEEGSMVIDSVVMPGAKIGKNVVIERAIVGSEMVIEDGTIIRP 362 Query: 362 ERENEDEILLIDNR 375 E+ +D +L+ + + Sbjct: 363 EKNVDDVVLIAEGK 376 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.137 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,512,259,729 Number of extensions: 114105005 Number of successful extensions: 261164 Number of sequences better than 1.0e-05: 2952 Number of HSP's gapped: 254386 Number of HSP's successfully gapped: 3068 Length of query: 387 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 249 Effective length of database: 1,760,596,133 Effective search space: 438388437117 Effective search space used: 438388437117 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 132 (55.5 bits)