BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0301.0028.p (228 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A5CZ41.1 A5CZ41_PELTS Putative uncharacterized protein 161 3e-38 Q01R66.1 Q01R66_SOLUE Methyltransferase type 11 123 2e-26 Q3K8U9.1 Q3K8U9_PSEPF Putative uncharacterized protein 117 7e-25 B4VZW7.1 B4VZW7_9CYAN Methyltransferase domain family 71 6e-11 B3E3I9.1 B3E3I9_GEOLS Methyltransferase type 11 65 6e-09 >A5CZ41.1 A5CZ41_PELTS Putative uncharacterized protein Length = 856 Score = 161 bits (408), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 87/225 (38%), Positives = 138/225 (61%), Gaps = 12/225 (5%) Query: 5 LIFEPSPEGVISLKIDIGCGSGKETGYLGIDRTAWPGVDIICDINEGIPLPDNTAEFVMA 64 L E PE ++++D+GCG K G++GIDR PGVDI+ D+N+G+PL DN+ ++++A Sbjct: 331 LFTEVVPELHRAVRVDLGCGGVKRAGFIGIDRFPLPGVDIVADMNKGLPLDDNSVDYLVA 390 Query: 65 SRVLPYVNNLFAVMAEIYRISIHKAVICILAPYAHSFPHLSNPLFKQKFDEYTPRYFTGS 124 S L + +++ +M EIYR+ HKA++CI+APY H+ +++NP KQ F+E+TPR+FT S Sbjct: 391 SHSLEHADDIIFIMQEIYRVCKHKALVCIVAPYYHTSLNMANPFHKQVFNEHTPRFFTTS 450 Query: 125 FFQPAAGAVSPEIPDYP--------APVPPFDYRLLRMELFYQYPFDDTLYEAEELEILK 176 + + P P D+R LR+E FY +P L E E+ ++ + Sbjct: 451 -HHTLIDKLDYDFPHAPNWGIAESDNSKCKMDFRCLRIEFFY-FPQYRRLDENEKRKLRQ 508 Query: 177 TLQSNVVHEIMYHFVVVKKPVTLEELADMSRK-TYPEPQALLKRR 220 T NVV +IMYH +VVK+ ++ +E+ DM++ Y EP + RR Sbjct: 509 T-SINVVDQIMYHLLVVKEDISNKEIEDMAKVIEYQEPPYITLRR 552 >Q01R66.1 Q01R66_SOLUE Methyltransferase type 11 Length = 590 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 64/187 (34%), Positives = 104/187 (55%), Gaps = 13/187 (6%) Query: 17 LKIDIGCGSGKETGYLGIDRTAWPGVDIICDINEGIPLPDNTAEFVMASRVLPYVNNLFA 76 L+ID+GCG K+ G++G+DR GVD++ D+N+ +P D++ + ++AS L +V L Sbjct: 2 LRIDLGCGMNKQAGFIGVDRYPLTGVDVVADMNQTLPFRDDSVDLLLASHSLEHVETLLT 61 Query: 77 VMAEIYRISIHKAVICILAPYAHSFPHLSNPLFKQKFDEYTPRYFTG---------SFFQ 127 M ++YRI H +CI+APY+ + +NP K F+E+TPR++T + Sbjct: 62 TMRDVYRICKHGTQLCIVAPYSEQKLNWANPYHKCAFNEHTPRFWTDYPNTPVDPREYHH 121 Query: 128 PAAGAVSPEIPDYPAPVPPFDYRLLRMELFYQYPFDDTLYEAEELEILKTLQSNVVHEIM 187 P A D P D R++RME FY +P L +E+ L+ +++V +IM Sbjct: 122 PHAFQWGLSKTDNSK--PGIDIRIVRMECFY-FPRYAGLPHSEQRR-LRHERTDVCDQIM 177 Query: 188 YHFVVVK 194 YH +V K Sbjct: 178 YHLIVWK 184 >Q3K8U9.1 Q3K8U9_PSEPF Putative uncharacterized protein Length = 678 Score = 117 bits (293), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 67/192 (34%), Positives = 100/192 (52%), Gaps = 23/192 (11%) Query: 17 LKIDIGCGSGKETGYLGIDRTAWPGVDIICDINEGIPLPDNTAEFVMASRVLPYVNNLFA 76 + +D+GCG K+ G+ GIDR P VD++ DI+ GIPL D++ + + +S L + +L Sbjct: 8 VNVDLGCGKRKQEGFFGIDRFPMPEVDMLADIDLGIPLQDDSVDMLFSSHFLEHARDLMF 67 Query: 77 VMAEIYRISIHKAVICILAPYAHSFPHLSNPLFKQKFDEYTPRYFTGSFFQPAAGAVSPE 136 M EIYR+ H A +CI+APY +++NP F+E+TPR++T P A Sbjct: 68 TMREIYRVCKHGAQVCIIAPYNEQKLNIANPYHITIFNEHTPRFWTDHTETPVDEA---- 123 Query: 137 IPDYPAPV-------------PPFDYRLLRMELFYQYPFDDTLY-EAEELEILKTLQSNV 182 DY PV P D RL+ ME FY F + L+ E+ + + NV Sbjct: 124 --DYADPVKRPWGLSKSDNSNPGLDIRLINMEFFY---FPEYLHLPLEQKRKFRNERFNV 178 Query: 183 VHEIMYHFVVVK 194 +IMY +V K Sbjct: 179 CDQIMYQLIVWK 190 >B4VZW7.1 B4VZW7_9CYAN Methyltransferase domain family Length = 290 Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 1/86 (1%) Query: 16 SLKIDIGCGSGKETGYLGIDRTAWPGVDIICDI-NEGIPLPDNTAEFVMASRVLPYVNNL 74 +LKID+GCGS K+ G LG+D + GVD I D+ E +P PD + E++ AS L +V N Sbjct: 3 NLKIDLGCGSSKKEGTLGVDIHPYSGVDYIVDLETEPLPFPDRSVEYIHASHFLEHVKNP 62 Query: 75 FAVMAEIYRISIHKAVICILAPYAHS 100 + EI R+ I A + PY S Sbjct: 63 VPIFQEISRVCIDGAKLEFWTPYGWS 88 >B3E3I9.1 B3E3I9_GEOLS Methyltransferase type 11 Length = 291 Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 3/110 (2%) Query: 17 LKIDIGCGSGKETGYLGIDRTAWPGVDIICDINEG-IPLPDNTAEFVMASRVLPYVNNLF 75 LK+DI CG K G++G+D W G DI+ D+ + P DN+ + V S + + +L Sbjct: 13 LKLDIACGKNKRPGFVGVD--LWEGADIVVDLWQFPWPFEDNSVDEVFCSHYIEHTPDLI 70 Query: 76 AVMAEIYRISIHKAVICILAPYAHSFPHLSNPLFKQKFDEYTPRYFTGSF 125 A + E+YRI A I+APY S +P + E T YF+ + Sbjct: 71 AFINELYRIMKVGAKAEIIAPYYSSIRAWQDPTHLRAISEATFYYFSKKW 120 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.322 0.140 0.426 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,449,993,364 Number of extensions: 63077429 Number of successful extensions: 147635 Number of sequences better than 1.0e-05: 11 Number of HSP's gapped: 147642 Number of HSP's successfully gapped: 11 Length of query: 228 Length of database: 3,060,696,203 Length adjustment: 131 Effective length of query: 97 Effective length of database: 1,826,543,238 Effective search space: 177174694086 Effective search space used: 177174694086 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 129 (54.3 bits)