BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0298.0003.p (283 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C4CID9.1 C4CID9_9CHLR Acetyltransferase (GNAT) family protein 121 8e-26 C2U096.1 C2U096_BACCE GCN5-related N-acetyltransferase 97 2e-18 B9ITJ8.1 B9ITJ8_BACCQ Acetyltransferase, GNAT family 94 2e-17 C2VEL7.1 C2VEL7_BACCE GCN5-related N-acetyltransferase 89 6e-16 C2PYL7.1 C2PYL7_BACCE GCN5-related N-acetyltransferase 87 2e-15 >C4CID9.1 C4CID9_9CHLR Acetyltransferase (GNAT) family protein Length = 334 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 85/248 (34%), Positives = 115/248 (46%), Gaps = 3/248 (1%) Query: 6 FRIRRPSLKDAQAVCDLVAACDTEDLGAPDIVLDDVLDMWSGFDLDHNVWVVEDTDLSLI 65 F R P DA A+ L+AAC D PD ++VL W G DL +V D Sbjct: 17 FIARAPVPADAPAIARLIAACQEADGDEPDASAEEVLRDWEGLDLGQEAVLVVAPDGEAA 76 Query: 66 GYAFLEEDSEEKLFSYGCVLPAARGRGVGASLVKSLEARASELRNTTGVPKRL--QGMIP 123 YA + +L YG V P RG G+G LV+ E + + ++ Q I Sbjct: 77 AYADVLNRRYVQLSVYGYVHPRFRGMGLGTWLVQWGEEWIQDRMHLAPAEAQVTVQHYIR 136 Query: 124 TLCEDAVRLFEAQGFAPVRYFKRMGIRLDTEPAAAILPEGLTIEPFMKGRDEQAVYDAYV 183 A+RL E G+ PVR M I LD P A PEG+T F+ G DE+A Y+A Sbjct: 137 ASSTSALRLMEQHGYRPVRDIWVMAITLDQPPPAPEWPEGITARTFVPGLDERATYEAVE 196 Query: 184 ESFADHWDFAVPPFEKWTEKTQLPTFEERWWLIARDPN-GEVAGFALGRMREDLLFIEQI 242 E+F D W FE+W TQ + WL+A + + G + G LG+ +I + Sbjct: 197 EAFGDIWGRPPSTFERWLSMTQSERKDPELWLLAVETDSGHIVGTCLGQETAGKGWIGSV 256 Query: 243 GVRRPFPG 250 GVRRP+ G Sbjct: 257 GVRRPWRG 264 >C2U096.1 C2U096_BACCE GCN5-related N-acetyltransferase Length = 310 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 66/243 (27%), Positives = 113/243 (46%), Gaps = 9/243 (3%) Query: 6 FRIRRPSLKDAQAVCDLVAACDTEDLGAPDIVLDDVLDMWSGFDLDHNVWVVEDTDLSLI 65 ++ + +D Q + L D G D ++D+ + W G D+ + +VV + + +I Sbjct: 4 LNVKATTQEDLQQILKLCTIYDQAIYGEVDTTVEDITNSWKGIDVSKSSYVVMNEE-EII 62 Query: 66 GYAFLEEDSEEKLFSYGCVLPAARGRGVGASLVKSLEARASELRNTTGVPKRLQGMIPTL 125 Y L SE + S + +G+ + LE RA EL + + RL G I T Sbjct: 63 AYGILT-GSERQFPSAVLIHSNYMNQGIEQIIWSKLEGRAKELVSNS---SRLNGKIVTQ 118 Query: 126 CEDAV--RLFEAQGFAPVRYFKRMGIRLDTEPAAAILPEGLTIEPFMKGRDEQAVYDAYV 183 + ++ E GF P R + MGI L + I P G+T+ +++G D+ ++ A+ Sbjct: 119 ANNFYEEKMLEEAGFIPTRIWWGMGIELQGNVPSPIWPNGVTVRHYIQGVDDGRLHQAFN 178 Query: 184 ESFADHWDFAVPPFEKWTEKTQLPTFEERWWLIARDPNGEVAGFALGRMRED-LLFIEQI 242 E+FADHW+ E++ ++T+ F W +A + EV GF + D I + Sbjct: 179 EAFADHWNSQPSTLEEFLQRTERDGFHPTLWSLAMAGD-EVVGFIFSKKGTDNKAEITHL 237 Query: 243 GVR 245 GVR Sbjct: 238 GVR 240 >B9ITJ8.1 B9ITJ8_BACCQ Acetyltransferase, GNAT family Length = 315 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 66/245 (26%), Positives = 115/245 (46%), Gaps = 9/245 (3%) Query: 6 FRIRRPSLKDAQAVCDLVAACDTEDLGAPDIVLDDVLDMWSGFDLDHNVWVVEDTDLSLI 65 ++ S +D + +L D G D ++D+ + W G D+ + +VV + + +I Sbjct: 8 LNVKATSQEDLLQIFNLCKIYDQAIYGEIDTTVEDITNSWKGIDVSKSSYVVMNGE-EII 66 Query: 66 GYAFLEEDSEEKLFSYGCVLPAARGRGVGASLVKSLEARASELRNTTGVPKRLQGMIPTL 125 GY L +E + S + P +G+ + LE RA+EL G LQG I T Sbjct: 67 GYGILT-GNEGQFPSAVLIDPNYMNQGIEHVIWSKLEGRATEL---VGNASCLQGTIITQ 122 Query: 126 CEDAV--RLFEAQGFAPVRYFKRMGIRLDTEPAAAILPEGLTIEPFMKGRDEQAVYDAYV 183 ++ +L GF P R + MGI L + + I +T+ ++ G D+++++ A+ Sbjct: 123 ANNSYEEKLLGEAGFIPTRIWWGMGIELKKDIPSPIWQNSVTVRHYILGVDDESLHQAFN 182 Query: 184 ESFADHWDFAVPPFEKWTEKTQLPTFEERWWLIARDPNGEVAGFALGRMRED-LLFIEQI 242 E+F DHW+ E++ ++T+ F W +A + EV GF + D I + Sbjct: 183 EAFVDHWNSKPSTLEEFLQRTKREGFHPTLWSLAMIED-EVVGFVFSKKGADNKAEITHL 241 Query: 243 GVRRP 247 GVRR Sbjct: 242 GVRRS 246 >C2VEL7.1 C2VEL7_BACCE GCN5-related N-acetyltransferase Length = 310 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 63/243 (25%), Positives = 109/243 (44%), Gaps = 9/243 (3%) Query: 6 FRIRRPSLKDAQAVCDLVAACDTEDLGAPDIVLDDVLDMWSGFDLDHNVWVVEDTDLSLI 65 ++ + +D Q + L D G D ++D+ + W G D+ + +VV + +I Sbjct: 4 LNVKATTQEDLQQILKLCTIYDQAIYGEVDTTVEDITNSWKGIDVSKSSYVVMKEE-EII 62 Query: 66 GYAFLEEDSEEKLFSYGCVLPAARGRGVGASLVKSLEARASELRNTTGVPKRLQGMIPTL 125 Y L SE + S + +G+ + LE A EL + + G I T Sbjct: 63 AYGILT-GSERQFPSAVLIHSNYMNQGIEQIIWSKLEGWAKELVSNSSCSN---GTIVTQ 118 Query: 126 CEDAV--RLFEAQGFAPVRYFKRMGIRLDTEPAAAILPEGLTIEPFMKGRDEQAVYDAYV 183 + ++ E GF P R + RMGI L + I P G+T+ ++ G D+ ++ A+ Sbjct: 119 ANNFYEEKMLEEAGFIPTRIWWRMGIELQGNVPSPIWPNGVTVRHYIPGVDDGRLHQAFN 178 Query: 184 ESFADHWDFAVPPFEKWTEKTQLPTFEERWWLIARDPNGEVAGFALGRMRED-LLFIEQI 242 E+FA+HW+ E++ ++T+ F W +A + EV GF + D I + Sbjct: 179 EAFAEHWNSQPSTLEEFLQRTERDGFHPTLWSLAMAGD-EVVGFIFSKKGTDNKTEITHL 237 Query: 243 GVR 245 GVR Sbjct: 238 GVR 240 >C2PYL7.1 C2PYL7_BACCE GCN5-related N-acetyltransferase Length = 310 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 66/242 (27%), Positives = 115/242 (47%), Gaps = 7/242 (2%) Query: 6 FRIRRPSLKDAQAVCDLVAACDTEDLGAPDIVLDDVLDMWSGFDLDHNVWVVEDTDLSLI 65 ++ + +D Q + L D G D ++D+ + W G D+ + +VV + D +I Sbjct: 4 LNVKVTTQEDLQQILKLCTIYDQAMYGEIDTTVEDITNSWKGIDISKSSYVVMNED-EII 62 Query: 66 GYAFLEEDSEEKLFSYGCVLPAARGRGVGASLVKSLEARASEL-RNTTGVPKRLQGMIPT 124 Y L +E + S V P + + + LE RA+EL N++ + + Sbjct: 63 AYGILT-GNEGQFPSAVFVNPDYLNQEIEHVIWSKLEERATELVSNSSCLNCTIVTQANN 121 Query: 125 LCEDAVRLFEAQGFAPVRYFKRMGIRLDTEPAAAILPEGLTIEPFMKGRDEQAVYDAYVE 184 E+ V L EA GF P R + MGI L ++ I P G+T+ +++ D++ ++ A+ E Sbjct: 122 FYEEKV-LGEA-GFIPTRIWWGMGIELHGNVSSPIWPNGVTVRHYIQDLDDERLHKAFNE 179 Query: 185 SFADHWDFAVPPFEKWTEKTQLPTFEERWWLIARDPNGEVAGFALGRMRED-LLFIEQIG 243 +FADHW+ E++ ++T+ F W +A + EV GF + D I +G Sbjct: 180 AFADHWNSQPSTLEEFLQRTEREGFHPTLWSLAMVED-EVVGFIFSKKGTDNKAEITHLG 238 Query: 244 VR 245 VR Sbjct: 239 VR 240 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.322 0.139 0.438 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,802,331,607 Number of extensions: 79282571 Number of successful extensions: 190694 Number of sequences better than 1.0e-05: 26 Number of HSP's gapped: 190697 Number of HSP's successfully gapped: 26 Length of query: 283 Length of database: 3,060,696,203 Length adjustment: 134 Effective length of query: 149 Effective length of database: 1,798,280,193 Effective search space: 267943748757 Effective search space used: 267943748757 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 130 (54.7 bits)