BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0294.0011.p (417 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KKE0.1 B3KKE0_9BACI UDP-N-acetylglucosamine 1-carboxyvinyltran... 711 0.0 B1DK75.1 B1DK75_9BACL UDP-N-acetylglucosamine 1-carboxyvinyltran... 658 0.0 Q9K6E5.1 MURA2_BACHD UDP-N-acetylglucosamine 1-carboxyvinyltrans... 522 e-146 Q2BG43.1 Q2BG43_9BACI UDP-N-acetylglucosamine 1-carboxyvinyltran... 522 e-146 Q5WB48.1 MURA2_BACSK UDP-N-acetylglucosamine 1-carboxyvinyltrans... 516 e-144 >B3KKE0.1 B3KKE0_9BACI UDP-N-acetylglucosamine 1-carboxyvinyltransferase Length = 415 Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/413 (85%), Positives = 369/413 (89%) Query: 5 MIGGGRPLEGVVTISGAKNSXXXXXXXXXXXESEVVLDNLPSLSDVAVYSEILEELGATV 64 MI GGRPL G VTISGAKNS ESEVVLDNLP LSDVAVY+EILEELG V Sbjct: 1 MISGGRPLRGAVTISGAKNSAIALIPAAILAESEVVLDNLPLLSDVAVYAEILEELGGQV 60 Query: 65 SWTGSQMRINPSRIVSIPMPNGPVKKLRASYYMMGALLGRFKEATIGLPGGCNFEPRPID 124 SW G+QMRI+PS I SIPMPNGPVKKLRASYYMMGA+LGRFKEA IGLPGGCNFEPRPID Sbjct: 61 SWEGNQMRIDPSDIKSIPMPNGPVKKLRASYYMMGAMLGRFKEAVIGLPGGCNFEPRPID 120 Query: 125 QHIKGFEALGATVTNDHGSIHLYAKELRGAKIYLDVSSVGATINIMLAASRAKGSTIIEN 184 QHIKGFEALGATVTN+HGSIHL+AKELRGAKIYLDVSSVGATINIMLAA++AKGSTIIEN Sbjct: 121 QHIKGFEALGATVTNEHGSIHLHAKELRGAKIYLDVSSVGATINIMLAAAKAKGSTIIEN 180 Query: 185 AAKEPEIIDVATLLNSMGAVIKGAGTETIRIEGVTEMHGCRHSIIPDRIQAGTYMIAAAA 244 AAKEPEIIDVATLLNSMGAVIKGAGTETIRIEGVTEMHGCRHSIIPDRIQAGTYMIAAAA Sbjct: 181 AAKEPEIIDVATLLNSMGAVIKGAGTETIRIEGVTEMHGCRHSIIPDRIQAGTYMIAAAA 240 Query: 245 TRGNVLIDNVIPKHLEALTAKLLEMGVNIEELDESIRVIGQGKYEHADVKALIYPGFATD 304 TRG+VLIDNVIPKHLEALTAKL+EMGV IEELDESIRVIG+ +Y+H DVKALIYPGFATD Sbjct: 241 TRGDVLIDNVIPKHLEALTAKLIEMGVGIEELDESIRVIGKDRYQHVDVKALIYPGFATD 300 Query: 305 LQSPMTSMLTQAEGVSVLSDFVYSNRFKHVPELVRMGAKIRVEGRSAIIEGSRLNAAKVK 364 LQSPMTS+LTQAEGVSVLSDFVYSNRFKHVPELVRMGAKIRVEGRSAIIEG LNAAKVK Sbjct: 301 LQSPMTSLLTQAEGVSVLSDFVYSNRFKHVPELVRMGAKIRVEGRSAIIEGGPLNAAKVK 360 Query: 365 AADLRAGAALVIAXXXXXXXXXXXXXXXFIDRGYDNLVSNLRNLGADVWRENE 417 A DLRAGAALVIA FIDRGYD+LVSNLR LGADVWRE E Sbjct: 361 ATDLRAGAALVIAGLTVPEGITEVSGVEFIDRGYDHLVSNLRELGADVWRETE 413 >B1DK75.1 B1DK75_9BACL UDP-N-acetylglucosamine 1-carboxyvinyltransferase Length = 417 Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust. Identities = 326/417 (78%), Positives = 353/417 (84%) Query: 1 MEKLMIGGGRPLEGVVTISGAKNSXXXXXXXXXXXESEVVLDNLPSLSDVAVYSEILEEL 60 MEKLMI GGRPL G V ISGAKNS ESEVVLDNLP LSDV VYSEIL++L Sbjct: 1 MEKLMIRGGRPLRGTVQISGAKNSAVALVPAAILAESEVVLDNLPHLSDVVVYSEILQDL 60 Query: 61 GATVSWTGSQMRINPSRIVSIPMPNGPVKKLRASYYMMGALLGRFKEATIGLPGGCNFEP 120 GA VSW G M+I+PSR+ S PMPNG VK LRASYY+MGA+LGRF EA IGLPGGCNFEP Sbjct: 61 GAVVSWQGDVMKIDPSRLESKPMPNGKVKLLRASYYLMGAMLGRFGEAIIGLPGGCNFEP 120 Query: 121 RPIDQHIKGFEALGATVTNDHGSIHLYAKELRGAKIYLDVSSVGATINIMLAASRAKGST 180 RPIDQHIKGFEALGATVTN+HGS+ ++AKELRGAKIYLDV SVGATINIMLAASRAKGST Sbjct: 121 RPIDQHIKGFEALGATVTNEHGSMRIHAKELRGAKIYLDVVSVGATINIMLAASRAKGST 180 Query: 181 IIENAAKEPEIIDVATLLNSMGAVIKGAGTETIRIEGVTEMHGCRHSIIPDRIQAGTYMI 240 IIENAAKEPEIIDVATLLN+MGA IKGAGTETIRIEGV MHGCRHSIIPDRIQAGTYMI Sbjct: 181 IIENAAKEPEIIDVATLLNAMGARIKGAGTETIRIEGVDSMHGCRHSIIPDRIQAGTYMI 240 Query: 241 AAAATRGNVLIDNVIPKHLEALTAKLLEMGVNIEELDESIRVIGQGKYEHADVKALIYPG 300 AAAATRG+V IDNVIPKH+EA+TAKL EMGV ++E+DESIR+IG +Y DVKAL+YPG Sbjct: 241 AAAATRGDVTIDNVIPKHMEAMTAKLEEMGVTVQEMDESIRIIGAPEYTAVDVKALVYPG 300 Query: 301 FATDLQSPMTSMLTQAEGVSVLSDFVYSNRFKHVPELVRMGAKIRVEGRSAIIEGSRLNA 360 FATDLQSPMT++L QA+GVS+LSD+VYSNRFKHVPEL RMGA IRVEGRSAIIEG L A Sbjct: 301 FATDLQSPMTTLLAQAKGVSILSDYVYSNRFKHVPELNRMGANIRVEGRSAIIEGGELFA 360 Query: 361 AKVKAADLRAGAALVIAXXXXXXXXXXXXXXXFIDRGYDNLVSNLRNLGADVWRENE 417 AKVKAADLRAGAALVIA +IDRGYDNLV NLR LGADVWRE E Sbjct: 361 AKVKAADLRAGAALVIAGLTVKEGITEITGVEYIDRGYDNLVDNLRRLGADVWRETE 417 >Q9K6E5.1 MURA2_BACHD UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 EC=2.5.1.7 Length = 428 Score = 522 bits (1344), Expect = e-146, Method: Compositional matrix adjust. Identities = 260/417 (62%), Positives = 315/417 (75%), Gaps = 2/417 (0%) Query: 1 MEKLMIGGGRPLEGVVTISGAKNSXXXXXXXXXXXESEVVLDNLPSLSDVAVYSEILEEL 60 MEKLMI GG PLEG V ISGAKNS +S V +DNLP +SDV + E+L+E+ Sbjct: 1 MEKLMIEGGTPLEGTVQISGAKNSAVALIPAAILADSTVTIDNLPDISDVRLLGELLKEI 60 Query: 61 GATVSWTGSQMRINPSRIVSIPMPNGPVKKLRASYYMMGALLGRFKEATIGLPGGCNFEP 120 G V +M I+PS++ ++P+PNG VKKLRASYY+MGA+LG+FK+A IGLPGGCN P Sbjct: 61 GGEVELADQKMVIDPSKMFAMPLPNGRVKKLRASYYLMGAMLGKFKKAVIGLPGGCNLGP 120 Query: 121 RPIDQHIKGFEALGATVTNDHGSIHLYAKELRGAKIYLDVSSVGATINIMLAASRAKGST 180 RPIDQHIKGFEALGA VTN+ G+I+L A EL+GA+IYLDV SVGATINIMLAA AKG T Sbjct: 121 RPIDQHIKGFEALGAKVTNEQGAIYLRADELKGARIYLDVVSVGATINIMLAAVLAKGRT 180 Query: 181 IIENAAKEPEIIDVATLLNSMGAVIKGAGTETIRIEGVTEMHGCRHSIIPDRIQAGTYMI 240 IIENAAKEPEIIDVATLL SMGA IKGAGT IRI+GV +HGCRHSIIPDRI+AGTYMI Sbjct: 181 IIENAAKEPEIIDVATLLTSMGARIKGAGTNVIRIDGVESLHGCRHSIIPDRIEAGTYMI 240 Query: 241 AAAATRGNVLIDNVIPKHLEALTAKLLEMGVNIEELDESIRVIGQGKYEHADVKALIYPG 300 AAA NVLIDN+IP H+E+L AKL EMGV++E LD+ +R+ + + D+K L+YPG Sbjct: 241 LAAAIGQNVLIDNIIPLHVESLIAKLREMGVDVEVLDDQVRIRNHQEKKGVDIKTLVYPG 300 Query: 301 FATDLQSPMTSMLTQAEGVSVLSDFVYSNRFKHVPELVRMGAKIRVEGRSAIIEG-SRLN 359 F TDLQ P T++LTQA G S+++D +Y+ RFKH+ EL RMGA I+VEGRSAII G ++L Sbjct: 301 FPTDLQQPATTLLTQAHGTSIVTDTIYNARFKHIDELRRMGADIKVEGRSAIINGKTKLQ 360 Query: 360 AAKVKAADLRAGAALVIAXXXXXXXXXXXXXXXFIDRGYDNLVSNLRNLGADVWREN 416 AKV+A+DLRAGA+LVIA IDRGY++L L LGA +WRE Sbjct: 361 GAKVRASDLRAGASLVIA-GLTAEGITELSGVEHIDRGYEDLEQKLIGLGAKIWREQ 416 >Q2BG43.1 Q2BG43_9BACI UDP-N-acetylglucosamine 1-carboxyvinyltransferase EC=2.5.1.7 Length = 428 Score = 522 bits (1344), Expect = e-146, Method: Compositional matrix adjust. Identities = 263/417 (63%), Positives = 314/417 (75%), Gaps = 2/417 (0%) Query: 1 MEKLMIGGGRPLEGVVTISGAKNSXXXXXXXXXXXESEVVLDNLPSLSDVAVYSEILEEL 60 MEKLMI GG PL+G V ISGAKNS +S V ++ LP +SDV + +LEE+ Sbjct: 1 MEKLMIAGGYPLKGTVRISGAKNSAVALIPATILADSPVTIEGLPDISDVQILKGLLEEI 60 Query: 61 GATVSWTGSQMRINPSRIVSIPMPNGPVKKLRASYYMMGALLGRFKEATIGLPGGCNFEP 120 G +V + + M ++PS ++S+P+PNG VKKLRASYY+MGA+LGRFK+A IGLPGGC+ P Sbjct: 61 GGSVDFADNDMTVDPSSMISMPLPNGKVKKLRASYYLMGAMLGRFKKAVIGLPGGCHLGP 120 Query: 121 RPIDQHIKGFEALGATVTNDHGSIHLYAKELRGAKIYLDVSSVGATINIMLAASRAKGST 180 RPIDQHIKGFEALGA+VTN+ G+I+L A EL+GA+IYLDV SVGATINIMLAA RAKG T Sbjct: 121 RPIDQHIKGFEALGASVTNEQGAIYLRADELKGARIYLDVVSVGATINIMLAAVRAKGKT 180 Query: 181 IIENAAKEPEIIDVATLLNSMGAVIKGAGTETIRIEGVTEMHGCRHSIIPDRIQAGTYMI 240 IIENAAKEPEIIDVATLL +MGA IKGAGT+ IRIEGV ++HGCRH+IIPDRI+AGTY+I Sbjct: 181 IIENAAKEPEIIDVATLLTNMGAKIKGAGTDVIRIEGVDQLHGCRHTIIPDRIEAGTYLI 240 Query: 241 AAAATRGNVLIDNVIPKHLEALTAKLLEMGVNIEELDESIRVIGQGKYEHADVKALIYPG 300 AA +LIDNVIP+HLE+L AKL EMGVNIE D+ I V K + D+K L+YPG Sbjct: 241 LGAAAGEGILIDNVIPQHLESLIAKLREMGVNIEAGDDQIFVSPAEKMKAVDIKTLVYPG 300 Query: 301 FATDLQSPMTSMLTQAEGVSVLSDFVYSNRFKHVPELVRMGAKIRVEGRSAIIEGS-RLN 359 F TDLQ P TS+LT AEG S+++D +Y RFKH+ EL RM A I+VEGRSAII G RL Sbjct: 301 FPTDLQQPFTSLLTGAEGTSMVTDTIYGARFKHIDELRRMNASIKVEGRSAIINGPIRLQ 360 Query: 360 AAKVKAADLRAGAALVIAXXXXXXXXXXXXXXXFIDRGYDNLVSNLRNLGADVWREN 416 AKVKA+DLRAGAALVIA IDRGY +LV L LGA +WREN Sbjct: 361 GAKVKASDLRAGAALVIA-GLKAEGITEVTGLEHIDRGYSHLVEKLNGLGATIWREN 416 >Q5WB48.1 MURA2_BACSK UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 EC=2.5.1.7 Length = 428 Score = 516 bits (1328), Expect = e-144, Method: Compositional matrix adjust. Identities = 261/415 (62%), Positives = 309/415 (74%), Gaps = 2/415 (0%) Query: 1 MEKLMIGGGRPLEGVVTISGAKNSXXXXXXXXXXXESEVVLDNLPSLSDVAVYSEILEEL 60 M+KL+I GG LEG V+ISGAKNS +S VV+DNLP +SDV + +E+L E+ Sbjct: 1 MQKLLIEGGHTLEGTVSISGAKNSAVALIPAAILADSAVVIDNLPVISDVDLLAELLREI 60 Query: 61 GATVSWTGSQMRINPSRIVSIPMPNGPVKKLRASYYMMGALLGRFKEATIGLPGGCNFEP 120 G V M I+P ++V++P+PNG VKKLRASYY+MGA+LG+FK+A IGLPGGCN P Sbjct: 61 GGDVDLGNQTMTIHPEKMVAMPLPNGRVKKLRASYYLMGAMLGKFKKAVIGLPGGCNLGP 120 Query: 121 RPIDQHIKGFEALGATVTNDHGSIHLYAKELRGAKIYLDVSSVGATINIMLAASRAKGST 180 RPIDQHIKGFEALGA VTN+ G+I+L A ELRGAKIYLDV SVGATINIMLAA RAKG T Sbjct: 121 RPIDQHIKGFEALGAQVTNEQGAIYLRANELRGAKIYLDVVSVGATINIMLAAVRAKGRT 180 Query: 181 IIENAAKEPEIIDVATLLNSMGAVIKGAGTETIRIEGVTEMHGCRHSIIPDRIQAGTYMI 240 IIENAAKEPEIIDVATLL SMGA IKGAGT IRI+GV + GCRHSIIPDRI+AGTYMI Sbjct: 181 IIENAAKEPEIIDVATLLTSMGAKIKGAGTNVIRIDGVDHLQGCRHSIIPDRIEAGTYMI 240 Query: 241 AAAATRGNVLIDNVIPKHLEALTAKLLEMGVNIEELDESIRVIGQGKYEHADVKALIYPG 300 AAA V IDNVIP HLE++TAKL EMG +EE D+ + + G + D+K L+YPG Sbjct: 241 MAAAMGRRVHIDNVIPTHLESVTAKLREMGTTVEEYDDQLIISGMDPKKGVDIKTLVYPG 300 Query: 301 FATDLQSPMTSMLTQAEGVSVLSDFVYSNRFKHVPELVRMGAKIRVEGRSAIIEG-SRLN 359 F TDLQ P TS+LT AEG S+++D +Y RFKHV EL RMGA ++VEGRS+I+ G S L Sbjct: 301 FPTDLQQPFTSLLTSAEGTSIVTDTIYDARFKHVDELRRMGASVKVEGRSSIVNGKSSLQ 360 Query: 360 AAKVKAADLRAGAALVIAXXXXXXXXXXXXXXXFIDRGYDNLVSNLRNLGADVWR 414 AKVKA+DLRAGAALVIA IDRGY++L + L LGA VWR Sbjct: 361 GAKVKASDLRAGAALVIA-GLMAEGITEVSGLEHIDRGYEHLETKLTRLGAKVWR 414 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.134 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,182,007,157 Number of extensions: 86628710 Number of successful extensions: 229591 Number of sequences better than 1.0e-05: 1935 Number of HSP's gapped: 221533 Number of HSP's successfully gapped: 1935 Length of query: 417 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 279 Effective length of database: 1,760,596,133 Effective search space: 491206321107 Effective search space used: 491206321107 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 132 (55.5 bits)