BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0291.0035.p (291 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0C4D9.1 C0C4D9_9CLOT Putative uncharacterized protein 324 5e-87 B0NKF2.1 B0NKF2_EUBSP Putative uncharacterized protein 310 7e-83 Q185A0.1 Q185A0_CLOD6 ABC transporter, ATP-binding protein 299 2e-79 A5KPQ8.1 A5KPQ8_9FIRM Putative uncharacterized protein 293 2e-77 C2K112.1 C2K112_LACRH ABC superfamily ATP binding cassette trans... 281 3e-74 >C0C4D9.1 C0C4D9_9CLOT Putative uncharacterized protein Length = 305 Score = 324 bits (831), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 156/286 (54%), Positives = 213/286 (74%), Gaps = 1/286 (0%) Query: 2 ELIIDHLTKTYGGKQALNNVSFRVGEGIHGLLGPNGAGKTTLMRLLATLLEPTSGQVEIG 61 E+ I HL + YG KQAL NV + +G+ GLLG NGAGKTTLM++LATLL + G++ I Sbjct: 17 EIEIRHLNQFYGKKQALKNVDLTIDKGMFGLLGRNGAGKTTLMKVLATLLPKSEGEINIC 76 Query: 62 GISLTDKSQIRRIVGYLPQEFAFYPGMSVLEAMDYLALLSGVKGRAERKRRIDHLLELVN 121 G+ + + +R + GYLPQEF+ YP M+V EAMDYL +LSG+ + ERK++I LL+ VN Sbjct: 77 GVPVEHAAAVRSMTGYLPQEFSMYPNMTVYEAMDYLGVLSGL-SKGERKKKILGLLKRVN 135 Query: 122 LTEQRRTRVKALSGGMKRRLGVAQAMIHEPKLLIVDEPTAGLDPEERIRFRRLLSKFAEG 181 L + R+ +VKALSGGMKRRLG+AQA++H+PK+LIVDEPTAGLDPEER+RFR LL + AE Sbjct: 136 LQDDRKKKVKALSGGMKRRLGIAQAILHDPKVLIVDEPTAGLDPEERVRFRNLLCEIAEE 195 Query: 182 RIVLLSTHVVEDVESTCEQMTVLHKGSLRYHGRIGDLTAAAAGRVWTAELDRAEWSRDSE 241 RIV+LSTH+V D+E+TCEQ+ VL+KG + Y G + +LTA A G+V++AE+ R E + Sbjct: 196 RIVILSTHIVGDIEATCEQVAVLNKGEIIYRGSVAELTAMADGKVYSAEISRNELTELKS 255 Query: 242 RFPVLSAVPEGAGMRVRVLSDEQPYPGAQQAVPSIEDAYLYLMRRE 287 ++ V S + G + VR L+D+ P+P A+ A +EDAY+YLMR E Sbjct: 256 KYIVTSMLTLGNNVIVRFLADKTPFPSARLAEAGVEDAYMYLMRGE 301 >B0NKF2.1 B0NKF2_EUBSP Putative uncharacterized protein Length = 292 Score = 310 bits (795), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 152/280 (54%), Positives = 205/280 (73%), Gaps = 1/280 (0%) Query: 5 IDHLTKTYGGKQALNNVSFRVGEGIHGLLGPNGAGKTTLMRLLATLLEPTSGQVEIGGIS 64 I+ L + YG KQAL +V+ + G+ GLLG NGAGKTTLM++LATLL+ + G+V I GI Sbjct: 7 IEGLNQYYGRKQALKDVNLYIKTGMFGLLGRNGAGKTTLMKVLATLLKKSEGKVSICGIP 66 Query: 65 LTDKSQIRRIVGYLPQEFAFYPGMSVLEAMDYLALLSGVKGRAERKRRIDHLLELVNLTE 124 + D +IRRIVGYLPQEF+ YP M+V EAMDYL +LSG+ ++ RK++I LL VNL E Sbjct: 67 VEDAREIRRIVGYLPQEFSMYPNMTVYEAMDYLGVLSGMDQKS-RKQKIPKLLYKVNLQE 125 Query: 125 QRRTRVKALSGGMKRRLGVAQAMIHEPKLLIVDEPTAGLDPEERIRFRRLLSKFAEGRIV 184 ++ +VK LSGGMKRRLG+AQA++H+PK+LIVDEPTAGLDPEER+RFR LL + A+ RIV Sbjct: 126 DQKKKVKVLSGGMKRRLGIAQAILHDPKILIVDEPTAGLDPEERVRFRNLLCEIAKDRIV 185 Query: 185 LLSTHVVEDVESTCEQMTVLHKGSLRYHGRIGDLTAAAAGRVWTAELDRAEWSRDSERFP 244 +LSTH+V D+E+TCE + VL +GSL Y G +LT+ A G+V+ AE+ R E E++ Sbjct: 186 ILSTHIVGDIEATCEDIAVLDEGSLIYQGTAAELTSLAEGKVYMAEISRKEMETLKEKYV 245 Query: 245 VLSAVPEGAGMRVRVLSDEQPYPGAQQAVPSIEDAYLYLM 284 V S + G + R +S+ +P+ A+ +EDAYLYLM Sbjct: 246 VTSMLTLGNNVMARFISETRPFESAKLCEAGVEDAYLYLM 285 >Q185A0.1 Q185A0_CLOD6 ABC transporter, ATP-binding protein Length = 290 Score = 299 bits (766), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 138/284 (48%), Positives = 200/284 (70%), Gaps = 1/284 (0%) Query: 1 MELIIDHLTKTYGGKQALNNVSFRVGEGIHGLLGPNGAGKTTLMRLLATLLEPTSGQVEI 60 M++ + +L+K +G KQAL+N++ + G+ GLLG NGAGKTT MR+LATLL T G + + Sbjct: 3 MKIAVSNLSKRFGKKQALDNINLEIDSGMFGLLGRNGAGKTTFMRILATLLSKTEGSIHM 62 Query: 61 GGISLTDKSQIRRIVGYLPQEFAFYPGMSVLEAMDYLALLSGVKGRAERKRRIDHLLELV 120 G+ + + +IR +VGYLPQ+F+ YP M+V +AMDYLA+LS + R +R++ I LL V Sbjct: 63 CGVPIENTKEIRNMVGYLPQDFSMYPNMTVYKAMDYLAVLSDIPLR-KRRKIIAKLLSKV 121 Query: 121 NLTEQRRTRVKALSGGMKRRLGVAQAMIHEPKLLIVDEPTAGLDPEERIRFRRLLSKFAE 180 NLT + +VK+LSGGM RRLG+AQA+IH P++LIVDEPTAGLDPEERIRFR LL + A Sbjct: 122 NLTNYQNVKVKSLSGGMNRRLGIAQALIHNPRVLIVDEPTAGLDPEERIRFRNLLCEIAN 181 Query: 181 GRIVLLSTHVVEDVESTCEQMTVLHKGSLRYHGRIGDLTAAAAGRVWTAELDRAEWSRDS 240 RIV+LSTH+V D+E+TCE + +L+ G + Y+G L A G+V++ E+D+ + Sbjct: 182 DRIVILSTHIVGDIEATCENVAILNSGKVIYNGSTEALAKLAEGKVYSIEVDKKDIENIK 241 Query: 241 ERFPVLSAVPEGAGMRVRVLSDEQPYPGAQQAVPSIEDAYLYLM 284 RF V+ + G +R++SD++P+ A P+IED Y+ +M Sbjct: 242 SRFIVIGMLTHGGKAILRIISDDKPFETAVNCNPTIEDGYMLIM 285 >A5KPQ8.1 A5KPQ8_9FIRM Putative uncharacterized protein Length = 291 Score = 293 bits (749), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 137/284 (48%), Positives = 196/284 (69%), Gaps = 1/284 (0%) Query: 1 MELIIDHLTKTYGGKQALNNVSFRVGEGIHGLLGPNGAGKTTLMRLLATLLEPTSGQVEI 60 ME+ I+HL K YG + L ++S + G++G+LG NGAGKTTLMR+LATL EPT+G VEI Sbjct: 1 MEISIEHLNKNYGKQNVLKDISLHIPIGMYGMLGENGAGKTTLMRILATLSEPTTGMVEI 60 Query: 61 GGISLTDKSQIRRIVGYLPQEFAFYPGMSVLEAMDYLALLSGVKGRAERKRRIDHLLELV 120 GI + K +IR+I+GYLPQEF+ YP M+V A+DYL +L+ + RKRRI+ LL+ V Sbjct: 61 NGIDIKRKKEIRKIIGYLPQEFSIYPNMTVYSALDYLGILTELPNNI-RKRRINELLKQV 119 Query: 121 NLTEQRRTRVKALSGGMKRRLGVAQAMIHEPKLLIVDEPTAGLDPEERIRFRRLLSKFAE 180 NL ++ R K LSGGMKRR G+AQA++++PK+LI+DEPTAGLDPEER+RF LLS+ A Sbjct: 120 NLEHEKNKRFKNLSGGMKRRFGIAQALLNDPKILIIDEPTAGLDPEERLRFYNLLSELAV 179 Query: 181 GRIVLLSTHVVEDVESTCEQMTVLHKGSLRYHGRIGDLTAAAAGRVWTAELDRAEWSRDS 240 RI+LLSTH+ D+E+TC + VL G++ + G+I L G+V+T + + E ++ Sbjct: 180 ERIILLSTHIASDIEATCSKAAVLSSGTVVFEGQIEKLLQLGNGKVYTTTILQNELNQFK 239 Query: 241 ERFPVLSAVPEGAGMRVRVLSDEQPYPGAQQAVPSIEDAYLYLM 284 +++ V+S G + LS+ P P+IED+Y+YL+ Sbjct: 240 QKYRVISIYQNGINVSCHFLSNAAPKKEWVSCQPTIEDSYMYLL 283 >C2K112.1 C2K112_LACRH ABC superfamily ATP binding cassette transporter, ABC protein Length = 299 Score = 281 bits (720), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 145/281 (51%), Positives = 198/281 (70%), Gaps = 4/281 (1%) Query: 5 IDHLTKTYGGKQ--ALNNVSFRVGEGIHGLLGPNGAGKTTLMRLLATLLEPTSGQVEIGG 62 I+ L K Y G+Q AL++VS + G++GLLG NGAGK+TLM++L TL +PTSG+V + G Sbjct: 6 IEQLVKQYRGRQQPALDHVSLNIQSGMYGLLGKNGAGKSTLMKILTTLEQPTSGKVLVDG 65 Query: 63 ISLTDKSQIRRIVGYLPQEFAFYPGMSVLEAMDYLALLSGVKGRAERKRRIDHLLELVNL 122 L D IRR +GYLPQ+F FYP M V++AM YLA+L+ V R E+KRRI+ LL V+L Sbjct: 66 TPLKDARSIRRKIGYLPQQFGFYPTMKVIDAMTYLAILAEVPAR-EQKRRIERLLAAVHL 124 Query: 123 TEQRRTRVKALSGGMKRRLGVAQAMIHEPKLLIVDEPTAGLDPEERIRFRRLLSKFAEGR 182 T Q +T+VKALSGGM +RLG+AQA+++EP++LIVDEPTAGLDPEERIRFR LL+ FA R Sbjct: 125 TAQAKTKVKALSGGMLQRLGIAQALVNEPRVLIVDEPTAGLDPEERIRFRNLLADFANER 184 Query: 183 IVLLSTHVVEDVESTCEQMTVLHKGSLRYHGRIGDLTAAAAGRVWTAELDRAEWSRDSER 242 +VLLSTH+V DVE+T ++ +L G L ++G +L AAAG V+ +L A+ + + Sbjct: 185 LVLLSTHIVSDVEATTNRIGILDHGRLVFNGTTDELIDAAAGHVFVGDLPVAQLKQFKTQ 244 Query: 243 FPVLSAVPEGAGMRVRVLSDEQPYPGAQQAVPSIEDAYLYL 283 + + G +RVR L+ P Q P++E+AYLYL Sbjct: 245 YQISEQTAHGQHIRVRFLA-RTPLATWQSVAPTLEEAYLYL 284 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.137 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,725,630,693 Number of extensions: 70994124 Number of successful extensions: 527717 Number of sequences better than 1.0e-05: 93854 Number of HSP's gapped: 406346 Number of HSP's successfully gapped: 100904 Length of query: 291 Length of database: 3,060,696,203 Length adjustment: 134 Effective length of query: 157 Effective length of database: 1,798,280,193 Effective search space: 282329990301 Effective search space used: 282329990301 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 130 (54.7 bits)