BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0291.0018.p
         (147 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KAL4.1 B3KAL4_9BACI Putative uncharacterized protein                161   2e-38
B3KD68.1 B3KD68_9BACI Putative uncharacterized protein                126   7e-28
A5GC92.1 A5GC92_GEOUR Putative uncharacterized protein                120   6e-26
C1U339.1 C1U339_9SPHI Putative uncharacterized protein                113   4e-24
A7GQX3.1 A7GQX3_BACCN Putative uncharacterized protein                107   4e-22

>B3KAL4.1 B3KAL4_9BACI Putative uncharacterized protein
          Length = 141

 Score =  161 bits (407), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 77/139 (55%), Positives = 94/139 (67%)

Query: 9   NMSYTDTFIRVAVDCPAETGVVPVSARPHPPVHVIQYELLSGAPYAYTHEELLYEVHVRH 68
           N +Y DTFI +A DCP ETG  P   +       I++EL++  PY YT EELLYEVH+RH
Sbjct: 2   NWNYYDTFITIAADCPVETGTQPPDKKNGKTKPGIEFELITNHPYGYTQEELLYEVHIRH 61

Query: 69  KGISEQERAERRKEIWTALFSKSHPCLRASMLPKKYGWGIHYNSEGKIAIYGKESPEYDH 128
           K I E E AER  +I    F K  PCLRASMLPKKYGWGIH+N++G+IAI   ESP+Y  
Sbjct: 62  KNIPEAELAERGNQIRDEFFMKPQPCLRASMLPKKYGWGIHFNAKGQIAIVPVESPDYRR 121

Query: 129 YTSGSADGVKLLNAMRNKK 147
           +  G+   VKLL AMRNK+
Sbjct: 122 FVEGAYGNVKLLAAMRNKR 140


>B3KD68.1 B3KD68_9BACI Putative uncharacterized protein
          Length = 136

 Score =  126 bits (316), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 64/140 (45%), Positives = 87/140 (62%), Gaps = 6/140 (4%)

Query: 8   QNMSYTDTFIRVAVDCPAETGVVPVSARPHPPVHVIQYELLSGAPYAYTHEELLYEVHVR 67
           ++M+  DTFI++A DCP    V+P +      + VIQYE+LS  PY YT E++L+EV   
Sbjct: 2   KDMNEYDTFIQIAEDCPVSEAVIPKAKGESRTIPVIQYEMLSNHPYRYTQEDVLFEVFAE 61

Query: 68  HKGISEQERAERRKEIWTALFSKSHPCLRASMLPKKYGWGIHYNSEGKIAIYGKESPEYD 127
              ISE ERA  R++     FSK  PCLR S L K+YGWGIH+++EGK+AIY  ES EY 
Sbjct: 62  RNQISETERAAAREK----FFSKGQPCLRTSSLGKRYGWGIHHDAEGKVAIYAVESDEYL 117

Query: 128 HYTSGSADGVKLLNAMRNKK 147
              +  +  +    AMR+KK
Sbjct: 118 KLMNDQS--ITQCKAMRSKK 135


>A5GC92.1 A5GC92_GEOUR Putative uncharacterized protein
          Length = 137

 Score =  120 bits (300), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 52/117 (44%), Positives = 76/117 (64%)

Query: 10  MSYTDTFIRVAVDCPAETGVVPVSARPHPPVHVIQYELLSGAPYAYTHEELLYEVHVRHK 69
           M+Y +TFI VA D   ETG+VP S      V  ++YEL++  PY  T E++ + V+V+  
Sbjct: 1   MNYVNTFIAVAADTKVETGMVPPSREGKKSVAQLEYELIAAKPYQLTQEDVQFAVYVQRT 60

Query: 70  GISEQERAERRKEIWTALFSKSHPCLRASMLPKKYGWGIHYNSEGKIAIYGKESPEY 126
           G+S QE    R  +W   FSKS  C+RAS LPK YGWG+H++++GK+A+ G E+ +Y
Sbjct: 61  GLSNQEVTANRSALWAEFFSKSMACMRASPLPKSYGWGLHFDADGKVALIGVETEKY 117


>C1U339.1 C1U339_9SPHI Putative uncharacterized protein
          Length = 137

 Score =  113 bits (283), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 56/137 (40%), Positives = 82/137 (59%), Gaps = 6/137 (4%)

Query: 11  SYTDTFIRVAVDCPAETGVVPVSARPHPPVHVIQYELLSGAPYAYTHEELLYEVHVRHKG 70
           +Y +TFI +A DCPA  G VP        V  IQYE++S  PY +T +++L++V    K 
Sbjct: 7   NYENTFIEIADDCPAAGGEVPPMKGDSKTVAGIQYEMISKNPYKFTSDDVLFQVFAERKD 66

Query: 71  ISEQERAERRKEIWTALFSKSHPCLRASMLPKKYGWGIHYNSEGKIAIYGKESPEYDHYT 130
           ++E E  + RK+     FSK   C+RAS L K+YGWGIH +  GKIA+Y  +SPEY  +T
Sbjct: 67  LTESELEDARKQ----FFSKGQACMRASPLTKRYGWGIHNDGNGKIALYACDSPEYKKFT 122

Query: 131 SGSADGVKLLNAMRNKK 147
                 +K + AM++ +
Sbjct: 123 QKP--DLKTVKAMKSSR 137


>A7GQX3.1 A7GQX3_BACCN Putative uncharacterized protein
          Length = 133

 Score =  107 bits (267), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 53/138 (38%), Positives = 79/138 (57%), Gaps = 6/138 (4%)

Query: 10  MSYTDTFIRVAVDCPAETGVVPVSARPHPPVHVIQYELLSGAPYAYTHEELLYEVHVRHK 69
           MSY +T I ++ D  A + +VPV+    P +  I+Y+L+   PY +T E++ ++ ++   
Sbjct: 1   MSYKNTLITISEDSKATSAIVPVTRNGKPTIASIEYDLIKNNPYKFTQEDVQFKTYLIKN 60

Query: 70  GISEQERAERRKEIWTALFSKSHPCLRASMLPKKYGWGIHYNSEGKIAIYGKESPEYDHY 129
            I E+   E RK+     FSK   C RAS L K YGWGIHYN +GKIAIY  +S  Y+  
Sbjct: 61  QIEEENTDELRKQ----FFSKPMACFRASPLVKNYGWGIHYNDQGKIAIYDVKSEIYNQL 116

Query: 130 TSGSADGVKLLNAMRNKK 147
              + D +  L  MR+K+
Sbjct: 117 L--NQDKITKLKGMRSKR 132


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.316    0.133    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 940,043,055
Number of extensions: 37157543
Number of successful extensions: 78109
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 78098
Number of HSP's successfully gapped: 13
Length of query: 147
Length of database: 3,060,696,203
Length adjustment: 110
Effective length of query: 37
Effective length of database: 2,024,384,553
Effective search space: 74902228461
Effective search space used: 74902228461
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 125 (52.8 bits)