BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0291.0015.p (205 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KA61.1 B3KA61_9BACI Beta-lactamase domain protein 261 2e-68 B8FV79.1 B8FV79_DESHD Beta-lactamase domain protein 247 5e-64 Q24XK8.1 Q24XK8_DESHY Putative uncharacterized protein 245 2e-63 B1HQ40.1 B1HQ40_LYSSC Protein yflN 238 2e-61 Q2B9F1.1 Q2B9F1_9BACI Metallo-beta-lactamase family protein 236 1e-60 >B3KA61.1 B3KA61_9BACI Beta-lactamase domain protein Length = 273 Score = 261 bits (668), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 126/205 (61%), Positives = 156/205 (76%), Gaps = 8/205 (3%) Query: 1 VLTHGHFDHVGNLKELMEEWQEVPVYAHPLELPYLTGLQDYPPADPAVGGGLMATVSPLY 60 VLTHGHFDHVGN+KEL + W VPVYAHP ELP+LTG +DYPP DP+VGGGLMA V+P+Y Sbjct: 72 VLTHGHFDHVGNVKELADRWN-VPVYAHPSELPFLTGQEDYPPGDPSVGGGLMARVAPMY 130 Query: 61 PHRGLHLGEGVHPLPEDGSVPGAKGWTWVHTPGHSPGHISLFRPADKVLISGDAVITVKQ 120 P++ + LG + PLPEDGSVPG + W+ TPGHSPGHISL+R D+VL++GDAVITVKQ Sbjct: 131 PNKAIDLGSRIRPLPEDGSVPGLPEFKWLPTPGHSPGHISLYRERDRVLVAGDAVITVKQ 190 Query: 121 ESAFAVITQHKELHGPPAYFTTDWIEAEKSVRKLALLDPQMVIPGHGLPMAGPELSGXXX 180 ESA AVI Q KELHGPP YFT DW A +SVR+LA L+P++++ GHG+ M G E Sbjct: 191 ESALAVIGQEKELHGPPMYFTPDWDLARESVRRLASLNPEILVTGHGVSMRGEE------ 244 Query: 181 XLSAQFAHLCKTFKELSVPSQGKFV 205 L+ A L + F L+VP QG++V Sbjct: 245 -LTTSLARLGRDFDRLAVPEQGRYV 268 >B8FV79.1 B8FV79_DESHD Beta-lactamase domain protein Length = 275 Score = 247 bits (630), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 120/205 (58%), Positives = 152/205 (74%), Gaps = 8/205 (3%) Query: 1 VLTHGHFDHVGNLKELMEEWQEVPVYAHPLELPYLTGLQDYPPADPAVGGGLMATVSPLY 60 +LTHGHFDHVG++KEL E W +VPVYAH LELPYLTG +DYP ADP VGGGL++ +S + Sbjct: 78 ILTHGHFDHVGSVKELAEYW-DVPVYAHTLELPYLTGKKDYPLADPGVGGGLVSGISTTF 136 Query: 61 PHRGLHLGEGVHPLPEDGSVPGAKGWTWVHTPGHSPGHISLFRPADKVLISGDAVITVKQ 120 PH + LG + PLP+ G VPG GW WVHTPGH+ GHISLFR D+VL++ DA T KQ Sbjct: 137 PHTRIDLGYRIFPLPDHGEVPGMPGWQWVHTPGHTDGHISLFREKDRVLLAADAFTTTKQ 196 Query: 121 ESAFAVITQHKELHGPPAYFTTDWIEAEKSVRKLALLDPQMVIPGHGLPMAGPELSGXXX 180 ES ++V+TQ +++ GPP YFTTDW+EAEKSV++L L P +VIP HG PMAG E Sbjct: 197 ESLWSVMTQEEQMGGPPKYFTTDWVEAEKSVKRLEELKPSLVIPSHGKPMAGDE------ 250 Query: 181 XLSAQFAHLCKTFKELSVPSQGKFV 205 LS +L + F+E++VP QG+FV Sbjct: 251 -LSHHLVYLAQHFQEIAVPEQGRFV 274 >Q24XK8.1 Q24XK8_DESHY Putative uncharacterized protein Length = 275 Score = 245 bits (625), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 119/205 (58%), Positives = 152/205 (74%), Gaps = 8/205 (3%) Query: 1 VLTHGHFDHVGNLKELMEEWQEVPVYAHPLELPYLTGLQDYPPADPAVGGGLMATVSPLY 60 +LTHGHFDHVG++KEL E W +VPVYAH LELPYLTG +DYP ADP VGGGL++ +S + Sbjct: 78 ILTHGHFDHVGSVKELAEYW-DVPVYAHTLELPYLTGKKDYPLADPGVGGGLVSGISTTF 136 Query: 61 PHRGLHLGEGVHPLPEDGSVPGAKGWTWVHTPGHSPGHISLFRPADKVLISGDAVITVKQ 120 PH + L + PLP+ G+VPG GW WVHTPGH+ GHISLFR D+VL++ DA T KQ Sbjct: 137 PHTRIDLEYRIFPLPDHGAVPGMPGWQWVHTPGHTDGHISLFREKDRVLLAADAFTTTKQ 196 Query: 121 ESAFAVITQHKELHGPPAYFTTDWIEAEKSVRKLALLDPQMVIPGHGLPMAGPELSGXXX 180 ES ++V+TQ +++ GPP YFTTDW+EAEKSV++L L P +VIP HG PMAG E Sbjct: 197 ESLWSVMTQEEQIGGPPKYFTTDWVEAEKSVKRLEELKPSLVIPSHGKPMAGDE------ 250 Query: 181 XLSAQFAHLCKTFKELSVPSQGKFV 205 LS +L + F+E++VP QG+FV Sbjct: 251 -LSRHLVYLAQHFQEIAVPEQGRFV 274 >B1HQ40.1 B1HQ40_LYSSC Protein yflN Length = 281 Score = 238 bits (608), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 112/205 (54%), Positives = 145/205 (70%), Gaps = 8/205 (3%) Query: 1 VLTHGHFDHVGNLKELMEEWQEVPVYAHPLELPYLTGLQDYPPADPAVGGGLMATVSPLY 60 +LTHGHFDHVG + EL++ W +PVYAH LE+PYLTG QDYP ADPAV GL+A +SP++ Sbjct: 84 ILTHGHFDHVGGIIELIKRWN-IPVYAHALEIPYLTGTQDYPVADPAVSSGLVAKMSPIF 142 Query: 61 PHRGLHLGEGVHPLPEDGSVPGAKGWTWVHTPGHSPGHISLFRPADKVLISGDAVITVKQ 120 P+ ++LGE + +P DGSVP + W+HTPGH+ GHISL+R DKVLI GDA +TVKQ Sbjct: 143 PNEAINLGENIQAIPSDGSVPFMSDFQWIHTPGHTSGHISLYREKDKVLIVGDAFVTVKQ 202 Query: 121 ESAFAVITQHKELHGPPAYFTTDWIEAEKSVRKLALLDPQMVIPGHGLPMAGPELSGXXX 180 ES + VITQ KE+ GPP Y TT+W A KSV KL L P + I GHGLPM G E Sbjct: 203 ESLYKVITQTKEISGPPRYLTTNWQAARKSVEKLEALKPSVAITGHGLPMEGKE------ 256 Query: 181 XLSAQFAHLCKTFKELSVPSQGKFV 205 L+ + L F+++++P QGK++ Sbjct: 257 -LARELKKLVDHFEQIALPKQGKYL 280 >Q2B9F1.1 Q2B9F1_9BACI Metallo-beta-lactamase family protein Length = 269 Score = 236 bits (601), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 115/205 (56%), Positives = 144/205 (70%), Gaps = 8/205 (3%) Query: 1 VLTHGHFDHVGNLKELMEEWQEVPVYAHPLELPYLTGLQDYPPADPAVGGGLMATVSPLY 60 ++TH HFDH+G L+ ++ +W +VPVYAH ELPYLTG + YPPADPAVG GLMA +SPLY Sbjct: 72 LMTHAHFDHIGGLRAILSKW-DVPVYAHRAELPYLTGKETYPPADPAVGRGLMALISPLY 130 Query: 61 PHRGLHLGEGVHPLPEDGSVPGAKGWTWVHTPGHSPGHISLFRPADKVLISGDAVITVKQ 120 P R + +GE LPED S+PG GW W+HTPGH+PGH+S FR D VL++GDA ITVKQ Sbjct: 131 PRRPIDIGESAKELPEDASLPGLPGWRWIHTPGHTPGHVSFFRDDDGVLLAGDAFITVKQ 190 Query: 121 ESAFAVITQHKELHGPPAYFTTDWIEAEKSVRKLALLDPQMVIPGHGLPMAGPELSGXXX 180 ES AV++Q KE+HGPPAYFT DW A +S+RKLA L+P+ + GHG P G E Sbjct: 191 ESLMAVMSQAKEIHGPPAYFTPDWDTAGQSIRKLAALNPKAALTGHGQPFYGKE------ 244 Query: 181 XLSAQFAHLCKTFKELSVPSQGKFV 205 L+ L K + VP QGK+V Sbjct: 245 -LTEGLEKLTKGHETFVVPKQGKYV 268 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.138 0.441 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,425,630,535 Number of extensions: 61837281 Number of successful extensions: 131073 Number of sequences better than 1.0e-05: 526 Number of HSP's gapped: 131074 Number of HSP's successfully gapped: 526 Length of query: 205 Length of database: 3,060,696,203 Length adjustment: 129 Effective length of query: 76 Effective length of database: 1,845,385,268 Effective search space: 140249280368 Effective search space used: 140249280368 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 128 (53.9 bits)