BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0290.0079.p (147 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KG17.1 B3KG17_9BACI NUDIX hydrolase 182 6e-45 B1DFR1.1 B1DFR1_9BACL NUDIX hydrolase 168 1e-40 C0ZB53.1 C0ZB53_BREBN Putative uncharacterized protein 132 1e-29 C1XKU7.1 C1XKU7_MEIRU ADP-ribose pyrophosphatase 92 2e-17 C1XYH3.1 C1XYH3_9DEIN Zn-finger containing NTP pyrophosphohydrolase 87 4e-16 >B3KG17.1 B3KG17_9BACI NUDIX hydrolase Length = 151 Score = 182 bits (463), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 88/141 (62%), Positives = 108/141 (76%) Query: 3 MAYKQISAGGVVYRQGADGLEVQLIVDRYGRIALPKGKMEQGETVEETALREIREETGTV 62 MAY QISAGGVVYR L++QLI+DRYG+ +LPKGKME GETVE+TALREIREETG V Sbjct: 1 MAYTQISAGGVVYRYYEGALQIQLILDRYGKTSLPKGKMEAGETVEQTALREIREETGIV 60 Query: 63 GAIKAPIDVIKYTFQHPVHGLVNKEVHYFLVESVGGETKAQTEEINAVEWHDPAAAWIRG 122 G+I +P+D+I Y + HP G V+KEVHY+LV++ GG K Q EEIN V+W +P AAW + Sbjct: 61 GSITSPVDIIAYKYHHPEFGQVDKEVHYYLVKAEGGILKPQIEEINGVDWFEPLAAWRKQ 120 Query: 123 TGNSYSNNIQVLRKALSLLGV 143 N Y+NN +LRKAL LL V Sbjct: 121 RSNGYNNNDIILRKALMLLEV 141 >B1DFR1.1 B1DFR1_9BACL NUDIX hydrolase Length = 143 Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 85/139 (61%), Positives = 104/139 (74%), Gaps = 1/139 (0%) Query: 7 QISAGGVVYRQGADG-LEVQLIVDRYGRIALPKGKMEQGETVEETALREIREETGTVGAI 65 +ISAGGVVYR+ G L++QLI DRYG+++LPKGKME GETVE+TALREI EETG +GAI Sbjct: 3 EISAGGVVYRRNEAGILQIQLIQDRYGKVSLPKGKMEPGETVEQTALREIAEETGMIGAI 62 Query: 66 KAPIDVIKYTFQHPVHGLVNKEVHYFLVESVGGETKAQTEEINAVEWHDPAAAWIRGTGN 125 PID IKY + G +NKEVHY+LVE+VGG +AQ EEI VEW +P AW R + Sbjct: 63 VKPIDQIKYQYHDANKGTINKEVHYYLVEAVGGSLQAQVEEIRGVEWFEPLEAWRRQKQS 122 Query: 126 SYSNNIQVLRKALSLLGVK 144 Y NN +++ ALSLLGVK Sbjct: 123 GYENNNRIVAGALSLLGVK 141 >C0ZB53.1 C0ZB53_BREBN Putative uncharacterized protein Length = 142 Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 67/139 (48%), Positives = 87/139 (62%), Gaps = 1/139 (0%) Query: 7 QISAGGVVYRQGADGLEVQLIVDRYGRIALPKGKMEQGETVEETALREIREETGTVGAIK 66 +ISAGGVVY++ + LI DRYG++ L KGK E GET+EETALRE+ EETG G + Sbjct: 3 EISAGGVVYQKQDAEYMLLLIEDRYGKVTLAKGKQEMGETIEETALREVLEETGVAGRLG 62 Query: 67 APIDVIKYTFQHPVHG-LVNKEVHYFLVESVGGETKAQTEEINAVEWHDPAAAWIRGTGN 125 + +D+I Y + HPV G ++KEVHY+LVE+ E Q EEIN V WH AW Sbjct: 63 SKLDMITYVYTHPVTGESIDKEVHYYLVEAYNTEITVQLEEINDVHWHSAKEAWDLQLQR 122 Query: 126 SYSNNIQVLRKALSLLGVK 144 Y NN + R A LG++ Sbjct: 123 GYRNNDSIFRLAFEQLGIE 141 >C1XKU7.1 C1XKU7_MEIRU ADP-ribose pyrophosphatase Length = 164 Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 60/138 (43%), Positives = 80/138 (57%), Gaps = 9/138 (6%) Query: 9 SAGGVVYRQ--GADGLEVQLIVDRYGRI-ALPKGKMEQGETVEETALREIREETGTVGAI 65 SAGGVV R+ G GLEV LI + GR+ +LPKG++E GE +TA+RE+REETG + Sbjct: 19 SAGGVVLRERPGGKGLEVLLIAIKDGRVWSLPKGQVEPGERYPQTAVREVREETGIEARV 78 Query: 66 KAPIDVIKYTF---QHPVHGLVNKEVHYFLVESVGGETKAQTEEINAVEWHDPAAAWIRG 122 AP+ I+Y F V V KEVH+FL+ VGG + Q EE++ V W A R Sbjct: 79 LAPLGSIRYHFTVKDDGVQTTVTKEVHHFLMGYVGGTPRPQKEEVDGVAWFPVREALKR- 137 Query: 123 TGNSYSNNIQVLRKALSL 140 S+ N + KAL+ Sbjct: 138 --LSHQNERNAVLKALAC 153 >C1XYH3.1 C1XYH3_9DEIN Zn-finger containing NTP pyrophosphohydrolase Length = 142 Score = 87.4 bits (215), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 56/131 (42%), Positives = 72/131 (54%), Gaps = 7/131 (5%) Query: 13 VVYRQGADGLEVQLIVDRYGRI-ALPKGKMEQGETVEETALREIREETGTVGAIKAPIDV 71 +V R G GLEV L+ R G + +LPKG++E GE ETA+RE+REET I AP+ Sbjct: 1 MVLRMGRRGLEVLLVTLRQGAVWSLPKGQVEPGERYAETAVREVREETSVEARILAPLGR 60 Query: 72 IKYTF---QHPVHGLVNKEVHYFLVESVGGETKAQTEEINAVEWHDPAAAWIRGTGNSYS 128 I+Y F + V KEVHYFL+ GE K Q E+ EW A R SY+ Sbjct: 61 IRYHFTVRDEAIPVAVTKEVHYFLMRYQAGEPKPQLAEVEGAEWVPVRVALAR---LSYA 117 Query: 129 NNIQVLRKALS 139 N +L +ALS Sbjct: 118 NERDMLHRALS 128 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.315 0.133 0.378 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 871,948,651 Number of extensions: 33787548 Number of successful extensions: 74432 Number of sequences better than 1.0e-05: 227 Number of HSP's gapped: 74719 Number of HSP's successfully gapped: 227 Length of query: 147 Length of database: 3,060,696,203 Length adjustment: 110 Effective length of query: 37 Effective length of database: 2,024,384,553 Effective search space: 74902228461 Effective search space used: 74902228461 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 125 (52.8 bits)