BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0290.0069.p (253 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KE37.1 B3KE37_9BACI IG hypothetical 18063 442 e-122 A9VVB4.1 A9VVB4_BACWK IG hypothetical 18063 386 e-106 C2TZM2.1 C2TZM2_BACCE Putative uncharacterized protein 385 e-105 C2X0K8.1 C2X0K8_BACCE Putative uncharacterized protein 385 e-105 C2UXD8.1 C2UXD8_BACCE Putative uncharacterized protein 385 e-105 >B3KE37.1 B3KE37_9BACI IG hypothetical 18063 Length = 272 Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust. Identities = 216/252 (85%), Positives = 233/252 (92%) Query: 1 MKEHSLFLGLGFRAEDTQLKNEANQFYAIFEDIERRAYEFQPDTDPHIIQAFNTEVRVAA 60 MKEHS FL LGFR EDTQL NEANQF+AIFEDIERR++ +Q DTDP I+ FN+EV AA Sbjct: 20 MKEHSFFLRLGFRCEDTQLINEANQFHAIFEDIERRSHAYQADTDPQTIRQFNSEVHNAA 79 Query: 61 TNIWAFKRKVLGLILQCKLPGQTNFPLLVDHVSREANYFRNRLEELNSGTLEPLPDAIID 120 +IWAFKRKVLGLIL+C+LPG TNFPLLVDHVSREANYFRNRLEELN+G LEPLPDAIID Sbjct: 80 AHIWAFKRKVLGLILRCQLPGGTNFPLLVDHVSREANYFRNRLEELNNGRLEPLPDAIID 139 Query: 121 ENVFFLKIMADHAKFISHLLDPSERKLVDQAREFSNDFDKLVFQAVDLSHMRPQSQTVPL 180 ENVFFLKIMADHAKFI HLLDPSERKLV+QAREFS DFD L+FQA+DLS MRPQSQT PL Sbjct: 140 ENVFFLKIMADHAKFIGHLLDPSERKLVEQAREFSQDFDTLMFQAIDLSSMRPQSQTHPL 199 Query: 181 LSQFVDENRVSVKSLRDFKKTARDLIEECRIKSIIHPLLADHVFREAERFLFILDMFDQS 240 LSQFVDENRVSVKSLRDFKKTARDLIEECRIKSIIHPLLADHVFREAERFLFILDMFD+S Sbjct: 200 LSQFVDENRVSVKSLRDFKKTARDLIEECRIKSIIHPLLADHVFREAERFLFILDMFDRS 259 Query: 241 LSGVKVNKREIL 252 LSG+KVNK+EI+ Sbjct: 260 LSGMKVNKKEIM 271 >A9VVB4.1 A9VVB4_BACWK IG hypothetical 18063 Length = 282 Score = 386 bits (992), Expect = e-106, Method: Compositional matrix adjust. Identities = 186/245 (75%), Positives = 209/245 (85%) Query: 1 MKEHSLFLGLGFRAEDTQLKNEANQFYAIFEDIERRAYEFQPDTDPHIIQAFNTEVRVAA 60 MKEHS FL LGFR EDTQL EANQFY +FE IE+ AY + +TDP I+ FN+EV+ AA Sbjct: 34 MKEHSFFLRLGFRCEDTQLIEEANQFYRLFEHIEQIAYSYTNETDPGQIKRFNSEVQQAA 93 Query: 61 TNIWAFKRKVLGLILQCKLPGQTNFPLLVDHVSREANYFRNRLEELNSGTLEPLPDAIID 120 TNIW FKRK+LGLIL CKLPGQ NFPLLVDH SREANYFR RL ELN G L+ LPDAII Sbjct: 94 TNIWGFKRKILGLILTCKLPGQNNFPLLVDHTSREANYFRKRLIELNEGKLDALPDAIIK 153 Query: 121 ENVFFLKIMADHAKFISHLLDPSERKLVDQAREFSNDFDKLVFQAVDLSHMRPQSQTVPL 180 ENVFFL+IMADHAKFI HLLDPSERKLVD AR FSNDFD+L++QA+DL M+PQSQTVPL Sbjct: 154 ENVFFLRIMADHAKFIGHLLDPSERKLVDTARNFSNDFDELMYQAIDLESMKPQSQTVPL 213 Query: 181 LSQFVDENRVSVKSLRDFKKTARDLIEECRIKSIIHPLLADHVFREAERFLFILDMFDQS 240 L QF+D+NRVSV SLRDFKKTARDLIE+C+IKSIIHPLLADHVFREA+RFL I+DMFD Sbjct: 214 LDQFLDQNRVSVTSLRDFKKTARDLIEQCKIKSIIHPLLADHVFREADRFLEIIDMFDAH 273 Query: 241 LSGVK 245 L+ +K Sbjct: 274 LTNIK 278 >C2TZM2.1 C2TZM2_BACCE Putative uncharacterized protein Length = 283 Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust. Identities = 186/249 (74%), Positives = 210/249 (84%) Query: 1 MKEHSLFLGLGFRAEDTQLKNEANQFYAIFEDIERRAYEFQPDTDPHIIQAFNTEVRVAA 60 MKEHS FL LGFR EDTQL EANQFY +FE IE+ AY + +TDP I+ FN+EV+ AA Sbjct: 34 MKEHSFFLRLGFRCEDTQLIEEANQFYRLFEHIEQIAYSYTNETDPEQIKRFNSEVQQAA 93 Query: 61 TNIWAFKRKVLGLILQCKLPGQTNFPLLVDHVSREANYFRNRLEELNSGTLEPLPDAIID 120 TNIW FKRK+LGLIL CKLPGQ NFPLLVDH SREA+YFR RL ELN G L+ LPDAII Sbjct: 94 TNIWGFKRKILGLILTCKLPGQNNFPLLVDHTSREADYFRKRLIELNEGKLDALPDAIIK 153 Query: 121 ENVFFLKIMADHAKFISHLLDPSERKLVDQAREFSNDFDKLVFQAVDLSHMRPQSQTVPL 180 ENVFFL+IMADHAKFI HLLDPSERKLVD AR FSNDFD+L++QA+DL M+PQSQTVPL Sbjct: 154 ENVFFLRIMADHAKFIGHLLDPSERKLVDTARNFSNDFDELMYQAIDLESMKPQSQTVPL 213 Query: 181 LSQFVDENRVSVKSLRDFKKTARDLIEECRIKSIIHPLLADHVFREAERFLFILDMFDQS 240 L QF+D+NRVSV SLRDFKKTARDLIE+C+IKSIIHPLLADHVFREA+RFL I+DMFD Sbjct: 214 LDQFLDQNRVSVTSLRDFKKTARDLIEQCKIKSIIHPLLADHVFREADRFLEIIDMFDAH 273 Query: 241 LSGVKVNKR 249 L+ +K R Sbjct: 274 LTNIKSQPR 282 >C2X0K8.1 C2X0K8_BACCE Putative uncharacterized protein Length = 283 Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust. Identities = 185/249 (74%), Positives = 210/249 (84%) Query: 1 MKEHSLFLGLGFRAEDTQLKNEANQFYAIFEDIERRAYEFQPDTDPHIIQAFNTEVRVAA 60 MKEHS FL LGFR EDTQL EANQFY +FE IE+ AY + +TDP I+ FN+EV+ AA Sbjct: 34 MKEHSFFLRLGFRCEDTQLIEEANQFYRLFEHIEQIAYSYTNETDPEQIKRFNSEVQQAA 93 Query: 61 TNIWAFKRKVLGLILQCKLPGQTNFPLLVDHVSREANYFRNRLEELNSGTLEPLPDAIID 120 TNIW FKRK+LGLIL CKLPGQ NFPLLVDH SREA+YFR RL ELN G L+ LPDAII Sbjct: 94 TNIWGFKRKILGLILTCKLPGQNNFPLLVDHTSREADYFRKRLIELNEGKLDALPDAIIK 153 Query: 121 ENVFFLKIMADHAKFISHLLDPSERKLVDQAREFSNDFDKLVFQAVDLSHMRPQSQTVPL 180 ENVFFL+IMADHAKFI HLLDPSERKLVD AR FSNDFD+L++QA+DL M+PQSQTVPL Sbjct: 154 ENVFFLRIMADHAKFIGHLLDPSERKLVDTARNFSNDFDELMYQAIDLESMKPQSQTVPL 213 Query: 181 LSQFVDENRVSVKSLRDFKKTARDLIEECRIKSIIHPLLADHVFREAERFLFILDMFDQS 240 L QF+D+NRVSV SLRDFKKTARDLIE+C++KSIIHPLLADHVFREA+RFL I+DMFD Sbjct: 214 LDQFLDQNRVSVTSLRDFKKTARDLIEQCKVKSIIHPLLADHVFREADRFLEIIDMFDAH 273 Query: 241 LSGVKVNKR 249 L+ +K R Sbjct: 274 LTNIKSQPR 282 >C2UXD8.1 C2UXD8_BACCE Putative uncharacterized protein Length = 283 Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust. Identities = 185/249 (74%), Positives = 210/249 (84%) Query: 1 MKEHSLFLGLGFRAEDTQLKNEANQFYAIFEDIERRAYEFQPDTDPHIIQAFNTEVRVAA 60 MKEHS FL LGFR EDTQL EANQFY +FE IE+ AY + +TDP I+ FN+EV+ AA Sbjct: 34 MKEHSFFLRLGFRCEDTQLIEEANQFYRLFEHIEQIAYSYTNETDPEQIKRFNSEVQQAA 93 Query: 61 TNIWAFKRKVLGLILQCKLPGQTNFPLLVDHVSREANYFRNRLEELNSGTLEPLPDAIID 120 TNIW FKRK+LGLIL CKLPGQ NFPLLVDH SREA+YFR RL ELN G L+ LPDAII Sbjct: 94 TNIWGFKRKILGLILTCKLPGQNNFPLLVDHTSREADYFRKRLIELNEGKLDALPDAIIK 153 Query: 121 ENVFFLKIMADHAKFISHLLDPSERKLVDQAREFSNDFDKLVFQAVDLSHMRPQSQTVPL 180 ENVFFL+IMADHAKFI HLLDPSERKLVD AR FSNDFD+L++QA+DL M+PQSQTVPL Sbjct: 154 ENVFFLRIMADHAKFIGHLLDPSERKLVDTARNFSNDFDELMYQAIDLESMKPQSQTVPL 213 Query: 181 LSQFVDENRVSVKSLRDFKKTARDLIEECRIKSIIHPLLADHVFREAERFLFILDMFDQS 240 L QF+D+NRVSV SLRDFKKTARDLIE+C++KSIIHPLLADHVFREA+RFL I+DMFD Sbjct: 214 LDQFLDQNRVSVTSLRDFKKTARDLIEQCKVKSIIHPLLADHVFREADRFLEIIDMFDAH 273 Query: 241 LSGVKVNKR 249 L+ +K R Sbjct: 274 LTNIKSQPR 282 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.324 0.139 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,427,219,404 Number of extensions: 56155401 Number of successful extensions: 173981 Number of sequences better than 1.0e-05: 192 Number of HSP's gapped: 173569 Number of HSP's successfully gapped: 197 Length of query: 253 Length of database: 3,060,696,203 Length adjustment: 133 Effective length of query: 120 Effective length of database: 1,807,701,208 Effective search space: 216924144960 Effective search space used: 216924144960 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 129 (54.3 bits)