BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0290.0051.p (604 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KG03.1 B3KG03_9BACI GTP-binding protein LepA 1103 0.0 B1DFE2.1 B1DFE2_9BACL GTP-binding protein LepA 1061 0.0 A7GT14.1 LEPA_BACCN GTP-binding protein lepA 951 0.0 C5D4U5.1 C5D4U5_9BACI GTP-binding protein LepA 950 0.0 C2MQV5.1 C2MQV5_BACCE GTP-binding protein lepA 948 0.0 >B3KG03.1 B3KG03_9BACI GTP-binding protein LepA Length = 605 Score = 1103 bits (2853), Expect = 0.0, Method: Compositional matrix adjust. Identities = 534/604 (88%), Positives = 568/604 (94%) Query: 1 MTDVQKRQQQIRNFSIIAHIDHGKSTLADRILEYTGALTSREMQEQVLDQMDLERERGIT 60 MTDVQ RQQ+IRNF IIAHIDHGKSTLADRILE+TGALTSREMQEQVLDQMDLERERGIT Sbjct: 1 MTDVQVRQQKIRNFCIIAHIDHGKSTLADRILEFTGALTSREMQEQVLDQMDLERERGIT 60 Query: 61 IKLQAVRLTYRADDGQEYLLNLIDTPGHVDFTYEVSRSLAACEGALLVVDAAQGIEAQTL 120 IKLQAVRL Y+ADDG+EY+LNLIDTPGHVDFTYEVSRSLAACEGALLVVDAAQGIEAQTL Sbjct: 61 IKLQAVRLNYKADDGEEYILNLIDTPGHVDFTYEVSRSLAACEGALLVVDAAQGIEAQTL 120 Query: 121 ANVYLALDNNLEILPVINKIDLPSADPERVKQEIEDVIGLDASEAVLASAKAGIGIKEIL 180 ANVYLALDNNLEILPVINKIDLPSADPERVKQE+EDVIGLDAS+AVLASAKAGIGIKEIL Sbjct: 121 ANVYLALDNNLEILPVINKIDLPSADPERVKQEVEDVIGLDASDAVLASAKAGIGIKEIL 180 Query: 181 EQVVKQVPAPSGTSDAPLKALIFDSHYDPYKGVIVYVRVIDGKIRAGSKIKMMATDKVFD 240 EQVV++VPAP+G S+ PLKALIFDSHYDPYKGVIVYVRVIDG I+AGSKIKMMAT K F+ Sbjct: 181 EQVVQKVPAPTGNSEEPLKALIFDSHYDPYKGVIVYVRVIDGSIKAGSKIKMMATGKTFE 240 Query: 241 VIEVGAFMPRMSIVEELNIGDVGFIVAGIKHVGDTRVGDTVTDAKNPTPEPLPGYRKINP 300 VIEVGAF PRMSIV+ELN+GDVGFIVAGIK VGDT+VGDTVTDAK PT EPLPGYRKINP Sbjct: 241 VIEVGAFKPRMSIVDELNVGDVGFIVAGIKSVGDTQVGDTVTDAKRPTAEPLPGYRKINP 300 Query: 301 MVYCGLYPIETSDYNDLREALEKLQLNDASLSFEPESSSAXXXXXXXXXXXXXHMEIIQE 360 MV+CGLYPIETSDYNDLREALEKLQLNDASLSFEPE+SSA HM++IQE Sbjct: 301 MVFCGLYPIETSDYNDLREALEKLQLNDASLSFEPETSSALGFGFRCGFLGLLHMDVIQE 360 Query: 361 RIEREFNLPLITTAPSVIYRIKLTNGETLQIDNPSHYPEIGTIDYVEEPYVKAGIIVPND 420 RIEREFN+PLITTAPSVIYRI TNGE +QIDNPSHYPE+G +DYVEEPYVKA IIVPND Sbjct: 361 RIEREFNIPLITTAPSVIYRITQTNGEQIQIDNPSHYPEVGKVDYVEEPYVKAAIIVPND 420 Query: 421 YVGTVMELCQNKRGEFVNMEYLDSNRVTITYQIPLSEIVYDFFDQLKSGTKGYASFDYEI 480 YVG +MELCQNKRGEFVNMEYLD+ RVTITY+IPLSEIVYDFFDQLKS TKGYASFDYE+ Sbjct: 421 YVGAIMELCQNKRGEFVNMEYLDTTRVTITYEIPLSEIVYDFFDQLKSSTKGYASFDYEL 480 Query: 481 SGYRQSNLVKMDILLNGEQVDALSFIVHRDRAYNRGRIICEKLRGIIPRQMFEVPIQASV 540 SGYR+SNLVKMDILLN EQVDALSFIVH+DRAY+RGR ICEKLR +IPRQMFEVPIQASV Sbjct: 481 SGYRRSNLVKMDILLNAEQVDALSFIVHKDRAYHRGRAICEKLRELIPRQMFEVPIQASV 540 Query: 541 GTKIVARETVKAMRKNVLAKCYGGDISRKRKLLEKQKEGKKRMKQVGSVEVPQEAFMAVL 600 GTK+VARETVKAMRKNVLAKCYGGDISRKRKLLEKQKEGKKRMKQVGSVEVPQEAFMAVL Sbjct: 541 GTKVVARETVKAMRKNVLAKCYGGDISRKRKLLEKQKEGKKRMKQVGSVEVPQEAFMAVL 600 Query: 601 KIDE 604 KID+ Sbjct: 601 KIDD 604 >B1DFE2.1 B1DFE2_9BACL GTP-binding protein LepA Length = 605 Score = 1061 bits (2745), Expect = 0.0, Method: Compositional matrix adjust. Identities = 508/604 (84%), Positives = 559/604 (92%) Query: 1 MTDVQKRQQQIRNFSIIAHIDHGKSTLADRILEYTGALTSREMQEQVLDQMDLERERGIT 60 MTDV+ RQ++IRNFSIIAHIDHGKSTLADRILE+TGAL+SREMQEQVLDQMDLERERGIT Sbjct: 1 MTDVRDRQKKIRNFSIIAHIDHGKSTLADRILEFTGALSSREMQEQVLDQMDLERERGIT 60 Query: 61 IKLQAVRLTYRADDGQEYLLNLIDTPGHVDFTYEVSRSLAACEGALLVVDAAQGIEAQTL 120 IKLQAVRLTY+ADDG+EYLLNLIDTPGHVDFTYEVSRS+AACEGALLVVDAAQGIEAQTL Sbjct: 61 IKLQAVRLTYKADDGEEYLLNLIDTPGHVDFTYEVSRSMAACEGALLVVDAAQGIEAQTL 120 Query: 121 ANVYLALDNNLEILPVINKIDLPSADPERVKQEIEDVIGLDASEAVLASAKAGIGIKEIL 180 ANVYLALDNNLEILPVINKIDLPSA+PERVKQEIEDVIGLDAS+AVLASAKAGIGIKEIL Sbjct: 121 ANVYLALDNNLEILPVINKIDLPSAEPERVKQEIEDVIGLDASDAVLASAKAGIGIKEIL 180 Query: 181 EQVVKQVPAPSGTSDAPLKALIFDSHYDPYKGVIVYVRVIDGKIRAGSKIKMMATDKVFD 240 EQVV++VPAP+G D PLKALIFDSHYDPYKGVIVYVRVIDG I+AG KI+ MAT F+ Sbjct: 181 EQVVQKVPAPTGNPDEPLKALIFDSHYDPYKGVIVYVRVIDGSIQAGKKIRFMATGAEFE 240 Query: 241 VIEVGAFMPRMSIVEELNIGDVGFIVAGIKHVGDTRVGDTVTDAKNPTPEPLPGYRKINP 300 VIEVGAF PRM IV+EL +GDVGF+VAGIK+V DTRVGDTVT+AK P PE LPGYRKINP Sbjct: 241 VIEVGAFKPRMGIVDELAVGDVGFVVAGIKNVKDTRVGDTVTEAKRPAPEALPGYRKINP 300 Query: 301 MVYCGLYPIETSDYNDLREALEKLQLNDASLSFEPESSSAXXXXXXXXXXXXXHMEIIQE 360 MVYCGLYPIET DYNDLREALEKL+LNDASL +EPE+S+A HMEIIQE Sbjct: 301 MVYCGLYPIETQDYNDLREALEKLELNDASLRYEPETSTALGFGFRCGFLGLLHMEIIQE 360 Query: 361 RIEREFNLPLITTAPSVIYRIKLTNGETLQIDNPSHYPEIGTIDYVEEPYVKAGIIVPND 420 RIEREFN+PLITTAPSVIYR+ LTNG ++IDNPS+YPE G +++VEEPYVKA +IVPND Sbjct: 361 RIEREFNIPLITTAPSVIYRVTLTNGTVMEIDNPSNYPEAGKLEFVEEPYVKASVIVPND 420 Query: 421 YVGTVMELCQNKRGEFVNMEYLDSNRVTITYQIPLSEIVYDFFDQLKSGTKGYASFDYEI 480 YVG +MELCQ KRGEFVNMEYLD+NRVT+TY+IPLSEIVYDFFDQLKS TKGYASFDYE+ Sbjct: 421 YVGAIMELCQGKRGEFVNMEYLDTNRVTLTYEIPLSEIVYDFFDQLKSSTKGYASFDYEL 480 Query: 481 SGYRQSNLVKMDILLNGEQVDALSFIVHRDRAYNRGRIICEKLRGIIPRQMFEVPIQASV 540 SGYR+SNLVKMDI+LN EQVDALS IVHRDRAY RGR+IC+K++ +IPRQMFEVP+QAS+ Sbjct: 481 SGYRRSNLVKMDIMLNNEQVDALSVIVHRDRAYQRGRVICQKMKELIPRQMFEVPVQASI 540 Query: 541 GTKIVARETVKAMRKNVLAKCYGGDISRKRKLLEKQKEGKKRMKQVGSVEVPQEAFMAVL 600 GTK++ARETVKAMRKNVLAKCYGGDISRKRKLL+KQKEGKKRMKQVGSVEVPQEAFMAVL Sbjct: 541 GTKVIARETVKAMRKNVLAKCYGGDISRKRKLLDKQKEGKKRMKQVGSVEVPQEAFMAVL 600 Query: 601 KIDE 604 KIDE Sbjct: 601 KIDE 604 >A7GT14.1 LEPA_BACCN GTP-binding protein lepA Length = 608 Score = 951 bits (2458), Expect = 0.0, Method: Compositional matrix adjust. Identities = 454/599 (75%), Positives = 524/599 (87%) Query: 6 KRQQQIRNFSIIAHIDHGKSTLADRILEYTGALTSREMQEQVLDQMDLERERGITIKLQA 65 KRQ +IRNFSIIAHIDHGKSTLADRILE T ALT REM+ Q+LD MDLERERGITIKL A Sbjct: 8 KRQSKIRNFSIIAHIDHGKSTLADRILEKTNALTQREMKAQLLDSMDLERERGITIKLNA 67 Query: 66 VRLTYRADDGQEYLLNLIDTPGHVDFTYEVSRSLAACEGALLVVDAAQGIEAQTLANVYL 125 V+LTY+A DG+EY+L+LIDTPGHVDFTYEVSRSLAACEGA+LVVDAAQGIEAQTLANVYL Sbjct: 68 VQLTYKAKDGEEYILHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYL 127 Query: 126 ALDNNLEILPVINKIDLPSADPERVKQEIEDVIGLDASEAVLASAKAGIGIKEILEQVVK 185 ALDN+LEILPVINKIDLPSADPERV+QE+EDVIGLDASEAVLASAKAGIGI+EILEQ+V+ Sbjct: 128 ALDNDLEILPVINKIDLPSADPERVRQEVEDVIGLDASEAVLASAKAGIGIEEILEQIVE 187 Query: 186 QVPAPSGTSDAPLKALIFDSHYDPYKGVIVYVRVIDGKIRAGSKIKMMATDKVFDVIEVG 245 +VPAP G + PL+ +IFDS YDPY+GVI Y+RV++G ++ G K++MMAT K F+V EVG Sbjct: 188 KVPAPDGDPEEPLQCMIFDSLYDPYRGVIAYIRVVNGTVKVGDKVRMMATGKEFEVTEVG 247 Query: 246 AFMPRMSIVEELNIGDVGFIVAGIKHVGDTRVGDTVTDAKNPTPEPLPGYRKINPMVYCG 305 F P+ + +EL +GDVGF+ A IK+VGDTRVGDT+T AK P EPLPGYRK+NPMV+CG Sbjct: 248 VFTPKTTQRDELTVGDVGFLAASIKNVGDTRVGDTITHAKRPAAEPLPGYRKLNPMVFCG 307 Query: 306 LYPIETSDYNDLREALEKLQLNDASLSFEPESSSAXXXXXXXXXXXXXHMEIIQERIERE 365 LYPI+T+ YNDLREALEKLQLND++L FEPE+S A HMEIIQERIERE Sbjct: 308 LYPIDTARYNDLREALEKLQLNDSALEFEPETSQALGFGFRCGFLGLLHMEIIQERIERE 367 Query: 366 FNLPLITTAPSVIYRIKLTNGETLQIDNPSHYPEIGTIDYVEEPYVKAGIIVPNDYVGTV 425 F + LITTAPSVIY++ LTNGE + +DNPS+ P+ +ID VEEPYVKA I+VPNDYVG V Sbjct: 368 FKIDLITTAPSVIYKVYLTNGEEIVVDNPSNMPDPQSIDRVEEPYVKASIMVPNDYVGAV 427 Query: 426 MELCQNKRGEFVNMEYLDSNRVTITYQIPLSEIVYDFFDQLKSGTKGYASFDYEISGYRQ 485 ME+CQ KRG F++M+YLD RVT+TY+IPLSEIVYDFFDQLKS TKGYASFDYE+ GY+ Sbjct: 428 MEICQGKRGTFIDMQYLDETRVTLTYEIPLSEIVYDFFDQLKSNTKGYASFDYELIGYQV 487 Query: 486 SNLVKMDILLNGEQVDALSFIVHRDRAYNRGRIICEKLRGIIPRQMFEVPIQASVGTKIV 545 S LVKMDILLNGEQVDALSFIVHRD AY+RG++I EKL+ +IPRQ FEVPIQA++G KIV Sbjct: 488 SKLVKMDILLNGEQVDALSFIVHRDSAYDRGKVIVEKLKELIPRQQFEVPIQAAIGNKIV 547 Query: 546 ARETVKAMRKNVLAKCYGGDISRKRKLLEKQKEGKKRMKQVGSVEVPQEAFMAVLKIDE 604 AR T+KAMRKNVLAKCYGGDISRKRKLLEKQKEGKKRMK VGSVEVPQEAFMAVL++D+ Sbjct: 548 ARSTIKAMRKNVLAKCYGGDISRKRKLLEKQKEGKKRMKSVGSVEVPQEAFMAVLRMDD 606 >C5D4U5.1 C5D4U5_9BACI GTP-binding protein LepA Length = 610 Score = 950 bits (2455), Expect = 0.0, Method: Compositional matrix adjust. Identities = 450/599 (75%), Positives = 525/599 (87%) Query: 6 KRQQQIRNFSIIAHIDHGKSTLADRILEYTGALTSREMQEQVLDQMDLERERGITIKLQA 65 KR+ +IRNFSIIAHIDHGKSTLADRILE TGAL+ REM+EQ LD M+LERERGITIKL A Sbjct: 9 KRRDRIRNFSIIAHIDHGKSTLADRILEKTGALSEREMREQTLDSMELERERGITIKLNA 68 Query: 66 VRLTYRADDGQEYLLNLIDTPGHVDFTYEVSRSLAACEGALLVVDAAQGIEAQTLANVYL 125 V+L Y+A +G+EY+ +LIDTPGHVDFTYEVSRSLAACEGA+LVVDAAQGIEAQTLANVYL Sbjct: 69 VQLKYKAKNGEEYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYL 128 Query: 126 ALDNNLEILPVINKIDLPSADPERVKQEIEDVIGLDASEAVLASAKAGIGIKEILEQVVK 185 ALDNNLEILPVINKIDLPSADPERV+QEIE+VIGLDASEAVLASAK GIGI+EILEQ+V+ Sbjct: 129 ALDNNLEILPVINKIDLPSADPERVRQEIEEVIGLDASEAVLASAKVGIGIEEILEQIVE 188 Query: 186 QVPAPSGTSDAPLKALIFDSHYDPYKGVIVYVRVIDGKIRAGSKIKMMATDKVFDVIEVG 245 ++PAPSG DAPLKALIFDS YD Y+GV+ Y+RV+DG ++ G KIKMM+T K F+V EVG Sbjct: 189 KIPAPSGDPDAPLKALIFDSMYDSYRGVVAYIRVMDGTVKPGQKIKMMSTGKEFEVAEVG 248 Query: 246 AFMPRMSIVEELNIGDVGFIVAGIKHVGDTRVGDTVTDAKNPTPEPLPGYRKINPMVYCG 305 F P+ +V+EL +GDVGF+ A IK+V DTRVGDT+TDA+NP EPLPGYRK+NPMV+CG Sbjct: 249 VFTPKPKLVDELTVGDVGFLTASIKNVSDTRVGDTITDAENPAAEPLPGYRKLNPMVFCG 308 Query: 306 LYPIETSDYNDLREALEKLQLNDASLSFEPESSSAXXXXXXXXXXXXXHMEIIQERIERE 365 +YPI+T+ YNDLREALEKLQLNDA+L FEPE+S A HMEIIQERIERE Sbjct: 309 MYPIDTARYNDLREALEKLQLNDAALHFEPETSQALGFGFRCGFLGLLHMEIIQERIERE 368 Query: 366 FNLPLITTAPSVIYRIKLTNGETLQIDNPSHYPEIGTIDYVEEPYVKAGIIVPNDYVGTV 425 FN+ LITTAPSV+Y++ LT+G +Q+DNPS+ P+ ID+VEEPYVKA I+VPNDYVG V Sbjct: 369 FNIDLITTAPSVVYKVYLTDGTEVQVDNPSNMPDPQKIDHVEEPYVKATIMVPNDYVGPV 428 Query: 426 MELCQNKRGEFVNMEYLDSNRVTITYQIPLSEIVYDFFDQLKSGTKGYASFDYEISGYRQ 485 MELCQ KRG FV+M+YLD RVT+ Y+IPLSEIVYDFFD LKS TKGYASFDYE+ GY+ Sbjct: 429 MELCQGKRGNFVDMQYLDEKRVTLIYEIPLSEIVYDFFDTLKSSTKGYASFDYELIGYKP 488 Query: 486 SNLVKMDILLNGEQVDALSFIVHRDRAYNRGRIICEKLRGIIPRQMFEVPIQASVGTKIV 545 S LVKMDILLNGE++DALSFIVHRD AY RG++I EKL+ +IPRQ FEVP+QA++G KI+ Sbjct: 489 SKLVKMDILLNGEKIDALSFIVHRDSAYERGKVIVEKLKDVIPRQQFEVPVQAAIGNKII 548 Query: 546 ARETVKAMRKNVLAKCYGGDISRKRKLLEKQKEGKKRMKQVGSVEVPQEAFMAVLKIDE 604 AR T+KA+RKNVLAKCYGGD+SRKRKLLEKQKEGKKRMKQ+GSVEVPQEAFMA+LKID+ Sbjct: 549 ARSTIKALRKNVLAKCYGGDVSRKRKLLEKQKEGKKRMKQIGSVEVPQEAFMAILKIDD 607 >C2MQV5.1 C2MQV5_BACCE GTP-binding protein lepA Length = 607 Score = 948 bits (2451), Expect = 0.0, Method: Compositional matrix adjust. Identities = 450/599 (75%), Positives = 524/599 (87%) Query: 6 KRQQQIRNFSIIAHIDHGKSTLADRILEYTGALTSREMQEQVLDQMDLERERGITIKLQA 65 KRQ +IRNFSIIAHIDHGKSTLADRILE T ALT REM+ Q+LD MDLERERGITIKL A Sbjct: 8 KRQSKIRNFSIIAHIDHGKSTLADRILEKTNALTQREMKAQLLDSMDLERERGITIKLNA 67 Query: 66 VRLTYRADDGQEYLLNLIDTPGHVDFTYEVSRSLAACEGALLVVDAAQGIEAQTLANVYL 125 V+L Y+A DG+EY+L+LIDTPGHVDFTYEVSRSLAACEGA+LVVDAAQGIEAQTLANVYL Sbjct: 68 VQLNYKAKDGEEYILHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYL 127 Query: 126 ALDNNLEILPVINKIDLPSADPERVKQEIEDVIGLDASEAVLASAKAGIGIKEILEQVVK 185 ALDNNLEILPVINKIDLPSADPERV+QE+EDVIGLDASEAVLASAKAGIGI+EILEQ+V+ Sbjct: 128 ALDNNLEILPVINKIDLPSADPERVRQEVEDVIGLDASEAVLASAKAGIGIEEILEQIVE 187 Query: 186 QVPAPSGTSDAPLKALIFDSHYDPYKGVIVYVRVIDGKIRAGSKIKMMATDKVFDVIEVG 245 +VPAP+G S+ PL+ +IFDS YDPY+GVI Y+RV++G ++ G K++MMAT K F+V EVG Sbjct: 188 KVPAPTGDSEEPLQCMIFDSLYDPYRGVIAYIRVVNGTVKVGDKVRMMATGKEFEVTEVG 247 Query: 246 AFMPRMSIVEELNIGDVGFIVAGIKHVGDTRVGDTVTDAKNPTPEPLPGYRKINPMVYCG 305 F P+ + +EL +GDVGF+ A IK+VGDTRVGDT+T AK P EPLPGYRK+NPMV+CG Sbjct: 248 VFTPKTTQRDELTVGDVGFLAASIKNVGDTRVGDTITHAKRPAAEPLPGYRKLNPMVFCG 307 Query: 306 LYPIETSDYNDLREALEKLQLNDASLSFEPESSSAXXXXXXXXXXXXXHMEIIQERIERE 365 LYPI+++ YNDLR+ALEKL+LND++L FEPE+S A HMEIIQERIERE Sbjct: 308 LYPIDSARYNDLRDALEKLELNDSALEFEPETSQALGFGFRCGFLGLLHMEIIQERIERE 367 Query: 366 FNLPLITTAPSVIYRIKLTNGETLQIDNPSHYPEIGTIDYVEEPYVKAGIIVPNDYVGTV 425 F + LITTAPSVIY++ LTNGE + +DNPS+ P+ TID VEEP+VKA I+VPNDYVG V Sbjct: 368 FKIDLITTAPSVIYKVFLTNGEDMIVDNPSNMPDPQTIDRVEEPFVKAAIMVPNDYVGAV 427 Query: 426 MELCQNKRGEFVNMEYLDSNRVTITYQIPLSEIVYDFFDQLKSGTKGYASFDYEISGYRQ 485 ME+CQ KRG F++M+YLD RVT+TY+IPLSEIVYDFFDQLKS TKGYASFDYE+ GY+ Sbjct: 428 MEICQGKRGTFIDMQYLDETRVTLTYEIPLSEIVYDFFDQLKSNTKGYASFDYELIGYKP 487 Query: 486 SNLVKMDILLNGEQVDALSFIVHRDRAYNRGRIICEKLRGIIPRQMFEVPIQASVGTKIV 545 S LVKMDILLN EQVDALSFIVHRD AY+RG++I EKL+ +IPRQ FEVPIQA++G K+V Sbjct: 488 SKLVKMDILLNSEQVDALSFIVHRDSAYDRGKVIVEKLKELIPRQQFEVPIQATIGNKVV 547 Query: 546 ARETVKAMRKNVLAKCYGGDISRKRKLLEKQKEGKKRMKQVGSVEVPQEAFMAVLKIDE 604 AR T+KAMRKNVLAKCYGGDISRKRKLL+KQKEGKKRMK VGSVEVPQEAFMAVLK+D+ Sbjct: 548 ARSTIKAMRKNVLAKCYGGDISRKRKLLDKQKEGKKRMKSVGSVEVPQEAFMAVLKMDD 606 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.137 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,375,855,493 Number of extensions: 142081835 Number of successful extensions: 463178 Number of sequences better than 1.0e-05: 14650 Number of HSP's gapped: 443699 Number of HSP's successfully gapped: 16032 Length of query: 604 Length of database: 3,060,696,203 Length adjustment: 142 Effective length of query: 462 Effective length of database: 1,722,912,073 Effective search space: 795985377726 Effective search space used: 795985377726 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 134 (56.2 bits)