BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0290.0023.p (815 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KFZ1.1 B3KFZ1_9BACI Leucyl-tRNA synthetase 1392 0.0 B1DFF5.1 B1DFF5_9BACL Leucyl-tRNA synthetase 1326 0.0 Q9K7S8.1 SYL_BACHD Leucyl-tRNA synthetase EC=6.1.1.4 1219 0.0 Q2B4K7.1 Q2B4K7_9BACI Leucyl-tRNA synthetase 1207 0.0 B4BPW9.1 B4BPW9_9BACI Leucyl-tRNA synthetase 1201 0.0 >B3KFZ1.1 B3KFZ1_9BACI Leucyl-tRNA synthetase Length = 813 Score = 1392 bits (3604), Expect = 0.0, Method: Compositional matrix adjust. Identities = 671/815 (82%), Positives = 723/815 (88%), Gaps = 2/815 (0%) Query: 1 MSDNNTPNTAAGYRAQTIEPKWQKFWDENKTFKTGEDAGKPKFYALDMFPYPSGAGLHVG 60 M+DN T GY+ Q IEPKWQ++WDENKTFKT E + KPKFYALDMFPYPSGAGLHVG Sbjct: 1 MTDNQP--TGHGYQPQAIEPKWQQYWDENKTFKTEETSSKPKFYALDMFPYPSGAGLHVG 58 Query: 61 HPEGYTATDIVSRYKRMRGYNVLHPMGWDAFGLPAEQYAMDTGQHPREITFKNIDNFRRQ 120 HPEGYTATDIVSRYKRMRGYNVLHPMGWDAFGLPAEQYAMDTG+HPRE T +NID FRRQ Sbjct: 59 HPEGYTATDIVSRYKRMRGYNVLHPMGWDAFGLPAEQYAMDTGKHPREFTVQNIDTFRRQ 118 Query: 121 IKSLGFSYDWDREISTTDPEYYKWTQWIFIQLYNRGLAYVAEVSVNWCEALGTVLANEEV 180 IKSLGFSYDWDREISTTDPEYYKWTQWIFIQLY RGLAYVAEV VNWCEALGTVLANEEV Sbjct: 119 IKSLGFSYDWDREISTTDPEYYKWTQWIFIQLYKRGLAYVAEVPVNWCEALGTVLANEEV 178 Query: 181 IDGKSERGGHPVVRRPMRQWILKITEYAXXXXXXXXXXXXXXSIKDMQRNWIGKSTGAEV 240 IDGKSERGGHPVVR+PMRQWIL+ITEYA S+KDMQRNWIGKSTGAEV Sbjct: 179 IDGKSERGGHPVVRKPMRQWILRITEYADRLLEDLDELDWSESLKDMQRNWIGKSTGAEV 238 Query: 241 TFAIAGHDASLEVFTTRPDTLFGASYCVLAPEHKLVDLITTEEQKAAVAEYRDKASRKSD 300 F I G+D LEVFTTRPDTLFGASYCVLAPEH LVD I T +Q+ AV Y+D+A+RKSD Sbjct: 239 RFDIEGYDGHLEVFTTRPDTLFGASYCVLAPEHDLVDKIATADQREAVKAYQDQAARKSD 298 Query: 301 LERTDLAKEKSGVFTGAYAVNPVNGAQVPVWIADYVLAGYGTGAIMAVPGHDSRDWEFAK 360 LERTDLAK+K+GVFTGAYAVNPVNGA+VP+WIADYVLAGYGTGAIMAVPGHDSRDWEFAK Sbjct: 299 LERTDLAKDKTGVFTGAYAVNPVNGAKVPIWIADYVLAGYGTGAIMAVPGHDSRDWEFAK 358 Query: 361 QFGLNILEVVQGGNVEEEAYSGDGPHVNSGFLNGLDNKEAIAKMIAWLEEKGSGKGKVTY 420 QFGL I+EVVQGGNVEEEAY+G G HVNSGFLNGLDN+ AI M WLE++G GK KVTY Sbjct: 359 QFGLPIIEVVQGGNVEEEAYTGTGAHVNSGFLNGLDNEAAIQAMNEWLEKEGKGKKKVTY 418 Query: 421 RLRDWLFSRQRYWGEPIPILHLEDGTMKTVPVDQLPLLLPEVDSIRPSGTGESPLANVTE 480 RLRDWLFSRQRYWGEPIPILHLEDGTMKTVP DQLPLLLP+VD I+PSGTGESPLANVTE Sbjct: 419 RLRDWLFSRQRYWGEPIPILHLEDGTMKTVPEDQLPLLLPDVDQIKPSGTGESPLANVTE 478 Query: 481 WVETIDPETGMKARRETNTMPQWAGSCWYYLRYIDPRNDKELCSPEKQKEWLPVDLYIGG 540 WVET+DPETGMKARRETNTMPQWAGSCWYYLRYIDP N ELCS EKQKEWLPVDLYIGG Sbjct: 479 WVETVDPETGMKARRETNTMPQWAGSCWYYLRYIDPDNHDELCSKEKQKEWLPVDLYIGG 538 Query: 541 AEHAVLHLLYARFWHKVLYDIGVVDTKEPFHKLVNQGMILGNNNEKMSKSRGNVINPDEI 600 EHAVLHLLYARFWHKVLYD+GVVDTKEPF KLVNQGMILGNNNEKMSKSRGNVINPD+I Sbjct: 539 VEHAVLHLLYARFWHKVLYDLGVVDTKEPFQKLVNQGMILGNNNEKMSKSRGNVINPDDI 598 Query: 601 VEAYGADTLRVYEMFMGPLEATKPWNEKGVEGIHRFLSRVWRLFVNEDGSISAKITQGGG 660 V YGADTLRVYEMFMGPLEATKPWN GVEG HRFLSRVWRLF+ +DG ++ KI G G Sbjct: 599 VNEYGADTLRVYEMFMGPLEATKPWNTNGVEGTHRFLSRVWRLFIGDDGQLNPKIVDGEG 658 Query: 661 TDEFKRTWHKTLKKVTEDFEQLRFNTAISQLMIFINDAYKQETLSTEAAEHFVQMLSPLA 720 TDEFKRT HKT+KKVT+DFE LRFNTAISQLMIFIN+ YK E L +A E+FVQ+LSPLA Sbjct: 659 TDEFKRTLHKTIKKVTDDFEHLRFNTAISQLMIFINEGYKSEVLPRKAMENFVQLLSPLA 718 Query: 721 PHIAEELWQLLGHEGSISYVAWPAYDEAWTVDAEVEIVVQVNGKIVQRALIPQDMGQEDM 780 PH+AEELW LG+ S++YV WP +DEAWTV+AEVEIVVQVNGKIV+RA I +DM QE M Sbjct: 719 PHLAEELWSRLGYTESVTYVPWPEFDEAWTVEAEVEIVVQVNGKIVERAKIAKDMDQEAM 778 Query: 781 QNHALSLPNVKTAIEGKTVRKIIAVPGKLVNIVVG 815 Q H+LSLPNVK A+EGK++RKIIAVPGKLVNIV G Sbjct: 779 QQHSLSLPNVKQALEGKSIRKIIAVPGKLVNIVAG 813 >B1DFF5.1 B1DFF5_9BACL Leucyl-tRNA synthetase Length = 811 Score = 1326 bits (3431), Expect = 0.0, Method: Compositional matrix adjust. Identities = 634/803 (78%), Positives = 705/803 (87%), Gaps = 1/803 (0%) Query: 12 GYRAQTIEPKWQKFWDENKTFKTGEDAGKPKFYALDMFPYPSGAGLHVGHPEGYTATDIV 71 GY +EPKWQK+WDENKTF T ED+GK KFYALDMFPYPSGAGLHVGHPEGYTATDIV Sbjct: 7 GYNPLAVEPKWQKYWDENKTFATTEDSGKKKFYALDMFPYPSGAGLHVGHPEGYTATDIV 66 Query: 72 SRYKRMRGYNVLHPMGWDAFGLPAEQYAMDTGQHPREITFKNIDNFRRQIKSLGFSYDWD 131 SRYKRMRGYNVLHPMGWDAFGLPAEQYA+ TG+HPREIT +NI+NFRRQIKSLGFSYDWD Sbjct: 67 SRYKRMRGYNVLHPMGWDAFGLPAEQYALQTGRHPREITVENINNFRRQIKSLGFSYDWD 126 Query: 132 REISTTDPEYYKWTQWIFIQLYNRGLAYVAEVSVNWCEALGTVLANEEVIDGKSERGGHP 191 RE STTDP+YYKWTQWIFIQLYN+GLAYVAEV VNWC ALGTVLANEEVIDG SERGGHP Sbjct: 127 REFSTTDPDYYKWTQWIFIQLYNKGLAYVAEVPVNWCPALGTVLANEEVIDGLSERGGHP 186 Query: 192 VVRRPMRQWILKITEYAXXXXXXXXXXXXXXSIKDMQRNWIGKSTGAEVTFAIAGHDASL 251 V+R+PMRQW+LKITEYA SIKDMQRNWIGKSTGAEVTF I GHDASL Sbjct: 187 VIRKPMRQWMLKITEYAERLLEDLEELDWSESIKDMQRNWIGKSTGAEVTFDIDGHDASL 246 Query: 252 EVFTTRPDTLFGASYCVLAPEHKLVDLITTEEQKAAVAEYRDKASRKSDLERTDLAKEKS 311 VFTTRPDTLFGA+YCVLAPEH+LV ITT +Q AV Y++ A+RKSDLERTDLAK+K+ Sbjct: 247 VVFTTRPDTLFGATYCVLAPEHELVATITTADQAQAVDAYKEAAARKSDLERTDLAKDKT 306 Query: 312 GVFTGAYAVNPVNGAQVPVWIADYVLAGYGTGAIMAVPGHDSRDWEFAKQFGLNILEVVQ 371 GVFTGAYA+NPVNGA+ P+WIADYVLAGYGTGAIMAVPGHD+RDWEFAKQF L ILEVVQ Sbjct: 307 GVFTGAYAINPVNGAKTPIWIADYVLAGYGTGAIMAVPGHDTRDWEFAKQFDLPILEVVQ 366 Query: 372 GGNVEEEAYSGDGPHVNSGFLNGLDNKEAIAKMIAWLEEKGSGKGKVTYRLRDWLFSRQR 431 GG+ +EAY+GDGPH NS FLNGL+N++AI MI LE G G GKVTYRLRDWLFSRQR Sbjct: 367 GGDATKEAYAGDGPHANSDFLNGLNNEDAIKTMIEHLEGSGKGHGKVTYRLRDWLFSRQR 426 Query: 432 YWGEPIPILHLEDGTMKTVPVDQLPLLLPEVDSIRPSGTGESPLANVTEWVETIDPETGM 491 YWGEPIPILHLEDGTMK VPVDQLPL+LP+VD+I+PSGTGESPLANVTEWV TIDPETGM Sbjct: 427 YWGEPIPILHLEDGTMKPVPVDQLPLVLPDVDAIKPSGTGESPLANVTEWVNTIDPETGM 486 Query: 492 KARRETNTMPQWAGSCWYYLRYIDPRNDKELCSPEKQKEWLPVDLYIGGAEHAVLHLLYA 551 KARRETNTMPQWAGSCWYYLR+IDP+N+ E+CSPEKQKEWLPVDLYIGGAEHAVLHLLYA Sbjct: 487 KARRETNTMPQWAGSCWYYLRFIDPKNENEICSPEKQKEWLPVDLYIGGAEHAVLHLLYA 546 Query: 552 RFWHKVLYDIGVVDTKEPFHKLVNQGMILGNNNEKMSKSRGNVINPDEIVEAYGADTLRV 611 RFWHKVLYD+GVVDTKEPFHKLVNQGMILG NNEKMSKSRGNVINPD+IV +GADTLR+ Sbjct: 547 RFWHKVLYDLGVVDTKEPFHKLVNQGMILGTNNEKMSKSRGNVINPDDIVNEFGADTLRM 606 Query: 612 YEMFMGPLEATKPWNEKGVEGIHRFLSRVWRLFVNEDGSISAKITQGGGTDE-FKRTWHK 670 YEMFMGPLEATKPWN GVEG +RFLSRVWRLFV EDGS++AKIT G T + FK+TWH+ Sbjct: 607 YEMFMGPLEATKPWNTNGVEGTYRFLSRVWRLFVGEDGSVNAKITNDGETTKAFKQTWHR 666 Query: 671 TLKKVTEDFEQLRFNTAISQLMIFINDAYKQETLSTEAAEHFVQMLSPLAPHIAEELWQL 730 ++KKVT+DFE LRFNTAISQLMIF+N+AYK + L EA ++F+QMLSPLAPHI EELW+ Sbjct: 667 SIKKVTDDFENLRFNTAISQLMIFVNEAYKTDVLPVEAMKNFLQMLSPLAPHITEELWEK 726 Query: 731 LGHEGSISYVAWPAYDEAWTVDAEVEIVVQVNGKIVQRALIPQDMGQEDMQNHALSLPNV 790 LG GSI+Y WP+Y+EA TVD EVEIVVQVNGKI++R I D + +M++ A + V Sbjct: 727 LGGTGSITYEQWPSYEEALTVDDEVEIVVQVNGKIIERVSIAADTAEAEMESLAKDMDKV 786 Query: 791 KTAIEGKTVRKIIAVPGKLVNIV 813 K IEGKT+RK++ V GKLVNIV Sbjct: 787 KELIEGKTIRKVVVVKGKLVNIV 809 >Q9K7S8.1 SYL_BACHD Leucyl-tRNA synthetase EC=6.1.1.4 Length = 806 Score = 1219 bits (3155), Expect = 0.0, Method: Compositional matrix adjust. Identities = 572/803 (71%), Positives = 669/803 (83%), Gaps = 1/803 (0%) Query: 12 GYRAQTIEPKWQKFWDENKTFKTGEDAGKPKFYALDMFPYPSGAGLHVGHPEGYTATDIV 71 + + IE KWQK+W+ENKTFKT ED + KFYALDMFPYPSGAGLHVGHPEGYTATDI+ Sbjct: 2 SFSHREIESKWQKYWEENKTFKTEEDETREKFYALDMFPYPSGAGLHVGHPEGYTATDIL 61 Query: 72 SRYKRMRGYNVLHPMGWDAFGLPAEQYAMDTGQHPREITFKNIDNFRRQIKSLGFSYDWD 131 SR KRM+GYNVLHPMGWDAFGLPAEQYA+DTG P E T KNI+ FRRQIKSLGFSYDWD Sbjct: 62 SRMKRMQGYNVLHPMGWDAFGLPAEQYAIDTGNSPAEFTEKNINTFRRQIKSLGFSYDWD 121 Query: 132 REISTTDPEYYKWTQWIFIQLYNRGLAYVAEVSVNWCEALGTVLANEEVIDGKSERGGHP 191 RE++TTDP+YYKWTQWIFIQLYN+GLAY+ EV+VNWC ALGTVLANEEVIDGKSERGGHP Sbjct: 122 REVNTTDPDYYKWTQWIFIQLYNKGLAYIDEVAVNWCPALGTVLANEEVIDGKSERGGHP 181 Query: 192 VVRRPMRQWILKITEYAXXXXXXXXXXXXXXSIKDMQRNWIGKSTGAEVTFAIAGHDASL 251 V RRPM+QW+LKITEYA SIKDMQRNWIG+S GAEVTF++ GHD ++ Sbjct: 182 VERRPMKQWMLKITEYADRLLEDLEELDWPESIKDMQRNWIGRSEGAEVTFSVDGHDDTI 241 Query: 252 EVFTTRPDTLFGASYCVLAPEHKLVDLITTEEQKAAVAEYRDKASRKSDLERTDLAKEKS 311 VFTTRPDTLFGA+Y VLAPEHKLVD ITT EQK AV Y+ + + KSDLERT+LAKEK+ Sbjct: 242 TVFTTRPDTLFGATYMVLAPEHKLVDAITTSEQKQAVESYKKEVATKSDLERTELAKEKT 301 Query: 312 GVFTGAYAVNPVNGAQVPVWIADYVLAGYGTGAIMAVPGHDSRDWEFAKQFGLNILEVVQ 371 GVFTGAYA+NPVNG +VP+WIADYVL YGTGAIMAVP HD RD+EFAK F L I EVV Sbjct: 302 GVFTGAYAINPVNGEKVPIWIADYVLVSYGTGAIMAVPAHDERDYEFAKTFDLPIKEVVS 361 Query: 372 GGNVEEEAYSGDGPHVNSGFLNGLDNKEAIAKMIAWLEEKGSGKGKVTYRLRDWLFSRQR 431 GG +E+EAY+GDGPHVNS FLNGL +EAI KMI WLE + G KVTYRLRDWLFSRQR Sbjct: 362 GGVIEQEAYTGDGPHVNSEFLNGLSKEEAIEKMIQWLEAEKKGTKKVTYRLRDWLFSRQR 421 Query: 432 YWGEPIPILHLEDGTMKTVPVDQLPLLLPEVDSIRPSGTGESPLANVTEWVETIDPETGM 491 YWGEPIP++H EDGTM TVP D+LPL LP++ I+PSGTGESPLAN T+W+E +DP TG Sbjct: 422 YWGEPIPVIHWEDGTMSTVPEDELPLELPKMSEIKPSGTGESPLANATDWLEVVDPVTGK 481 Query: 492 KARRETNTMPQWAGSCWYYLRYIDPRNDKELCSPEKQKEWLPVDLYIGGAEHAVLHLLYA 551 K RRETNTMPQWAGSCWYYLRYIDP N++ + PEK K+WLPVD+YIGGAEHAVLHLLYA Sbjct: 482 KGRRETNTMPQWAGSCWYYLRYIDPDNERMIADPEKLKKWLPVDIYIGGAEHAVLHLLYA 541 Query: 552 RFWHKVLYDIGVVDTKEPFHKLVNQGMILGNNNEKMSKSRGNVINPDEIVEAYGADTLRV 611 RFWHKVLYD+GVV TKEPF KL NQGMILG NNEKMSKS+GNV+NPD+I++++GADTLR+ Sbjct: 542 RFWHKVLYDLGVVPTKEPFQKLYNQGMILGENNEKMSKSKGNVVNPDDIIDSHGADTLRL 601 Query: 612 YEMFMGPLEATKPWNEKGVEGIHRFLSRVWRLFVNEDG-SISAKITQGGGTDEFKRTWHK 670 YEMFMGPL+A+ W+ G++G RFL RVWRL V+E+ S+KI G G+ E KR +H+ Sbjct: 602 YEMFMGPLDASIAWSTTGLDGARRFLDRVWRLLVDENTEEKSSKIVNGEGSPELKRAYHQ 661 Query: 671 TLKKVTEDFEQLRFNTAISQLMIFINDAYKQETLSTEAAEHFVQMLSPLAPHIAEELWQL 730 T+KKVTEDFE+LRFN ISQLM+++N+AYKQE L + AE FV++LSP+APH+AEELW Sbjct: 662 TVKKVTEDFEELRFNVGISQLMVYVNEAYKQEELPLDQAEGFVKLLSPVAPHLAEELWSK 721 Query: 731 LGHEGSISYVAWPAYDEAWTVDAEVEIVVQVNGKIVQRALIPQDMGQEDMQNHALSLPNV 790 LGHEG+I+Y WP YDEA+ V+ EVEIVVQ NGK+ + ++ +D +E M+ AL+ V Sbjct: 722 LGHEGTIAYEPWPTYDEAFLVEDEVEIVVQHNGKVRAKVVVAKDATKEQMEEAALANERV 781 Query: 791 KTAIEGKTVRKIIAVPGKLVNIV 813 K +I+GKTVRK+I VPGKLVNIV Sbjct: 782 KESIDGKTVRKVIVVPGKLVNIV 804 >Q2B4K7.1 Q2B4K7_9BACI Leucyl-tRNA synthetase Length = 805 Score = 1207 bits (3124), Expect = 0.0, Method: Compositional matrix adjust. Identities = 567/801 (70%), Positives = 655/801 (81%) Query: 13 YRAQTIEPKWQKFWDENKTFKTGEDAGKPKFYALDMFPYPSGAGLHVGHPEGYTATDIVS 72 + + IE KWQK W+ NKTFK GE+ GK FYALDMFPYPSGAGLHVGHPEGYTATDI+S Sbjct: 3 FNHREIEKKWQKSWEANKTFKMGEEKGKSNFYALDMFPYPSGAGLHVGHPEGYTATDILS 62 Query: 73 RYKRMRGYNVLHPMGWDAFGLPAEQYAMDTGQHPREITFKNIDNFRRQIKSLGFSYDWDR 132 R KRM+GYNVLHPMGWDAFGLPAEQYA+DTG P E T KNID FRRQIKSLGFSYDWDR Sbjct: 63 RVKRMQGYNVLHPMGWDAFGLPAEQYALDTGNDPAEFTKKNIDTFRRQIKSLGFSYDWDR 122 Query: 133 EISTTDPEYYKWTQWIFIQLYNRGLAYVAEVSVNWCEALGTVLANEEVIDGKSERGGHPV 192 EISTTDPEYYKWTQWIF +LY +GLAY+ EV+VNWC ALGTVLANEEVIDGKSERGGHPV Sbjct: 123 EISTTDPEYYKWTQWIFTKLYEKGLAYIDEVAVNWCPALGTVLANEEVIDGKSERGGHPV 182 Query: 193 VRRPMRQWILKITEYAXXXXXXXXXXXXXXSIKDMQRNWIGKSTGAEVTFAIAGHDASLE 252 RRPM+QW+LKIT Y S+KDMQRNWIG+S GAEVTF+I H+ + Sbjct: 183 ERRPMKQWMLKITAYGDRLLEDLEELDWPESLKDMQRNWIGRSEGAEVTFSIENHEGTFT 242 Query: 253 VFTTRPDTLFGASYCVLAPEHKLVDLITTEEQKAAVAEYRDKASRKSDLERTDLAKEKSG 312 VFTTRPDTLFGA+Y VLAPEH LV+ IT E++ AV Y +K KSDLERTDLAKEK+G Sbjct: 243 VFTTRPDTLFGATYAVLAPEHSLVESITAEDRVEAVEAYLEKVKSKSDLERTDLAKEKTG 302 Query: 313 VFTGAYAVNPVNGAQVPVWIADYVLAGYGTGAIMAVPGHDSRDWEFAKQFGLNILEVVQG 372 VFTGAYA+NPVNG ++P+WIADYVLA YGTGAIMAVP HD RD+EFAK+F L I EVV G Sbjct: 303 VFTGAYAINPVNGEKMPIWIADYVLASYGTGAIMAVPAHDERDYEFAKEFSLPIKEVVAG 362 Query: 373 GNVEEEAYSGDGPHVNSGFLNGLDNKEAIAKMIAWLEEKGSGKGKVTYRLRDWLFSRQRY 432 G++E+EAY+GDG HVNSGFL+GL +EAI+K I WLEEKG G KVTYRLRDWLFSRQRY Sbjct: 363 GDIEKEAYTGDGEHVNSGFLDGLQKEEAISKAIEWLEEKGIGTKKVTYRLRDWLFSRQRY 422 Query: 433 WGEPIPILHLEDGTMKTVPVDQLPLLLPEVDSIRPSGTGESPLANVTEWVETIDPETGMK 492 WGEPIPI+H EDGTM VP +LPL+LP+ IRPSGTGESPLAN+ EWV DPETG K Sbjct: 423 WGEPIPIIHWEDGTMTAVPESELPLMLPKTTEIRPSGTGESPLANIDEWVNVTDPETGKK 482 Query: 493 ARRETNTMPQWAGSCWYYLRYIDPRNDKELCSPEKQKEWLPVDLYIGGAEHAVLHLLYAR 552 RRETNTMPQWAGSCWYYLRYIDP+N+ + + KEWLPVD+YIGGAEHAVLHLLYAR Sbjct: 483 GRRETNTMPQWAGSCWYYLRYIDPKNENAIADADLLKEWLPVDIYIGGAEHAVLHLLYAR 542 Query: 553 FWHKVLYDIGVVDTKEPFHKLVNQGMILGNNNEKMSKSRGNVINPDEIVEAYGADTLRVY 612 FWHK LYDIGVV TKEPF KL NQGMILG NNEKMSKS+GNV+NPDEIVE++GADTLR+Y Sbjct: 543 FWHKFLYDIGVVSTKEPFQKLFNQGMILGENNEKMSKSKGNVVNPDEIVESHGADTLRLY 602 Query: 613 EMFMGPLEATKPWNEKGVEGIHRFLSRVWRLFVNEDGSISAKITQGGGTDEFKRTWHKTL 672 EMFMGPLEA+ W+ G++G RFL RVWRL ++ DG++ ++I ++ +H+T+ Sbjct: 603 EMFMGPLEASVAWSTNGLDGARRFLDRVWRLLIDTDGNLHSRIKDAEPESSLEKAYHQTV 662 Query: 673 KKVTEDFEQLRFNTAISQLMIFINDAYKQETLSTEAAEHFVQMLSPLAPHIAEELWQLLG 732 KKVTED+E LRFNTAISQLM+FIN+AYK ETL E FV+MLSP+APHIAEELW+ LG Sbjct: 663 KKVTEDYEGLRFNTAISQLMVFINEAYKAETLPVSYIEGFVKMLSPIAPHIAEELWEKLG 722 Query: 733 HEGSISYVAWPAYDEAWTVDAEVEIVVQVNGKIVQRALIPQDMGQEDMQNHALSLPNVKT 792 H G+ISY AWPAYDEA VD EVEIV+QVNGK+ + ++P D G+E ++ A+ ++ Sbjct: 723 HSGTISYEAWPAYDEAKLVDDEVEIVIQVNGKVKAKLMVPADAGREALEQIAMDDDKIQE 782 Query: 793 AIEGKTVRKIIAVPGKLVNIV 813 I+GKT+RK+IAVPGKLVNIV Sbjct: 783 QIDGKTIRKVIAVPGKLVNIV 803 >B4BPW9.1 B4BPW9_9BACI Leucyl-tRNA synthetase Length = 805 Score = 1201 bits (3106), Expect = 0.0, Method: Compositional matrix adjust. Identities = 559/802 (69%), Positives = 657/802 (81%) Query: 12 GYRAQTIEPKWQKFWDENKTFKTGEDAGKPKFYALDMFPYPSGAGLHVGHPEGYTATDIV 71 + + IE KWQ +W+++KTF+T +++ KPKFY LDMFPYPSGAGLHVGHPEGYTATDI+ Sbjct: 2 SFNHREIEKKWQDYWEQHKTFRTPDESDKPKFYVLDMFPYPSGAGLHVGHPEGYTATDIL 61 Query: 72 SRYKRMRGYNVLHPMGWDAFGLPAEQYAMDTGQHPREITFKNIDNFRRQIKSLGFSYDWD 131 +R KRM+GYNVLHPMGWDAFGLPAEQYA+DTG P E T KNIDNFRRQIKSLGFSYDWD Sbjct: 62 ARMKRMQGYNVLHPMGWDAFGLPAEQYALDTGNDPAEFTQKNIDNFRRQIKSLGFSYDWD 121 Query: 132 REISTTDPEYYKWTQWIFIQLYNRGLAYVAEVSVNWCEALGTVLANEEVIDGKSERGGHP 191 REI+TTDP YYKWTQWIF++LY +GLAY+ EV VNWC ALGTVLANEEVI+G+SERGGHP Sbjct: 122 REINTTDPNYYKWTQWIFLKLYEKGLAYMDEVPVNWCPALGTVLANEEVINGRSERGGHP 181 Query: 192 VVRRPMRQWILKITEYAXXXXXXXXXXXXXXSIKDMQRNWIGKSTGAEVTFAIAGHDASL 251 V+R+PMRQW+LKIT YA SIK+MQRNWIG+S GAE+ FA+ GHD S Sbjct: 182 VIRKPMRQWMLKITAYADRLLEDLEELDWPESIKEMQRNWIGRSEGAEIEFAVDGHDESF 241 Query: 252 EVFTTRPDTLFGASYCVLAPEHKLVDLITTEEQKAAVAEYRDKASRKSDLERTDLAKEKS 311 VFTTRPDTLFGA+Y VLAPEH LV+ ITT EQK AV Y + KSDLERTDLAKEK+ Sbjct: 242 TVFTTRPDTLFGATYAVLAPEHPLVEKITTPEQKPAVDAYLKEVQSKSDLERTDLAKEKT 301 Query: 312 GVFTGAYAVNPVNGAQVPVWIADYVLAGYGTGAIMAVPGHDSRDWEFAKQFGLNILEVVQ 371 GVFTGAYA++PV G ++P+WIADYVL GYGTGAIMAVP HD RD+EFAK F L I EVV Sbjct: 302 GVFTGAYAIHPVTGDKLPIWIADYVLMGYGTGAIMAVPAHDERDYEFAKTFNLPIKEVVA 361 Query: 372 GGNVEEEAYSGDGPHVNSGFLNGLDNKEAIAKMIAWLEEKGSGKGKVTYRLRDWLFSRQR 431 GGNVE E Y+GDG H+NS FLNGL+ +EAI KMIAWLEE G G+ KV+YRLRDWLFSRQR Sbjct: 362 GGNVENEPYTGDGEHINSEFLNGLNKQEAIEKMIAWLEENGKGQKKVSYRLRDWLFSRQR 421 Query: 432 YWGEPIPILHLEDGTMKTVPVDQLPLLLPEVDSIRPSGTGESPLANVTEWVETIDPETGM 491 YWGEPIP++H EDGTM TVP ++LPL+LP+ D I+PSGTGESPLAN+ EWV +DP+TG Sbjct: 422 YWGEPIPVIHWEDGTMTTVPEEELPLVLPKTDEIKPSGTGESPLANIEEWVNVVDPKTGK 481 Query: 492 KARRETNTMPQWAGSCWYYLRYIDPRNDKELCSPEKQKEWLPVDLYIGGAEHAVLHLLYA 551 K RRETNTMPQWAGSCWYYLRYIDP NDK+L PEK K+WLPVD+YIGGAEHAVLHLLYA Sbjct: 482 KGRRETNTMPQWAGSCWYYLRYIDPHNDKQLADPEKLKQWLPVDVYIGGAEHAVLHLLYA 541 Query: 552 RFWHKVLYDIGVVDTKEPFHKLVNQGMILGNNNEKMSKSRGNVINPDEIVEAYGADTLRV 611 RFWHKVLYD+G+V TKEPF KL NQGMILG NNEKMSKS+GNV+NPD+IVE++GADTLR+ Sbjct: 542 RFWHKVLYDLGIVPTKEPFQKLFNQGMILGENNEKMSKSKGNVVNPDDIVESHGADTLRL 601 Query: 612 YEMFMGPLEATKPWNEKGVEGIHRFLSRVWRLFVNEDGSISAKITQGGGTDEFKRTWHKT 671 YEMFMGPLEA+ W+ KG++G RFL RVWRLFV EDG ++ I D +R +H+T Sbjct: 602 YEMFMGPLEASIAWSTKGLDGARRFLERVWRLFVTEDGQLNPNIVDEPANDTLERVYHQT 661 Query: 672 LKKVTEDFEQLRFNTAISQLMIFINDAYKQETLSTEAAEHFVQMLSPLAPHIAEELWQLL 731 +KKVTED+E LRFNTAISQLM+FIN+AYK E + E E FV++LSP+ PHI EELWQ L Sbjct: 662 VKKVTEDYEALRFNTAISQLMVFINEAYKAEQMKKEYMEGFVKLLSPVCPHIGEELWQKL 721 Query: 732 GHEGSISYVAWPAYDEAWTVDAEVEIVVQVNGKIVQRALIPQDMGQEDMQNHALSLPNVK 791 GH +I+Y WP YDEA V+ VEIV+Q+NGK+ + +P D+ +E ++ AL+ +K Sbjct: 722 GHTDTIAYEPWPTYDEAKLVEDVVEIVIQINGKVRAKLNVPADLSKEALEERALADEKIK 781 Query: 792 TAIEGKTVRKIIAVPGKLVNIV 813 + GKTVRK+I VPGKLVNIV Sbjct: 782 EQLAGKTVRKVITVPGKLVNIV 803 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.135 0.418 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 5,308,841,574 Number of extensions: 240553064 Number of successful extensions: 550436 Number of sequences better than 1.0e-05: 6086 Number of HSP's gapped: 532826 Number of HSP's successfully gapped: 8970 Length of query: 815 Length of database: 3,060,696,203 Length adjustment: 144 Effective length of query: 671 Effective length of database: 1,704,070,043 Effective search space: 1143430998853 Effective search space used: 1143430998853 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 136 (57.0 bits)