BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0290.0008.p (481 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q53W80.1 Q53W80_THET8 Sugar ABC transporter, periplasmic sugar-b... 375 e-102 Q746L4.1 Q746L4_THET2 Sugar-binding protein 373 e-101 A3DE73.1 A3DE73_CLOTH Extracellular solute-binding protein, fami... 359 3e-97 A9B7H7.1 A9B7H7_HERA2 Extracellular solute-binding protein family 1 314 1e-83 B8CZK5.1 B8CZK5_HALOH Extracellular solute-binding protein family 1 203 3e-50 >Q53W80.1 Q53W80_THET8 Sugar ABC transporter, periplasmic sugar-binding protein Length = 434 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 193/418 (46%), Positives = 258/418 (61%), Gaps = 15/418 (3%) Query: 72 TLNAWVMPNSPKPDADFMKTLDPYLKEHPNVTVKVTVLDWGSAWTKITTAATSGEGPDLL 131 TL W+MPNSP+P DF + P+ K H V VKVTVLDWG AWTKITTAATSG GPDL Sbjct: 21 TLEVWIMPNSPQPAEDFKALVAPFEKAH-GVEVKVTVLDWGVAWTKITTAATSGVGPDLT 79 Query: 132 QLGSTWVPAIASMGGIDKVTDKVADVGGAEAFLPAIWKTTSIAGDSEVYGVPWFVDARAI 191 QLG+TWV AI++MG ++ V D + +GG +A+LPA+W+TT + G + VPWF + RA Sbjct: 80 QLGTTWVGAISAMGVLEPVDDVLEALGGEKAYLPAVWRTTRLEGARQATAVPWFSELRAF 139 Query: 192 YYRTDVFKQAGVNPETAFKDWDSFKSALEAVNGQTVDGKK----IAALGLPGKNDWNVVH 247 YYRTD K AGVNP F W F++ L + + + +A L PGKN W+V+H Sbjct: 140 YYRTDALKAAGVNPAEMFASWQGFEAGLARLKASSFRDPETKAPLAPLCTPGKNSWDVLH 199 Query: 248 NIFPWIWAAGGDVLSEDNKN--VIFNEEKGLKGVMFYTGLAHEGLVDKSSLEKNSSQIES 305 N PWIW AGG+++ + N + L+G+ F+ LA +G V SLEKN++QIE+ Sbjct: 200 NAAPWIWGAGGEIVRQAGGRWQSALNSPESLEGLYFFLSLAQKGYVPAESLEKNTAQIEA 259 Query: 306 DFGDGKSAVIISGPWLAKNFATPKANGGMDDKKAAKNFAVAPLPAGPGGQSTFVGGSELT 365 DF GK AV SGPW+ + P+A GG ++ AAKN VAP PAGP G+ TF GGS L Sbjct: 260 DFQAGKCAVFASGPWMIQRAQVPEAKGGFAERTAAKNLGVAPYPAGPKGRYTFFGGSNLA 319 Query: 366 VFSGSKNKEATWELIKYLTSDEAQKTYANVSGQLPTKLSILDAPDLDAN--MKAFSEATK 423 +F+ SKNK EL+KYL EAQ YA ++G LP S P N ++ F +A + Sbjct: 320 LFNFSKNKPLAKELLKYLGGPEAQVRYAQMTGMLPALRSAWSDPSFQQNPLLRTFIQAAQ 379 Query: 424 YGKTYPSIPQWGPTETALQKHFANIWDIVAGVKGKYSEESVKQELDSAASEVKAIINQ 481 +G+TYPS+ WG E +H WD+VA +G+ + E++K +D A+ A INQ Sbjct: 380 FGRTYPSLAGWGGVENLAVQHLGMAWDLVA--QGRLTREALKDLMDKAS----AAINQ 431 >Q746L4.1 Q746L4_THET2 Sugar-binding protein Length = 434 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 190/418 (45%), Positives = 258/418 (61%), Gaps = 15/418 (3%) Query: 72 TLNAWVMPNSPKPDADFMKTLDPYLKEHPNVTVKVTVLDWGSAWTKITTAATSGEGPDLL 131 TL W+MPNSP+P DF + P+ K H V VKVTVLDWG AWTKITTAATSG GPDL Sbjct: 21 TLEVWIMPNSPQPAEDFKALVAPFEKAH-GVEVKVTVLDWGVAWTKITTAATSGVGPDLT 79 Query: 132 QLGSTWVPAIASMGGIDKVTDKVADVGGAEAFLPAIWKTTSIAGDSEVYGVPWFVDARAI 191 QLG+TWV AI++MG ++ V D + +GG +A+LPA+W+TT + G + VPWF + RA Sbjct: 80 QLGTTWVGAISAMGVLEPVDDVLEALGGEKAYLPAVWRTTRLEGARQATAVPWFSELRAF 139 Query: 192 YYRTDVFKQAGVNPETAFKDWDSFKSALEAVNGQTVDGKK----IAALGLPGKNDWNVVH 247 YYRTD + AGVNP F W F++ L + + + +A L PGKN W+V+H Sbjct: 140 YYRTDALRAAGVNPAEMFASWQGFEAGLARLKASSFRDPETKAPLAPLCTPGKNSWDVLH 199 Query: 248 NIFPWIWAAGGDVLSEDNKN--VIFNEEKGLKGVMFYTGLAHEGLVDKSSLEKNSSQIES 305 N PW+W AGG+++ + N + L+G+ + LA +G V SLEKN++QIE+ Sbjct: 200 NAAPWVWGAGGEIVRQAGGRWQSALNSPESLEGLYLFLSLAQKGYVPAESLEKNTAQIEA 259 Query: 306 DFGDGKSAVIISGPWLAKNFATPKANGGMDDKKAAKNFAVAPLPAGPGGQSTFVGGSELT 365 DF GK AV SGPW+ + P++ GG ++ AAKN VAP PAGP G+ TF GGS L Sbjct: 260 DFQAGKCAVFASGPWMIQRAQVPESRGGFAERTAAKNLGVAPYPAGPKGRYTFFGGSNLA 319 Query: 366 VFSGSKNKEATWELIKYLTSDEAQKTYANVSGQLPTKLSILDAPDLDAN--MKAFSEATK 423 +F+ SKNK EL+KYL S EAQ YA ++G LP S P N ++ F +A + Sbjct: 320 LFNFSKNKPLAKELLKYLGSPEAQVRYAQMTGMLPGLRSAWSDPSFQQNPLLRTFIQAAQ 379 Query: 424 YGKTYPSIPQWGPTETALQKHFANIWDIVAGVKGKYSEESVKQELDSAASEVKAIINQ 481 +G+TYPS+ WG E +H WD+VA +G+ + E++K +D A+ A INQ Sbjct: 380 FGRTYPSLAGWGGVENLAVQHLGMAWDLVA--QGRLTREALKDLMDKAS----AAINQ 431 >A3DE73.1 A3DE73_CLOTH Extracellular solute-binding protein, family 1 Length = 459 Score = 359 bits (922), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 185/416 (44%), Positives = 254/416 (61%), Gaps = 10/416 (2%) Query: 69 EPVTLNAWVMPNSPKPDADFMKTLDPYLKEHPNVTVKVTVLDWGSAWTKITTAATSGEGP 128 +PV L W+MPNS PD D +K + P+ +P++TV+ TV+DW +A TKIT AATSGE P Sbjct: 48 DPVKLTMWIMPNSDTPDQDLLKVVKPFTDANPHITVEPTVVDWSAALTKITAAATSGEAP 107 Query: 129 DLLQLGSTWVPAIASM-GGIDKVTDKVADVGGAEAFLPAIWKTTSIAGDSEVYGVPWFVD 187 D+ Q+GSTW AI +M G + ++T K+ AF+ + ++ I G +++G+PWF + Sbjct: 108 DITQVGSTWTAAIGAMEGALVELTGKI----DTSAFVESTLQSAYIKGTDKMFGMPWFTE 163 Query: 188 ARAIYYRTDVFKQAGVNPETAFKDWDSFKSALEAVNGQTVDGKKIAALGLPGKNDWNVVH 247 RA++YR D ++AGVNPET F WD FK AL+ +NG VDGKK+ ALG+PGKNDWNVVH Sbjct: 164 TRALFYRKDACEKAGVNPETDFATWDKFKDALKKLNGIEVDGKKLVALGMPGKNDWNVVH 223 Query: 248 NIFPWIWAAGGDVLSEDNKNVIFNEEKGLKGVMFYTGLAHEGLVDKSSLEKNSSQIESDF 307 N WI+ AGGD ++E+ F+ E LKG+ FY+ LA EGL+D+ SLEKN+S IES F Sbjct: 224 NFSWWIYGAGGDFVNEEGTQATFSSENALKGIKFYSELAVEGLMDEPSLEKNTSDIESAF 283 Query: 308 GDGKSAVIISGPWLAKNFATPKANGGMDDKKAAKNFAVAPLPAGPGGQSTFVGGSELTVF 367 GDG A GPW+ ++ K G D V +P GP G+ F+GGS L +F Sbjct: 284 GDGAYATAFMGPWVISSYTKNKEENGND---LIDKIGVTMVPEGPAGRYAFMGGSNLVIF 340 Query: 368 SGSKNKEATWELIKYLTSDEAQKTYANVSGQLPTKLSILDAPDL-DANMKAFSEAT-KYG 425 + SKNK+ EL+K+ S EAQ Y+ VS LP + + P D+ MK F E KYG Sbjct: 341 NSSKNKDEAVELLKFFASKEAQVEYSKVSKMLPVVKAAYEDPYFEDSLMKVFKEQVDKYG 400 Query: 426 KTYPSIPQWGPTETALQKHFANIWDIVAGVKGKYSEESVKQELDSAASEVKAIINQ 481 K Y S+P W E + + IWD V V G YS + Q + S++ I+ + Sbjct: 401 KHYASVPGWASAEVIFSEGLSKIWDNVMEVDGAYSYDKTVQIVKDVESQINQILQE 456 >A9B7H7.1 A9B7H7_HERA2 Extracellular solute-binding protein family 1 Length = 486 Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 164/412 (39%), Positives = 234/412 (56%), Gaps = 6/412 (1%) Query: 71 VTLNAWVMPNSPKPDADFMKTLDPYLKEHPNVTVKVTVLDWGSAWTKITTAATSGEGPDL 130 VTL W MPN P +D + K +P + V+ +LDWG+A+ +I T+ GEGP + Sbjct: 76 VTLKLWHMPNGAAPADAIQAEIDAFEKANPGINVEPEMLDWGAAFQRIQTSVQGGEGPCI 135 Query: 131 LQLGSTWVPAIASMGGIDKVTDK-VADVGGAEAFLPAIWKTTSIAGDSEVYGVPWFVDAR 189 QLG+TW P A+MGG+ T++ + +GG+++F+ A W T+ + G + +PWF D R Sbjct: 136 TQLGTTWNPTFAAMGGLRPFTEEEITAMGGSDSFVAASWATSQLQGMEGTFSIPWFADVR 195 Query: 190 AIYYRTDVFKQAGVNPETAFKDWDSFKSALEAVNGQTVDGKKIAALGLPGKNDWNVVHNI 249 A+ YR D+ ++AG+ PE AFKDW SFK+ L + Q D +A + PG+NDWNV N Sbjct: 196 ALAYRKDLLEKAGLKPEEAFKDWASFKTTLATIQEQNPD---VAGIAFPGRNDWNVWQNS 252 Query: 250 FPWIWAAGGDVLSEDNKNVIFNEEKGLKGVMFYTGLAHEGLVDKSSLEKNSSQIESDFGD 309 WIW +GGD+LS D FN E + GV + L L ++LE NS+Q+++ FGD Sbjct: 253 SMWIWNSGGDLLSSDLSEATFNSEAAVAGVSEFANLYSSKLTVTNTLELNSAQVDASFGD 312 Query: 310 GKSAVIISGPWLAKNFATPKANGGMDDKKAAKNFAVAPLPAGPGGQSTFVGGSELTVFSG 369 G++ I+GPWL N T GG ++ A N A A PAGPGG TFVGGS L + Sbjct: 313 GRTFSAITGPWLISNARTAADAGGWANRTVADNLAYAEFPAGPGGSYTFVGGSNLAILKS 372 Query: 370 SKNKEATWELIKYLTSDEAQKTYANVSGQLP-TKLSILDAP-DLDANMKAFSEATKYGKT 427 +N +A + +++L ++E+Q Y+ G LP TK + DA DA F A GKT Sbjct: 373 CENADAAVKFVQFLAANESQLRYSQAIGMLPATKTAQADASIASDALYSVFIAAAAKGKT 432 Query: 428 YPSIPQWGPTETALQKHFANIWDIVAGVKGKYSEESVKQELDSAASEVKAII 479 I +WG E+ L + ++WD VA G S E VK LD AA V ++ Sbjct: 433 SAPIAEWGQVESVLNEQLGSLWDDVATAGGPVSAEVVKTRLDQAAQTVNELL 484 >B8CZK5.1 B8CZK5_HALOH Extracellular solute-binding protein family 1 Length = 423 Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 130/414 (31%), Positives = 205/414 (49%), Gaps = 26/414 (6%) Query: 73 LNAWVMPNSPKP-DADFMKTLDPYLKEHPNVTVKVTVLDWGSAWTKITTAATSGEGPDLL 131 + W M N+P + + +E + V + W S I+TA +GEG +++ Sbjct: 27 ITMWAMNNAPSELNIAWFNEKAAEFEELTGIKVNFEEIAWSSCMEVISTALATGEGANVM 86 Query: 132 QLGSTWVPAIASMGGIDKVTDKVADVGGAEAFLPAIWKTTSIAGDSEVYGVPWFVDARAI 191 Q+G+T P A+ GG+ ++ + + GG + F+ K+T + D + YGVPW + R + Sbjct: 87 QVGTTQTPFFAATGGLVEI--DIREFGGKDNFMEGNLKSTVL--DGKYYGVPWIAETRVL 142 Query: 192 YYRTDVFKQAGVNPETAFKDWDSFKSALEAVNGQTVDGKKIAALGLPGKNDWNVVHNIFP 251 +Y T++F++AGV P + W+ E + +G IA + G N W+++HN P Sbjct: 143 FYNTEMFEKAGVEPP---QTWEELIEVGEKIVDVYGEGTAIA---IAGTNAWDLIHNWAP 196 Query: 252 WIWAAGGDVLSEDNKNVIFN-EEKGLKGVMFYTGLAHEGLVDKSSLEKNSSQIESDFGDG 310 +W GGD L+ D K FN E G + V +Y L GL + E + SQ +S F +G Sbjct: 197 MLWTRGGDFLTPDWKRAAFNLSEAGYEAVEYYVDLVRNGLASTACAEYDQSQADSAFANG 256 Query: 311 KSAVIISGPWLAKNFATPKANGGMDDKKAAKNFAVAPLPAGPGGQSTFVGGSELTVFSGS 370 A+ GPW N + G+ + FA A LPAGP G+++F GGS L V + Sbjct: 257 DVAMAFQGPW---NIS------GIKNDNPDLPFAAAELPAGPYGRASFAGGSNLVVRKNA 307 Query: 371 KNK--EATWELIKYLTSDEAQKTYANVSGQLPTKLSILDAPDLDAN-MKAFSEATKYGKT 427 EA+ + IK+L SD Y +S LP P + M+ F ++ Y Sbjct: 308 PQDEIEASIKWIKFLLSDTNLTEYVKLSNMLPATKDAFSDPFFQSEIMQVFEKSLSYAHA 367 Query: 428 YPSIPQWGPTETALQKHFANIWDIVAGVKGKYSEESVKQELDSAASEVKAIINQ 481 YPS+P WG E A++ F NI + + G Y + + K+ LD+AA EV I+ + Sbjct: 368 YPSLPAWGEIELAMRTSFQNI--LTDYIDGVYDDNTAKKYLDAAALEVNNILKE 419 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.313 0.131 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,871,510,484 Number of extensions: 122843501 Number of successful extensions: 233155 Number of sequences better than 1.0e-05: 2099 Number of HSP's gapped: 231024 Number of HSP's successfully gapped: 2101 Length of query: 481 Length of database: 3,060,696,203 Length adjustment: 140 Effective length of query: 341 Effective length of database: 1,741,754,103 Effective search space: 593938149123 Effective search space used: 593938149123 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 133 (55.8 bits)