BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0284.0028.p (582 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q27R94.1 Q27R94_GEOTH Putative exo-xylanase 853 0.0 B7GGW1.1 B7GGW1_ANOFW Glycosyl hydrolase 828 0.0 B3KF33.1 B3KF33_9BACI Alpha-arabinofuranosidase II-like protein 576 e-162 A7VRA9.1 A7VRA9_9CLOT Putative uncharacterized protein 357 2e-96 A9U7B5.1 A9U7B5_PHYPA Predicted protein (Fragment) 265 9e-69 >Q27R94.1 Q27R94_GEOTH Putative exo-xylanase Length = 604 Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust. Identities = 397/581 (68%), Positives = 479/581 (82%) Query: 1 MVYAPKLAHSMHLAYSNDGLLFQELNHNSGVLFAKATENEDGTLRAKSLKNPYLFRTSEG 60 ++Y+ KLA+SMHLAYSNDG+ F+ LNHNSG+LFAKATENE+G+L AKSLKNPY+F +G Sbjct: 23 IIYSAKLAYSMHLAYSNDGINFEPLNHNSGILFAKATENENGSLNAKSLKNPYIFHLKDG 82 Query: 61 SFGVIAVRTEAEGEADAESKGEVLLFSSGDLLQYSEVGLLELKADTYVSDVSCEYDIGRK 120 +FGVIAVRT+ +G D ESKG+VL+FSS DLLQY E+GLL+LK +T+V+DV C YD +K Sbjct: 83 NFGVIAVRTKPDGTNDEESKGKVLIFSSPDLLQYKEIGLLDLKGNTFVNDVVCHYDDEKK 142 Query: 121 GYLIRWTDELGNGYQNFIADIMSLKGISAPEAARPFTLEPVLADIEGILPRNYIPVPKEI 180 YLI+W+D LGN Y N I DI++L IS P+ F L+ V IEGI+PRN I V +EI Sbjct: 143 VYLIKWSDGLGNYYMNLIEDIITLNHISDPKPIESFQLDSVQTKIEGIVPRNVIQVSEEI 202 Query: 181 ARRLCCKLTVPTNIAIEVPDRVTAASEEDVTAIRATALYSDGTQALKRVDWNTDEINWNQ 240 ARRL CKLTVPTNI IEVP++V +E+D+ ++A A+YSDGT KRV+W+ + I+W++ Sbjct: 203 ARRLICKLTVPTNIKIEVPEKVAVKTEKDLENVKAIAIYSDGTTDTKRVNWDKNGIDWSK 262 Query: 241 AGTYSITGEVHQDHYPFPVAFDRADPCIAKWKGKYYFIATNDADQNHTLYMREADTIPGL 300 GTY ITG V+QDHY FP+A DRADPCI KW GKYYFIATNDAD NH+LY++EADTIPGL Sbjct: 263 PGTYRITGTVYQDHYSFPIAIDRADPCITKWNGKYYFIATNDADGNHSLYIKEADTIPGL 322 Query: 301 VDAEEALILDSNTYEQIGGLLWAPEFHIIEDELYIFHAATPGEFLYEESQVMKLQAGGNP 360 VDAEE LILDS+TYE I GLLWAPEFHIIE +LYIFH AT F YE+S VMKL+ GGNP Sbjct: 323 VDAEEILILDSDTYEDIKGLLWAPEFHIIEGDLYIFHGATSNGFYYEQSHVMKLRKGGNP 382 Query: 361 MCAADWSMPRRVVKKDGTYLCEAGKTISLDMTVIQWNGQYYAAWSERQFVPVDLGAWIYI 420 +CA DWS P RVVKKDGTYLCEAGKTISLDMTVI+WN +YY WS+R+F+P DLGAW+YI Sbjct: 383 VCAKDWSRPYRVVKKDGTYLCEAGKTISLDMTVIKWNEEYYVVWSQREFIPEDLGAWLYI 442 Query: 421 ATIDPQEPWKLTSDPVLLTRPDYGWANNHTFVDEGPFALYTDDKLFLTFASAAVDATYVV 480 A +DP+EPW+L DPV+LT+P+YGW NN+ FV EGPFAL ++KLFLT++ + +D TYV+ Sbjct: 443 AKVDPKEPWRLVCDPVVLTKPEYGWENNNVFVVEGPFALIRNNKLFLTYSGSLIDETYVI 502 Query: 481 GLLTAGKGADLLDIRSWTKGNYPLLTSRSVPGEYGPGHNSYVTDEDGVIWNAYHARPGID 540 GLLTA KGADLL+ SWTK NYPLLTSRSVPGEYGPGHNSYV D+ G IWN YHARPGI Sbjct: 503 GLLTAEKGADLLNPASWTKCNYPLLTSRSVPGEYGPGHNSYVMDDYGTIWNVYHARPGIK 562 Query: 541 GPRSSGLRRVHFDIDGNPVLDLTEDKDLNRELKKVSIEVTV 581 GPRSSG+RRVHFDIDG P LDLTEDKDLNR+L KV+++V + Sbjct: 563 GPRSSGIRRVHFDIDGYPRLDLTEDKDLNRDLTKVAMDVIL 603 >B7GGW1.1 B7GGW1_ANOFW Glycosyl hydrolase Length = 607 Score = 828 bits (2139), Expect = 0.0, Method: Compositional matrix adjust. Identities = 379/581 (65%), Positives = 466/581 (80%) Query: 1 MVYAPKLAHSMHLAYSNDGLLFQELNHNSGVLFAKATENEDGTLRAKSLKNPYLFRTSEG 60 ++Y+ KLA SMHLAYS+DG F+ LNHN G+LFA+ATEN++G+L AKSLKNPY+F ++G Sbjct: 26 IIYSEKLACSMHLAYSDDGENFEPLNHNFGILFARATENDNGSLNAKSLKNPYIFYLADG 85 Query: 61 SFGVIAVRTEAEGEADAESKGEVLLFSSGDLLQYSEVGLLELKADTYVSDVSCEYDIGRK 120 +FGV+AVRTE++G D ESKG+VL+FSS DLLQY E+GLL+LK D +V+DV C YD +K Sbjct: 86 TFGVVAVRTESDGTNDEESKGKVLVFSSSDLLQYEEIGLLDLKGDAFVNDVVCNYDDEKK 145 Query: 121 GYLIRWTDELGNGYQNFIADIMSLKGISAPEAARPFTLEPVLADIEGILPRNYIPVPKEI 180 GY+I+W D LGN Y NFI DI+ L+ +S PE PF L + I+G++PRN I V +EI Sbjct: 146 GYIIKWNDHLGNYYMNFIGDILKLRDVSHPEPVEPFQLPSMRPKIQGVVPRNIIQVSEEI 205 Query: 181 ARRLCCKLTVPTNIAIEVPDRVTAASEEDVTAIRATALYSDGTQALKRVDWNTDEINWNQ 240 A RL CKLTVP NI +EVP++V +E D+ ++A A+YSD T +KRV WN ++I+W++ Sbjct: 206 AHRLICKLTVPVNIKMEVPEKVIVKTERDLENVKAIAIYSDNTTDIKRVKWNKNDIDWSR 265 Query: 241 AGTYSITGEVHQDHYPFPVAFDRADPCIAKWKGKYYFIATNDADQNHTLYMREADTIPGL 300 G Y +TG VHQD YPFP+A DRADPCI KW GKYYFIATNDAD NH+LY+READTIPGL Sbjct: 266 PGVYRVTGTVHQDRYPFPIAIDRADPCITKWNGKYYFIATNDADGNHSLYIREADTIPGL 325 Query: 301 VDAEEALILDSNTYEQIGGLLWAPEFHIIEDELYIFHAATPGEFLYEESQVMKLQAGGNP 360 V AEE LILDS TYE I GLLWAPEFHII ++LYIFH AT F YE+S VMKL+ GGNP Sbjct: 326 VHAEEILILDSETYEDIKGLLWAPEFHIIGNDLYIFHGATSDGFYYEQSHVMKLRRGGNP 385 Query: 361 MCAADWSMPRRVVKKDGTYLCEAGKTISLDMTVIQWNGQYYAAWSERQFVPVDLGAWIYI 420 CA DWS P RV+KKDGTYLCEAGKTISLDMTVI WN +YY WS+R+F+P DLGAW+YI Sbjct: 386 TCANDWSRPYRVLKKDGTYLCEAGKTISLDMTVIPWNEEYYVVWSQREFIPQDLGAWLYI 445 Query: 421 ATIDPQEPWKLTSDPVLLTRPDYGWANNHTFVDEGPFALYTDDKLFLTFASAAVDATYVV 480 A IDP EPWKL DP +LT+P+YGW NN+ FV EGPFAL D++LFLT++ + +D TYV+ Sbjct: 446 AKIDPNEPWKLVCDPTVLTKPEYGWENNNVFVVEGPFALIRDNRLFLTYSGSLIDETYVI 505 Query: 481 GLLTAGKGADLLDIRSWTKGNYPLLTSRSVPGEYGPGHNSYVTDEDGVIWNAYHARPGID 540 GLLTA KG+DL+D SW K NYPLLTS SV GEYGPGHNSY++D+ GVIWN YHARPGI Sbjct: 506 GLLTAEKGSDLMDPTSWKKCNYPLLTSMSVVGEYGPGHNSYISDDYGVIWNVYHARPGIK 565 Query: 541 GPRSSGLRRVHFDIDGNPVLDLTEDKDLNRELKKVSIEVTV 581 PRSSG+RRVHFDIDG P LDLTED+D+N++L K++I+V + Sbjct: 566 APRSSGIRRVHFDIDGYPRLDLTEDRDINKDLSKIAIDVVL 606 >B3KF33.1 B3KF33_9BACI Alpha-arabinofuranosidase II-like protein Length = 517 Score = 576 bits (1484), Expect = e-162, Method: Compositional matrix adjust. Identities = 276/500 (55%), Positives = 364/500 (72%), Gaps = 2/500 (0%) Query: 2 VYAPKLAHSMHLAYSNDGLLFQELNHNSGVLFAKATENEDGTLRAKSLKNPYLFRTSEGS 61 +Y+PKLA+SMHLAY+ DG+ ++ELNHNSGVLFAKA E + TL AKSLKNPYLF ++G+ Sbjct: 20 IYSPKLAYSMHLAYTEDGMSYRELNHNSGVLFAKAAELSNATLSAKSLKNPYLFHLADGN 79 Query: 62 FGVIAVRTEAEGEADAESKGEVLLFSSGDLLQYSEVGLLELKADTYVSDVSCEYDIGRKG 121 FGV+A+RTEA+G D +SKG VLLF+S DLLQY E+GLL L +V D+ CEY+ + Sbjct: 80 FGVLAIRTEADGSPDQQSKGSVLLFTSPDLLQYRELGLLNLTNGLHVQDIMCEYEHASRR 139 Query: 122 YLIRWTDELGNGYQNFIADIMSLKGISAPEAARPFTLEPVLADIEGILPRNYIPVPKEIA 181 Y++RW +E G YQ +AD+ + P+ FTL P DIEG +PRN I V + +A Sbjct: 140 YILRWREEDGRYYQREMADVTCPDDAAKPKPCEAFTLSPRRVDIEGAVPRNAIRVSRGVA 199 Query: 182 RRLCCKLTVPTNIAIEVPDRVTAASEEDVTAIRATALYSDGTQALKRVDWNTDEINWNQA 241 +RL KLTVP ++ E+P+RV S+E + A++ TA+YSDGT A+K ++W+ EI+W++ Sbjct: 200 QRLIHKLTVPVHVRNELPERVAVTSKEQLQAVKVTAIYSDGTTAIKPIEWDASEIDWSRP 259 Query: 242 GTYSITGEVHQDHYPFPVAFDRADPCIAKWKGKYYFIATNDADQNHTLYMREADTIPGLV 301 GTY I+G + QD Y FP+A +RADPCIA+W G+YYF+ATNDAD NHT+ +READ+I GLV Sbjct: 260 GTYRISGSIRQDRYTFPMATNRADPCIAQWDGRYYFVATNDADGNHTISIREADSIFGLV 319 Query: 302 DAEEALILDSNTYEQIGGLLWAPEFHIIEDELYIFHAATPGEFLYEESQVMKLQAGGNPM 361 AEE ILD+ ++ + LWAPE H I +LYIF A GEF +S VM+L+ GGNP Sbjct: 320 SAEETKILDTGMHDHLKRFLWAPELHGIGGDLYIFLAGCSGEFKDIQSHVMRLKNGGNPR 379 Query: 362 CAADWSMPRRVVKKDGTYLCEAGKTISLDMTVIQWNGQYYAAWSERQFVPVDLGAWIYIA 421 AADW P RV + DG+ L +AG I+LDMTV++ G+ Y W++R+ VP DLG+WIYIA Sbjct: 380 MAADWGTPIRVARNDGSPLFQAG--ITLDMTVLERKGRLYVLWAQRELVPHDLGSWIYIA 437 Query: 422 TIDPQEPWKLTSDPVLLTRPDYGWANNHTFVDEGPFALYTDDKLFLTFASAAVDATYVVG 481 DP+EPW+L S+PVLL++PDYGWANN TFV+EGPFAL TD K+F+T + A VDATY VG Sbjct: 438 EADPREPWRLLSEPVLLSKPDYGWANNQTFVEEGPFALMTDRKIFVTISGALVDATYCVG 497 Query: 482 LLTAGKGADLLDIRSWTKGN 501 +L+ ADLLD WTK N Sbjct: 498 MLSVNSDADLLDPNQWTKRN 517 >A7VRA9.1 A7VRA9_9CLOT Putative uncharacterized protein Length = 597 Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 225/605 (37%), Positives = 330/605 (54%), Gaps = 57/605 (9%) Query: 6 KLAHSMHLAYSNDGLLFQELNHNSGVLFAKATENEDGTL--RAKSLKNPYLFRTSEGSFG 63 +L +MHLA + Q L + +G+LFAKA NE G L K L+ P++FR +G+FG Sbjct: 15 ELESAMHLAAVLENGSLQPLQNGTGILFAKAEFNE-GPLCGTTKILRKPWVFRLKDGAFG 73 Query: 64 VIAVRTEAEGEADAESKGEVLLFSSGDLLQYSEVGLLELKAD-TYVSDVSCEYDIGRKG- 121 V+ +R G + + VL+F+S DLL + E GL+ + T V+DV C++D G+ G Sbjct: 74 VVCLRRNVGGGLEPGKENCVLIFTSPDLLSFREEGLIPAAPEGTAVADVRCQWD-GKAGL 132 Query: 122 YLIRWTDELGNGYQNFIADIMSLKGISAPEAARPFTLEPVLADIEGILP----------- 170 Y + W+D G Y + D+ S G+ + P L + ++G L Sbjct: 133 YQLTWSDGTGY-YTSSSPDLTSFTGMEKTGSPEPRALVKLSDGVDGCLISLTQEEYEKVL 191 Query: 171 RNYIPVPKEIARRLCCKLTVPTNIAIEVPDRVTAASEEDVTAIRATALYSDGTQALKRVD 230 R Y PV + + CK +++ P++VT YSDG+ V Sbjct: 192 RRYSPVVQTGCLPVYCKAAPGERVSL--PEQVTLT-------------YSDGSLKPMPVK 236 Query: 231 WNTDEINWNQAGTYSITGEVHQDHYPFPVAFDRADPCIAKWKGKYYFIATNDADQNHTLY 290 W + + G YS+ G V ++ +PFP +RADP + +++G+YY++AT+D + TL Sbjct: 237 W--EPFSRTLPGVYSVAGAVQRETWPFPFLEERADPTVIRYRGRYYYMATDDGNGQTTLK 294 Query: 291 MREADTIPGLVDAEEALILDSNTYEQIGGLLWAPEFHIIEDELYIFHAATPGEFLYEESQ 350 +R +DTI GL +AEE +I +N + G LWAPE H++ L +F AA + + Sbjct: 295 IRGSDTISGLAEAEERVIFTANPEGYMSGCLWAPEPHVVNGRLCVFFAAGNPHWYTVQCH 354 Query: 351 VMKLQAGGNPMCAADWSMPRRVVKKDGTYLCEAGKTISLDMTVIQWNGQYYAAWSER--- 407 VM + AG +P+ AA W P+R +G LC G I+LDMT Y W++R Sbjct: 355 VM-VMAGDDPLDAASWQTPQRCRTIEGGVLCPDG--ITLDMTCFTVGQVPYVVWAQRVMR 411 Query: 408 ----QFVPVDLGAWIYIATIDPQEPWKLTSDPVLLTRPDYGWANNHTFVDEGPFALYTDD 463 +F DL YIA++DP++PW+LTS PV + RP YGW T VDEGPFA+ D Sbjct: 412 LEEQEFGNSDL----YIASVDPEKPWQLTSAPVCICRPSYGWDRVDTTVDEGPFAVRRGD 467 Query: 464 KLFLTFASAAVDATYVVGLLTAGKGADLLDIRSWTKGNYPLLTSRSVPGEYGPGHNSYVT 523 LFLTFA ++V Y VGLL A G++LLD SW + YP+LTS SVPG+ GPGHNS+ Sbjct: 468 DLFLTFAGSSVSVLYCVGLLHAKTGSNLLDPESWEELGYPILTSESVPGQLGPGHNSFAK 527 Query: 524 DEDGVIWNAYHAR-PGIDG------PRSSGLRRVHFDIDGNPVLDLTEDKDLNRELK-KV 575 DE G AYHA+ P DG R +GLR VH+D +G P LD+T +++L+ + + Sbjct: 528 DEFGNDIVAYHAKLPAADGHDPGMTNRHTGLRPVHWDAEGLPRLDMTPERELSPGFQIQA 587 Query: 576 SIEVT 580 +E+T Sbjct: 588 VVEIT 592 >A9U7B5.1 A9U7B5_PHYPA Predicted protein (Fragment) Length = 226 Score = 265 bits (677), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 125/197 (63%), Positives = 153/197 (77%) Query: 1 MVYAPKLAHSMHLAYSNDGLLFQELNHNSGVLFAKATENEDGTLRAKSLKNPYLFRTSEG 60 ++YA +LA+SMHLAYS +G FQ LNHNSGVLFAKAT +++GTLRAKSLKNPYLFR ++G Sbjct: 30 IIYASRLAYSMHLAYSENGRDFQALNHNSGVLFAKATNHDNGTLRAKSLKNPYLFRMADG 89 Query: 61 SFGVIAVRTEAEGEADAESKGEVLLFSSGDLLQYSEVGLLELKADTYVSDVSCEYDIGRK 120 FGV+AVRTEA+G+ D ES+G VL F+SGDLLQY E+GL++LK+D Y DV+ EYD + Sbjct: 90 KFGVVAVRTEADGQQDEESRGAVLFFTSGDLLQYQEIGLVDLKSDVYAHDVAYEYDESSQ 149 Query: 121 GYLIRWTDELGNGYQNFIADIMSLKGISAPEAARPFTLEPVLADIEGILPRNYIPVPKEI 180 Y+IRW+D G YQN I D+ L G PE A FTLE V ADIEG+ PRN I VP+E Sbjct: 150 AYVIRWSDGKGGSYQNKIQDLYDLAGAGTPEKAEAFTLEAVSADIEGVQPRNVIRVPRET 209 Query: 181 ARRLCCKLTVPTNIAIE 197 A+RL C+LTVP NIAIE Sbjct: 210 AQRLVCRLTVPENIAIE 226 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.136 0.415 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,840,896,932 Number of extensions: 174977505 Number of successful extensions: 347846 Number of sequences better than 1.0e-05: 201 Number of HSP's gapped: 347335 Number of HSP's successfully gapped: 204 Length of query: 582 Length of database: 3,060,696,203 Length adjustment: 141 Effective length of query: 441 Effective length of database: 1,732,333,088 Effective search space: 763958891808 Effective search space used: 763958891808 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 134 (56.2 bits)